FFCP PHASE1:Hg19::chr17:80416563..80416597,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:80416563..80416597,+
|short_description=p2@NARF
|description=CAGE_peak_2_at_NARF_5end
|association_with_transcript=0bp_to_ENST00000412079_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26502 | |EntrezGene=26502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29916 | |HGNC=29916 | ||
|TSSclassifier=strong | |||
|UniProt=B4DZZ6 | |UniProt=B4DZZ6 | ||
|association_with_transcript=0bp_to_ENST00000412079_5end | |||
|cluster_id=chr17:80416563..80416597,+ | |||
|description=CAGE_peak_2_at_NARF_5end | |||
|id=chr17:80416563..80416597,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.17e-09!94;UBERON:0001016!9.17e-09!94;UBERON:0001017!2.12e-08!82;UBERON:0001049!2.27e-08!57;UBERON:0005068!2.27e-08!57;UBERON:0006241!2.27e-08!57;UBERON:0007135!2.27e-08!57;UBERON:0002020!2.55e-08!34;UBERON:0003528!2.55e-08!34;UBERON:0005743!2.62e-08!86;UBERON:0002346!4.34e-08!90;UBERON:0001869!4.82e-08!32;UBERON:0002619!1.00e-07!22;UBERON:0002791!1.52e-07!33;UBERON:0003056!1.63e-07!61;UBERON:0003075!2.18e-07!86;UBERON:0007284!2.18e-07!86;UBERON:0003080!2.51e-07!42;UBERON:0001893!2.55e-07!34;UBERON:0000956!2.72e-07!25;UBERON:0000203!2.72e-07!25;UBERON:0000955!2.89e-07!69;UBERON:0006238!2.89e-07!69;UBERON:0000025!2.90e-07!194;UBERON:0002616!3.99e-07!59;UBERON:0002780!4.62e-07!41;UBERON:0001890!4.62e-07!41;UBERON:0006240!4.62e-07!41;UBERON:0001950!5.11e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.34e-07;22!UBERON:0002791;1.77e-07;32!UBERON:0001869;2.26e-07;32!UBERON:0003528;3.60e-07;34!UBERON:0002020;3.60e-07;34!UBERON:0000956;4.15e-07;25!UBERON:0000203;4.15e-07;25!UBERON:0001950;7.09e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.11e-09,86;UBERON:0001016,1.32e-08,89;UBERON:0003075,1.71e-08,82;UBERON:0007284,1.71e-08,82;UBERON:0003528,2.55e-08,34;UBERON:0002020,2.55e-08,34;UBERON:0002791,3.23e-08,32;UBERON:0001017,3.67e-08,81;UBERON:0001049,4.13e-08,56;UBERON:0005068,4.13e-08,56;UBERON:0006241,4.13e-08,56;UBERON:0007135,4.13e-08,56;UBERON:0001869,4.82e-08,32;UBERON:0000073,7.34e-08,53;UBERON:0002616,7.34e-08,53;UBERON:0002619,1.00e-07,22;UBERON:0003056,1.30e-07,61;UBERON:0001893,2.55e-07,34;UBERON:0000956,2.72e-07,25;UBERON:0000203,2.72e-07,25;UBERON:0000025,3.24e-07,192;UBERON:0002780,4.62e-07,41;UBERON:0001890,4.62e-07,41;UBERON:0003080,4.62e-07,41;UBERON:0006240,4.62e-07,41;UBERON:0000955,4.97e-07,68;UBERON:0006238,4.97e-07,68;UBERON:0001950,5.11e-07,20 | |||
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1616 | ||
|short_description=p2@NARF | |||
}} | }} |
Latest revision as of 12:54, 18 September 2015
Short description: | p2@NARF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NARF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412079_5end |
EntrezGene: | NARF |
HGNC: | 29916 |
UniProt: | B4DZZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.11e-09 | 86 |
nervous system | 1.32e-08 | 89 |
neural plate | 1.71e-08 | 82 |
presumptive neural plate | 1.71e-08 | 82 |
brain grey matter | 2.55e-08 | 34 |
gray matter | 2.55e-08 | 34 |
regional part of telencephalon | 3.23e-08 | 32 |
central nervous system | 3.67e-08 | 81 |
neural tube | 4.13e-08 | 56 |
neural rod | 4.13e-08 | 56 |
future spinal cord | 4.13e-08 | 56 |
neural keel | 4.13e-08 | 56 |
cerebral hemisphere | 4.82e-08 | 32 |
regional part of nervous system | 7.34e-08 | 53 |
regional part of brain | 7.34e-08 | 53 |
regional part of cerebral cortex | 1.00e-07 | 22 |
pre-chordal neural plate | 1.30e-07 | 61 |
telencephalon | 2.55e-07 | 34 |
cerebral cortex | 2.72e-07 | 25 |
pallium | 2.72e-07 | 25 |
tube | 3.24e-07 | 192 |
regional part of forebrain | 4.62e-07 | 41 |
forebrain | 4.62e-07 | 41 |
anterior neural tube | 4.62e-07 | 41 |
future forebrain | 4.62e-07 | 41 |
brain | 4.97e-07 | 68 |
future brain | 4.97e-07 | 68 |
neocortex | 5.11e-07 | 20 |