FFCP PHASE1:Hg19::chr11:7626993..7627017,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8495 | |EntrezGene=8495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9250 | |HGNC=9250 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMU1 | |UniProt=E9PMU1 | ||
|association_with_transcript=24bp_to_ENST00000530181_5end | |association_with_transcript=24bp_to_ENST00000530181_5end | ||
|cluster_id=chr11:7626993..7627017,+ | |||
|coexpression_cluster_id=C258 | |coexpression_cluster_id=C258 | ||
|description=CAGE_peak_9_at_PPFIBP2_5end | |description=CAGE_peak_9_at_PPFIBP2_5end | ||
|id=chr11:7626993..7627017,+ | |id=chr11:7626993..7627017,+ | ||
|ontology_enrichment_celltype=CL:0002541!4.07e-07!3 | |ontology_enrichment_celltype=CL:0002541!4.07e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.22e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.64e-10;2 | |||
|ontology_enrichment_disease=DOID:305!1.63e-11!106;DOID:299!1.63e-08!25;DOID:0050687!2.32e-08!143 | |ontology_enrichment_disease=DOID:305!1.63e-11!106;DOID:299!1.63e-08!25;DOID:0050687!2.32e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!2.16e-14!129;UBERON:0004185!2.16e-14!129;UBERON:0005409!9.34e-14!35;UBERON:0000160!5.77e-13!27;UBERON:0001007!1.74e-12!155;UBERON:0001555!1.74e-12!155;UBERON:0007026!1.74e-12!155;UBERON:0004119!6.34e-12!169;UBERON:0000925!6.34e-12!169;UBERON:0006595!6.34e-12!169;UBERON:0000077!1.02e-09!130;UBERON:0000059!1.11e-08!11;UBERON:0006947!2.12e-07!3;UBERON:0004054!2.12e-07!3;UBERON:0000476!4.07e-07!3;UBERON:0000920!4.07e-07!3;UBERON:0009497!5.78e-07!25;UBERON:0000015!5.78e-07!25;UBERON:0002423!5.78e-07!25;UBERON:0006235!5.78e-07!25;UBERON:0004161!5.78e-07!25;UBERON:0004907!6.83e-07!5 | |ontology_enrichment_uberon=UBERON:0004921!2.16e-14!129;UBERON:0004185!2.16e-14!129;UBERON:0005409!9.34e-14!35;UBERON:0000160!5.77e-13!27;UBERON:0001007!1.74e-12!155;UBERON:0001555!1.74e-12!155;UBERON:0007026!1.74e-12!155;UBERON:0004119!6.34e-12!169;UBERON:0000925!6.34e-12!169;UBERON:0006595!6.34e-12!169;UBERON:0000077!1.02e-09!130;UBERON:0000059!1.11e-08!11;UBERON:0006947!2.12e-07!3;UBERON:0004054!2.12e-07!3;UBERON:0000476!4.07e-07!3;UBERON:0000920!4.07e-07!3;UBERON:0009497!5.78e-07!25;UBERON:0000015!5.78e-07!25;UBERON:0002423!5.78e-07!25;UBERON:0006235!5.78e-07!25;UBERON:0004161!5.78e-07!25;UBERON:0004907!6.83e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;8.16e-23;22!UBERON:0000160;4.77e-20;17!UBERON:0006947;3.09e-15;3!UBERON:0004054;3.09e-15;3!UBERON:0004921;2.63e-13;33!UBERON:0001155;3.00e-13;9!UBERON:0005904;1.50e-11;4!UBERON:0000059;8.64e-11;11!UBERON:0003135;1.11e-10;11!UBERON:0003101;1.01e-09;22!UBERON:0000079;1.01e-09;22!UBERON:0002108;4.38e-09;4!UBERON:0000058;6.86e-08;10!UBERON:0003124;1.24e-07;3!UBERON:0000920;1.24e-07;3!UBERON:0002110;3.18e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.02e-20,17;UBERON:0005409,4.79e-20,25;UBERON:0006947,2.81e-15,3;UBERON:0004054,2.81e-15,3;UBERON:0001155,2.57e-13,9;UBERON:0004921,9.41e-13,118;UBERON:0001007,6.82e-12,145;UBERON:0001555,6.82e-12,145;UBERON:0007026,6.82e-12,145;UBERON:0005904,1.40e-11,4;UBERON:0000059,7.63e-11,11;UBERON:0003135,1.16e-10,11;UBERON:0004119,2.64e-10,160;UBERON:0000925,2.64e-10,160;UBERON:0006595,2.64e-10,160;UBERON:0003101,1.06e-09,22;UBERON:0000079,1.06e-09,22;UBERON:0002108,4.39e-09,4;UBERON:0001046,1.75e-08,19;UBERON:0000920,1.22e-07,3;UBERON:0002110,3.38e-07,3;UBERON:0006242,3.38e-07,3;UBERON:0003929,5.89e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.538842688278752,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,1.04574548582567,0.518305275076852,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,5.53447973444011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,5.07609688284813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,2.61996756571508,0,0,0,0,1.67121139316383,0.890894042497916,0,0,0,0,0,0,0,2.76283915531148,0,0,0,0,0.0898683511473268,3.22238114416096,0,4.14302303675121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38338342632836,3.59030577639089,5.10642648033438,6.38002319463839,0.457987967009312,7.99552164027952,0,0,0,0,0,0,0,0,0.843992258112108,2.28525931422807,4.80600442875399,0,3.98104772431402,7.34197785377715,5.49927130440263,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,9.47002566838537,2.41981432097328,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.174118413160805,1.57254001417827,0,0.580537987734511,0.292357268344742,0.0821154570532092,0,0,0,0,0,0,2.15106521008283,0,4.90941887900511,0,2.88180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.9385418298834,0.393915911536118,0.247247575143499,0.13480708770837,4.4292366681637,0,0,0,0.160753148465019,0,0,0,0,0,0,1.65491985328316,0.944182586429966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1736865170934,1.40963004463334,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.376051641746286,0,3.90757005616546,3.40478702825849,0,0,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0.79832133146375,0,0,0,0,0,0,2.43328587836593,0,0.840816489941367,0.913158720509496,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,11.4314503551551,0,0,0,0.559277158988962,0.196300467230486,10.1191877735284,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,8.02611244322624,1.31135736302374,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0.240724100067505,2.92134555298607,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,2.27336094654718,3.48353369203032,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,4.66029741929859,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.538842688278752,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,1.04574548582567,0.518305275076852,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,5.53447973444011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,5.07609688284813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,2.61996756571508,0,0,0,0,1.67121139316383,0.890894042497916,0,0,0,0,0,0,0,2.76283915531148,0,0,0,0,0.0898683511473268,3.22238114416096,0,4.14302303675121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38338342632836,3.59030577639089,5.10642648033438,6.38002319463839,0.457987967009312,7.99552164027952,0,0,0,0,0,0,0,0,0.843992258112108,2.28525931422807,4.80600442875399,0,3.98104772431402,7.34197785377715,5.49927130440263,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,9.47002566838537,2.41981432097328,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.174118413160805,1.57254001417827,0,0.580537987734511,0.292357268344742,0.0821154570532092,0,0,0,0,0,0,2.15106521008283,0,4.90941887900511,0,2.88180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.9385418298834,0.393915911536118,0.247247575143499,0.13480708770837,4.4292366681637,0,0,0,0.160753148465019,0,0,0,0,0,0,1.65491985328316,0.944182586429966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1736865170934,1.40963004463334,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.376051641746286,0,3.90757005616546,3.40478702825849,0,0,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0.79832133146375,0,0,0,0,0,0,2.43328587836593,0,0.840816489941367,0.913158720509496,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,11.4314503551551,0,0,0,0.559277158988962,0.196300467230486,10.1191877735284,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,8.02611244322624,1.31135736302374,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0.240724100067505,2.92134555298607,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,2.27336094654718,3.48353369203032,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,4.66029741929859,0,0 | ||
|short_description=p9@PPFIBP2 | |short_description=p9@PPFIBP2 | ||
}} | }} |
Latest revision as of 07:34, 20 September 2015
Short description: | p9@PPFIBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PPFIBP2_5end |
Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
Association with transcript: | 24bp_to_ENST00000530181_5end |
EntrezGene: | PPFIBP2 |
HGNC: | 9250 |
UniProt: | E9PMU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.02e-20 | 17 |
gastrointestinal system | 4.79e-20 | 25 |
male genital duct | 2.81e-15 | 3 |
internal male genitalia | 2.81e-15 | 3 |
colon | 2.57e-13 | 9 |
subdivision of digestive tract | 9.41e-13 | 118 |
digestive system | 6.82e-12 | 145 |
digestive tract | 6.82e-12 | 145 |
primitive gut | 6.82e-12 | 145 |
duct of male reproductive system | 1.40e-11 | 4 |
large intestine | 7.63e-11 | 11 |
male reproductive organ | 1.16e-10 | 11 |
endoderm-derived structure | 2.64e-10 | 160 |
endoderm | 2.64e-10 | 160 |
presumptive endoderm | 2.64e-10 | 160 |
male organism | 1.06e-09 | 22 |
male reproductive system | 1.06e-09 | 22 |
small intestine | 4.39e-09 | 4 |
hindgut | 1.75e-08 | 19 |
egg chorion | 1.22e-07 | 3 |
gallbladder | 3.38e-07 | 3 |
gall bladder primordium | 3.38e-07 | 3 |
gut epithelium | 5.89e-07 | 54 |