FFCP PHASE1:Hg19::chr12:32555079..32555083,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:32555079..32555083,+ | |||
|coexpression_cluster_id=C3278 | |coexpression_cluster_id=C3278 | ||
|description=CAGE_peak_at_chr12:32555079..32555083,+ | |description=CAGE_peak_at_chr12:32555079..32555083,+ | ||
|id=chr12:32555079..32555083,+ | |id=chr12:32555079..32555083,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.75e-07!254 | |ontology_enrichment_celltype=CL:0000066!1.75e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.41e-18;7!CL:0000586;4.41e-18;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.96e-18,7;CL:0000586,4.96e-18,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.57e-22;10!UBERON:0005564;8.57e-22;10!UBERON:0005754;8.17e-15;1!UBERON:0007297;4.68e-08;2 | |||
|ontology_enrichment_disease=DOID:305!6.67e-09!106;DOID:0050687!6.26e-07!143 | |ontology_enrichment_disease=DOID:305!6.67e-09!106;DOID:0050687!6.26e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.97e-14;1!DOID:10165;1.97e-14;1!DOID:1798;1.97e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.15e-14,1;DOID:10165,3.15e-14,1;DOID:1798,3.15e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.76e-16!115;UBERON:0003135!7.34e-09!11;UBERON:0003101!1.10e-08!22;UBERON:0000079!1.10e-08!22;UBERON:0000473!4.22e-08!8 | |ontology_enrichment_uberon=UBERON:0007023!3.76e-16!115;UBERON:0003135!7.34e-09!11;UBERON:0003101!1.10e-08!22;UBERON:0000079!1.10e-08!22;UBERON:0000473!4.22e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.79e-42;8!UBERON:0003135;1.79e-30;11!UBERON:0000991;5.34e-16;21!UBERON:0003101;2.84e-15;22!UBERON:0000079;2.84e-15;22!UBERON:0000998;8.17e-15;1!UBERON:0006868;8.17e-15;1!UBERON:0000160;3.68e-12;17!UBERON:0000059;1.61e-11;11!UBERON:0004921;5.91e-10;33!UBERON:0005409;1.43e-09;22!UBERON:0002323;6.01e-08;45!UBERON:0002553;3.56e-07;52!UBERON:0001155;6.60e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.63e-42,8;UBERON:0003135,2.08e-30,11;UBERON:0000991,5.78e-16,21;UBERON:0009196,5.78e-16,21;UBERON:0009117,5.78e-16,21;UBERON:0005564,5.78e-16,21;UBERON:0004176,3.07e-15,22;UBERON:0003101,3.07e-15,22;UBERON:0000079,3.07e-15,22;UBERON:0000998,6.22e-15,1;UBERON:0006868,6.22e-15,1;UBERON:0000160,3.32e-12,17;UBERON:0000059,1.47e-11,11;UBERON:0002553,3.82e-10,61;UBERON:0002323,3.83e-10,46;UBERON:0004458,1.67e-09,49;UBERON:0003886,1.36e-08,54;UBERON:0005409,1.60e-08,25;UBERON:0003133,5.95e-07,48;UBERON:0001155,6.79e-07,9 | |||
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| ||
|short_description=p@chr12:32555079..32555083,+ | |short_description=p@chr12:32555079..32555083,+ | ||
}} | }} |
Latest revision as of 08:13, 24 July 2015
Short description: | p@chr12:32555079..32555083, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:32555079..32555083, + |
Coexpression cluster: | C3278_testicular_small_colon_amniotic_seminal_Endothelial_stomach |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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germ line cell | 4.96e-18 | 7 |
germ cell | 4.96e-18 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 9.63e-42 | 8 |
male reproductive organ | 2.08e-30 | 11 |
gonad | 5.78e-16 | 21 |
indifferent external genitalia | 5.78e-16 | 21 |
indifferent gonad | 5.78e-16 | 21 |
gonad primordium | 5.78e-16 | 21 |
external genitalia | 3.07e-15 | 22 |
male organism | 3.07e-15 | 22 |
male reproductive system | 3.07e-15 | 22 |
seminal vesicle | 6.22e-15 | 1 |
seminal fluid secreting gland | 6.22e-15 | 1 |
intestine | 3.32e-12 | 17 |
large intestine | 1.47e-11 | 11 |
anatomical cavity | 3.82e-10 | 61 |
body cavity | 3.83e-10 | 46 |
body cavity or lining | 1.67e-09 | 49 |
body cavity precursor | 1.36e-08 | 54 |
gastrointestinal system | 1.60e-08 | 25 |
reproductive organ | 5.95e-07 | 48 |
colon | 6.79e-07 | 9 |
Ontology term | p-value | n |
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islet cell tumor | 3.15e-14 | 1 |
endocrine pancreas cancer | 3.15e-14 | 1 |
pancreatic endocrine carcinoma | 3.15e-14 | 1 |