FFCP PHASE1:Hg19::chr11:75525814..75525846,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000531263_5end | |association_with_transcript=0bp_to_ENST00000531263_5end | ||
|cluster_id=chr11:75525814..75525846,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_ENST00000531263_5end | |description=CAGE_peak_1_at_ENST00000531263_5end | ||
|id=chr11:75525814..75525846,- | |id=chr11:75525814..75525846,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002593;1.21e-13;2!CL:0002567;1.53e-09;3!CL:0000306;1.80e-07;4!CL:0002222;1.80e-07;4!CL:0002224;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.55e-13,2;CL:0002567,1.41e-09,3;CL:0000306,1.80e-07,4;CL:0002222,1.80e-07,4;CL:0002224,1.80e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.89e-11;10!UBERON:0005564;4.89e-11;10 | |||
|ontology_enrichment_disease=DOID:0050687!6.55e-08!143 | |ontology_enrichment_disease=DOID:0050687!6.55e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.80e-07;4!DOID:1612;1.80e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.59e-07,4;DOID:1612,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000955!2.17e-09!69;UBERON:0006238!2.17e-09!69;UBERON:0001049!9.09e-09!57;UBERON:0005068!9.09e-09!57;UBERON:0006241!9.09e-09!57;UBERON:0007135!9.09e-09!57;UBERON:0003056!1.02e-08!61;UBERON:0003080!1.22e-08!42;UBERON:0003075!2.77e-08!86;UBERON:0007284!2.77e-08!86;UBERON:0002616!3.36e-08!59;UBERON:0002346!4.53e-08!90;UBERON:0002780!6.45e-08!41;UBERON:0001890!6.45e-08!41;UBERON:0006240!6.45e-08!41;UBERON:0000073!1.53e-07!94;UBERON:0001016!1.53e-07!94;UBERON:0007023!1.56e-07!115;UBERON:0005743!6.11e-07!86 | |ontology_enrichment_uberon=UBERON:0000955!2.17e-09!69;UBERON:0006238!2.17e-09!69;UBERON:0001049!9.09e-09!57;UBERON:0005068!9.09e-09!57;UBERON:0006241!9.09e-09!57;UBERON:0007135!9.09e-09!57;UBERON:0003056!1.02e-08!61;UBERON:0003080!1.22e-08!42;UBERON:0003075!2.77e-08!86;UBERON:0007284!2.77e-08!86;UBERON:0002616!3.36e-08!59;UBERON:0002346!4.53e-08!90;UBERON:0002780!6.45e-08!41;UBERON:0001890!6.45e-08!41;UBERON:0006240!6.45e-08!41;UBERON:0000073!1.53e-07!94;UBERON:0001016!1.53e-07!94;UBERON:0007023!1.56e-07!115;UBERON:0005743!6.11e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.21e-13;2!UBERON:0000473;1.51e-13;8!UBERON:0003135;4.03e-10;11!UBERON:0010077;1.80e-07;4!UBERON:0005389;1.80e-07;4!UBERON:0000484;1.80e-07;4!UBERON:0000965;1.80e-07;4!UBERON:0001803;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.51e-13,8;UBERON:0002456,1.55e-13,2;UBERON:0003135,4.03e-10,11;UBERON:0010077,1.80e-07,4;UBERON:0005389,1.80e-07,4;UBERON:0000484,1.80e-07,4;UBERON:0002546,1.80e-07,4;UBERON:0000965,1.80e-07,4;UBERON:0001803,1.80e-07,4;UBERON:0003073,1.80e-07,4;UBERON:0005426,1.80e-07,4 | |||
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|short_description=p1@ENST00000531263 | |short_description=p1@ENST00000531263 | ||
}} | }} |
Latest revision as of 02:37, 24 July 2015
Short description: | p1@ENST00000531263 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000531263_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000531263_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.55e-13 | 2 |
light melanocyte | 1.41e-09 | 3 |
crystallin accumulating cell | 1.80e-07 | 4 |
vertebrate lens cell | 1.80e-07 | 4 |
lens epithelial cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 1.51e-13 | 8 |
internal thoracic artery | 1.55e-13 | 2 |
male reproductive organ | 4.03e-10 | 11 |
cuboidal epithelium | 1.80e-07 | 4 |
transparent eye structure | 1.80e-07 | 4 |
simple cuboidal epithelium | 1.80e-07 | 4 |
cranial placode | 1.80e-07 | 4 |
lens of camera-type eye | 1.80e-07 | 4 |
epithelium of lens | 1.80e-07 | 4 |
lens placode | 1.80e-07 | 4 |
lens vesicle | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.59e-07 | 4 |
breast cancer | 1.59e-07 | 4 |