FFCP PHASE1:Hg19::chr12:127690461..127690477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:127690461..127690477,- | |||
|coexpression_cluster_id=C276 | |coexpression_cluster_id=C276 | ||
|description=CAGE_peak_at_chr12:127690461..127690477,- | |description=CAGE_peak_at_chr12:127690461..127690477,- | ||
|id=chr12:127690461..127690477,- | |id=chr12:127690461..127690477,- | ||
|ontology_enrichment_celltype=CL:1000507!1.54e-09!12;CL:1000494!1.54e-09!12;CL:1000497!1.50e-08!18;CL:0002518!1.50e-08!18 | |ontology_enrichment_celltype=CL:1000507!1.54e-09!12;CL:1000494!1.54e-09!12;CL:1000497!1.50e-08!18;CL:0002518!1.50e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;7.76e-25;10!CL:1000494;7.76e-25;10!CL:1000497;9.07e-21;17!CL:0002518;9.07e-21;17!CL:1000449;6.35e-16;15!CL:0002681;5.66e-09;12!CL:0002584;5.66e-09;12!CL:0000650;1.30e-07;2!CL:1000500;1.30e-07;2!CL:1000618;1.30e-07;2!CL:1001318;1.30e-07;2!CL:0002173;1.30e-07;2!CL:0000669;1.39e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,7.68e-25,10;CL:1000494,7.68e-25,10;CL:1000497,9.45e-21,17;CL:0002518,9.45e-21,17;CL:1000449,6.31e-16,15;CL:0002681,5.67e-09,12;CL:0002584,5.67e-09,12;CL:0000650,1.32e-07,2;CL:1000500,1.32e-07,2;CL:1000618,1.32e-07,2;CL:1001318,1.32e-07,2;CL:0002173,1.32e-07,2;CL:0000669,1.73e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.04e-11!14;DOID:120!4.20e-10!27;DOID:193!4.54e-09!29 | |ontology_enrichment_disease=DOID:2394!7.04e-11!14;DOID:120!4.20e-10!27;DOID:193!4.54e-09!29 | ||
|ontology_enrichment_disease_v019=DOID:120;4.67e-08;27!DOID:193;2.22e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:120,4.67e-08,27;DOID:193,2.22e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0009773!1.54e-09!12;UBERON:0001231!1.54e-09!12;UBERON:0004810!1.54e-09!12;UBERON:0002113!2.19e-07!27;UBERON:0003918!2.19e-07!27;UBERON:0005095!2.19e-07!27;UBERON:0007687!2.19e-07!27;UBERON:0000489!2.95e-07!32;UBERON:0003134!9.42e-07!37;UBERON:0000474!9.42e-07!37 | |ontology_enrichment_uberon=UBERON:0009773!1.54e-09!12;UBERON:0001231!1.54e-09!12;UBERON:0004810!1.54e-09!12;UBERON:0002113!2.19e-07!27;UBERON:0003918!2.19e-07!27;UBERON:0005095!2.19e-07!27;UBERON:0007687!2.19e-07!27;UBERON:0000489!2.95e-07!32;UBERON:0003134!9.42e-07!37;UBERON:0000474!9.42e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.76e-25;10!UBERON:0009773;7.76e-25;10!UBERON:0001231;7.76e-25;10!UBERON:0004810;7.76e-25;10!UBERON:0002113;1.48e-16;24!UBERON:0011143;1.48e-16;24!UBERON:0006555;6.35e-16;15!UBERON:0004819;6.35e-16;15!UBERON:0001285;6.35e-16;15!UBERON:0007684;6.35e-16;15!UBERON:0000489;3.31e-13;29!UBERON:0006554;1.13e-12;30!UBERON:0001008;1.13e-12;30!UBERON:0000353;3.84e-12;15!UBERON:0001013;2.19e-09;14!UBERON:0001225;5.66e-09;12!UBERON:0008987;5.66e-09;12!UBERON:0003567;1.30e-07;2!UBERON:0003838;1.30e-07;2!UBERON:0003586;1.30e-07;2!UBERON:0005169;1.30e-07;2!UBERON:0002321;1.30e-07;2!UBERON:0005215;1.30e-07;2!UBERON:0002303;1.30e-07;2!UBERON:0002319;1.30e-07;2!UBERON:0001851;5.01e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,7.68e-25,10;UBERON:0004211,6.31e-16,15;UBERON:0009773,6.31e-16,15;UBERON:0001231,6.31e-16,15;UBERON:0001285,6.31e-16,15;UBERON:0007684,6.31e-16,15;UBERON:0004208,6.31e-16,15;UBERON:0002113,4.89e-15,26;UBERON:0003918,4.89e-15,26;UBERON:0011143,4.89e-15,26;UBERON:0005095,4.89e-15,26;UBERON:0007687,4.89e-15,26;UBERON:0006555,8.19e-15,16;UBERON:0004819,8.19e-15,16;UBERON:0000489,3.74e-12,31;UBERON:0000353,3.94e-12,15;UBERON:0005172,2.14e-09,54;UBERON:0005173,2.14e-09,54;UBERON:0001013,2.36e-09,14;UBERON:0001225,5.67e-09,12;UBERON:0008987,5.67e-09,12;UBERON:0006554,2.01e-08,47;UBERON:0001008,3.46e-08,48;UBERON:0002417,4.13e-08,60;UBERON:0000916,4.13e-08,60;UBERON:0003567,1.32e-07,2;UBERON:0003838,1.32e-07,2;UBERON:0003586,1.32e-07,2;UBERON:0005169,1.32e-07,2;UBERON:0002321,1.32e-07,2;UBERON:0005215,1.32e-07,2;UBERON:0002303,1.32e-07,2;UBERON:0002319,1.32e-07,2;UBERON:0001851,5.02e-07,15;UBERON:0003104,6.34e-07,160;UBERON:0009142,6.34e-07,160;UBERON:0003103,7.27e-07,68 | |||
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|short_description=p@chr12:127690461..127690477,- | |short_description=p@chr12:127690461..127690477,- | ||
}} | }} |
Latest revision as of 06:36, 24 July 2015
Short description: | p@chr12:127690461..127690477, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:127690461..127690477, - |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 7.68e-25 | 10 |
nephron tubule epithelial cell | 7.68e-25 | 10 |
kidney cell | 9.45e-21 | 17 |
kidney epithelial cell | 9.45e-21 | 17 |
epithelial cell of nephron | 6.31e-16 | 15 |
kidney cortical cell | 5.67e-09 | 12 |
renal cortical epithelial cell | 5.67e-09 | 12 |
mesangial cell | 1.32e-07 | 2 |
kidney interstitial cell | 1.32e-07 | 2 |
juxtaglomerular complex cell | 1.32e-07 | 2 |
renal interstitial pericyte | 1.32e-07 | 2 |
extraglomerular mesangial cell | 1.32e-07 | 2 |
pericyte cell | 1.73e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 4.67e-08 | 27 |
reproductive organ cancer | 2.22e-07 | 29 |