FFCP PHASE1:Hg19::chr11:72414402..72414429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116985 | |EntrezGene=116985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16925 | |HGNC=16925 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001osw.1_5end | |association_with_transcript=0bp_to_uc001osw.1_5end | ||
|cluster_id=chr11:72414402..72414429,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_12_at_ARAP1_5end | |description=CAGE_peak_12_at_ARAP1_5end | ||
|id=chr11:72414402..72414429,- | |id=chr11:72414402..72414429,- | ||
|ontology_enrichment_celltype=CL:0000057!1.13e-10!75;CL:0000055!4.36e-09!180 | |ontology_enrichment_celltype=CL:0000057!1.13e-10!75;CL:0000055!4.36e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0002549;1.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,1.12e-07,2;CL:0000057,9.21e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.97e-16!115;UBERON:0000475!5.63e-09!365 | |ontology_enrichment_uberon=UBERON:0007023!9.97e-16!115;UBERON:0000475!5.63e-09!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.35e-09;2!UBERON:0002757;7.35e-09;2!UBERON:0010134;7.35e-09;2!UBERON:0005408;7.35e-09;2!UBERON:0001899;7.35e-09;2!UBERON:0005629;1.32e-07;2!UBERON:0005358;1.32e-07;2!UBERON:0001886;1.32e-07;2!UBERON:0004086;1.32e-07;2!UBERON:0005282;1.32e-07;2!UBERON:0005281;1.32e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.39e-09,2;UBERON:0002757,7.39e-09,2;UBERON:0010134,7.39e-09,2;UBERON:0005408,7.39e-09,2;UBERON:0001899,7.39e-09,2;UBERON:0005629,1.12e-07,2;UBERON:0005358,1.12e-07,2;UBERON:0001886,1.12e-07,2;UBERON:0004086,1.12e-07,2;UBERON:0005282,1.12e-07,2;UBERON:0005281,1.12e-07,2 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.895037932904712,1.0843174571537,0,0.144846518960824,0,0.486634870302636,0.567208902984407,0,0.351339142772504,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0,0.264818361626438,0.860509862246441,0.354668382198357,1.12135520028461,0,0,1.24484414159907,0,0,1.05950199351452,1.72852777344,0.234321431833797,0,0,0.298897361103602,0,0,0.140450806702248,1.02077085627447,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0.277064115484183,0,1.5324389789951,0.150238058906597,0,0.358779271377724,1.2813443329114,0.635795703478686,0,0.412210116953756,0.772921620136887,0.930584281657949,0.168776332241266,0,0.757301322732344,2.39329736469978,6.62748832957129,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,2.94017422771084,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,4.88359444852299,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0,0,0,0,0.117141414992713,0.902838299183157,2.27407504055985,1.03473071292505,0,0,0.868836144680828,0.391602314925481,1.02943027143257,0,0,0,0,0,0,1.48864684691266,0,0,0.256278298511402,0.511707249066704,0,0,0,2.30830242907065,0.739144404124282,0,0.348631135379878,0,0,0,0,0,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0.170453254832202,2.75999310504886,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0,0,0.539617372749944,0,0.353437207037059,0.202182481573316,0,0,1.46290121726877,0,0,0.272999822815972,0.424216295861138,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,3.58882980006029,3.62224382255892,0,2.0996083214699,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,1.00035336054936,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,1.83309043480088,0,0,0,0.269604531922708,3.21031058919516,0,0,0,0,0.394584402849391,2.41981432097328,0,0.252746318513952,0,0,0,0,0,0,0,0,0.694238953340524,0,0,2.44617335538842,0,0,0,0,0.678923115418936,0,1.35588444468319,0,0,0.253243183823515,0,0,0.640358984218058,0,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0,0,0,0,0,0,0.558564802544508,0.687481272035051,0,0.599037001496973,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0,0,0,0,0.121499113316049,0,0.394028536495991,0.577000469484979,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.372578417648301,0,0,0,0,0,0,0,1.49254802886874,0.934853239388898,0.554805861502613,0.189403005275089,0,0,0,0.756154618816195,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0,0,0,1.03018711554838,2.02049693259551,1.26184898228651,0,1.28664954824955,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,4.23211132428821,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.317079050969534,0,0,0.992422356778588,0,0,14.4639495687137,18.8318884442541,0,0,1.1531308121143,0,0,0.339848664884159,0.131545547125698,0,0,0.470958557103084,0.157115589916002,0,4.56579360254748,0,0,1.07214816264985,1.58013611732727,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,0.423387050190929,0.68732060563215,0,0,0.111855431797792,0,0,0,0.513314034281235,1.1598144313382,0,0,0,0,0,0,0,0,0.874238242015829,0,1.71603825227734,0,0,0,2.113278637917,0.169927114687817,0.845855261818682,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0.407948941145488,0,1.0580536810308,0,1.38652688589425,2.59575937274273,0,0.218531143927391,0.126698501011437,0,0,0,0,0.378893491091197,0,0,0,0.852935927603924,1.66645102024618,0,0.0620747142958579,0,0.190941474834495,0.404234377916439,0.217716747896961,0.684466602170562,0.134704106029175,0.143444410785353,0.665320713092027,0,0.106727345877715,0,0,2.34640942403454,1.22241444182866,4.0689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| |phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.895037932904712,1.0843174571537,0,0.144846518960824,0,0.486634870302636,0.567208902984407,0,0.351339142772504,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0,0.264818361626438,0.860509862246441,0.354668382198357,1.12135520028461,0,0,1.24484414159907,0,0,1.05950199351452,1.72852777344,0.234321431833797,0,0,0.298897361103602,0,0,0.140450806702248,1.02077085627447,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0.277064115484183,0,1.5324389789951,0.150238058906597,0,0.358779271377724,1.2813443329114,0.635795703478686,0,0.412210116953756,0.772921620136887,0.930584281657949,0.168776332241266,0,0.757301322732344,2.39329736469978,6.62748832957129,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,2.94017422771084,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,4.88359444852299,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0,0,0,0,0.117141414992713,0.902838299183157,2.27407504055985,1.03473071292505,0,0,0.868836144680828,0.391602314925481,1.02943027143257,0,0,0,0,0,0,1.48864684691266,0,0,0.256278298511402,0.511707249066704,0,0,0,2.30830242907065,0.739144404124282,0,0.348631135379878,0,0,0,0,0,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0.170453254832202,2.75999310504886,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0,0,0.539617372749944,0,0.353437207037059,0.202182481573316,0,0,1.46290121726877,0,0,0.272999822815972,0.424216295861138,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,3.58882980006029,3.62224382255892,0,2.0996083214699,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,1.00035336054936,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,1.83309043480088,0,0,0,0.269604531922708,3.21031058919516,0,0,0,0,0.394584402849391,2.41981432097328,0,0.252746318513952,0,0,0,0,0,0,0,0,0.694238953340524,0,0,2.44617335538842,0,0,0,0,0.678923115418936,0,1.35588444468319,0,0,0.253243183823515,0,0,0.640358984218058,0,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0,0,0,0,0,0,0.558564802544508,0.687481272035051,0,0.599037001496973,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0,0,0,0,0.121499113316049,0,0.394028536495991,0.577000469484979,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.372578417648301,0,0,0,0,0,0,0,1.49254802886874,0.934853239388898,0.554805861502613,0.189403005275089,0,0,0,0.756154618816195,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0,0,0,1.03018711554838,2.02049693259551,1.26184898228651,0,1.28664954824955,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,4.23211132428821,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.317079050969534,0,0,0.992422356778588,0,0,14.4639495687137,18.8318884442541,0,0,1.1531308121143,0,0,0.339848664884159,0.131545547125698,0,0,0.470958557103084,0.157115589916002,0,4.56579360254748,0,0,1.07214816264985,1.58013611732727,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,0.423387050190929,0.68732060563215,0,0,0.111855431797792,0,0,0,0.513314034281235,1.1598144313382,0,0,0,0,0,0,0,0,0.874238242015829,0,1.71603825227734,0,0,0,2.113278637917,0.169927114687817,0.845855261818682,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0.407948941145488,0,1.0580536810308,0,1.38652688589425,2.59575937274273,0,0.218531143927391,0.126698501011437,0,0,0,0,0.378893491091197,0,0,0,0.852935927603924,1.66645102024618,0,0.0620747142958579,0,0.190941474834495,0.404234377916439,0.217716747896961,0.684466602170562,0.134704106029175,0.143444410785353,0.665320713092027,0,0.106727345877715,0,0,2.34640942403454,1.22241444182866,4.0689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| ||
|short_description=p12@ARAP1 | |short_description=p12@ARAP1 | ||
}} | }} |
Latest revision as of 01:25, 20 September 2015
Short description: | p12@ARAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ARAP1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_uc001osw.1_5end |
EntrezGene: | ARAP1 |
HGNC: | 16925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 1.12e-07 | 2 |
fibroblast | 9.21e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.39e-09 | 2 |
regional part of epithalamus | 7.39e-09 | 2 |
secretory circumventricular organ | 7.39e-09 | 2 |
circumventricular organ | 7.39e-09 | 2 |
epithalamus | 7.39e-09 | 2 |
vascular plexus | 1.12e-07 | 2 |
ventricle of nervous system | 1.12e-07 | 2 |
choroid plexus | 1.12e-07 | 2 |
brain ventricle | 1.12e-07 | 2 |
ventricular system of brain | 1.12e-07 | 2 |
ventricular system of central nervous system | 1.12e-07 | 2 |