FFCP PHASE1:Hg19::chr13:46554103..46554144,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:46554103..46554144,- | |||
|coexpression_cluster_id=C1383 | |coexpression_cluster_id=C1383 | ||
|description=CAGE_peak_at_chr13:46554103..46554144,- | |description=CAGE_peak_at_chr13:46554103..46554144,- | ||
|id=chr13:46554103..46554144,- | |id=chr13:46554103..46554144,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.67e-15!239;DOID:162!2.71e-15!235;DOID:0050686!8.60e-08!137;DOID:2531!7.97e-07!51;DOID:0060083!7.97e-07!51;DOID:0050687!8.33e-07!143 | |ontology_enrichment_disease=DOID:14566!1.67e-15!239;DOID:162!2.71e-15!235;DOID:0050686!8.60e-08!137;DOID:2531!7.97e-07!51;DOID:0060083!7.97e-07!51;DOID:0050687!8.33e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,9.21e-14,239;DOID:162,2.04e-13,235;DOID:0050686,1.27e-07,137;DOID:2531,4.62e-07,51;DOID:0060083,4.62e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.84e-11!57;UBERON:0005068!3.84e-11!57;UBERON:0006241!3.84e-11!57;UBERON:0007135!3.84e-11!57;UBERON:0002780!1.69e-10!41;UBERON:0001890!1.69e-10!41;UBERON:0006240!1.69e-10!41;UBERON:0003080!1.07e-09!42;UBERON:0001017!1.71e-09!82;UBERON:0000073!2.89e-09!94;UBERON:0001016!2.89e-09!94;UBERON:0002020!2.94e-09!34;UBERON:0003528!2.94e-09!34;UBERON:0005743!4.57e-09!86;UBERON:0000955!1.77e-08!69;UBERON:0006238!1.77e-08!69;UBERON:0002791!2.63e-08!33;UBERON:0001893!3.38e-08!34;UBERON:0002616!7.55e-08!59;UBERON:0001869!1.13e-07!32 | |ontology_enrichment_uberon=UBERON:0001049!3.84e-11!57;UBERON:0005068!3.84e-11!57;UBERON:0006241!3.84e-11!57;UBERON:0007135!3.84e-11!57;UBERON:0002780!1.69e-10!41;UBERON:0001890!1.69e-10!41;UBERON:0006240!1.69e-10!41;UBERON:0003080!1.07e-09!42;UBERON:0001017!1.71e-09!82;UBERON:0000073!2.89e-09!94;UBERON:0001016!2.89e-09!94;UBERON:0002020!2.94e-09!34;UBERON:0003528!2.94e-09!34;UBERON:0005743!4.57e-09!86;UBERON:0000955!1.77e-08!69;UBERON:0006238!1.77e-08!69;UBERON:0002791!2.63e-08!33;UBERON:0001893!3.38e-08!34;UBERON:0002616!7.55e-08!59;UBERON:0001869!1.13e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;7.80e-08;34!UBERON:0002020;7.80e-08;34!UBERON:0002780;8.51e-08;41!UBERON:0001890;8.51e-08;41!UBERON:0002791;1.67e-07;32!UBERON:0000073;5.19e-07;53!UBERON:0002616;5.19e-07;53!UBERON:0001893;6.00e-07;34!UBERON:0001869;7.02e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.15e-12,56;UBERON:0005068,2.15e-12,56;UBERON:0006241,2.15e-12,56;UBERON:0007135,2.15e-12,56;UBERON:0000073,4.04e-11,53;UBERON:0002616,4.04e-11,53;UBERON:0002780,1.04e-10,41;UBERON:0001890,1.04e-10,41;UBERON:0003080,1.04e-10,41;UBERON:0006240,1.04e-10,41;UBERON:0001016,1.04e-10,89;UBERON:0001017,1.71e-10,81;UBERON:0000955,1.34e-09,68;UBERON:0006238,1.34e-09,68;UBERON:0003528,2.38e-09,34;UBERON:0002020,2.38e-09,34;UBERON:0002346,1.49e-08,86;UBERON:0002791,2.47e-08,32;UBERON:0001893,3.10e-08,34;UBERON:0001869,1.14e-07,32;UBERON:0003075,3.31e-07,82;UBERON:0007284,3.31e-07,82 | |||
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| ||
|short_description=p@chr13:46554103..46554144,- | |short_description=p@chr13:46554103..46554144,- | ||
}} | }} |
Latest revision as of 16:19, 24 July 2015
Short description: | p@chr13:46554103..46554144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:46554103..46554144, - |
Coexpression cluster: | C1383_neuroectodermal_neuroblastoma_Hepatocyte_testicular_amygdala_Monocytederived_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.15e-12 | 56 |
neural rod | 2.15e-12 | 56 |
future spinal cord | 2.15e-12 | 56 |
neural keel | 2.15e-12 | 56 |
regional part of nervous system | 4.04e-11 | 53 |
regional part of brain | 4.04e-11 | 53 |
regional part of forebrain | 1.04e-10 | 41 |
forebrain | 1.04e-10 | 41 |
anterior neural tube | 1.04e-10 | 41 |
future forebrain | 1.04e-10 | 41 |
nervous system | 1.04e-10 | 89 |
central nervous system | 1.71e-10 | 81 |
brain | 1.34e-09 | 68 |
future brain | 1.34e-09 | 68 |
brain grey matter | 2.38e-09 | 34 |
gray matter | 2.38e-09 | 34 |
neurectoderm | 1.49e-08 | 86 |
regional part of telencephalon | 2.47e-08 | 32 |
telencephalon | 3.10e-08 | 34 |
cerebral hemisphere | 1.14e-07 | 32 |
neural plate | 3.31e-07 | 82 |
presumptive neural plate | 3.31e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 9.21e-14 | 239 |
cancer | 2.04e-13 | 235 |
organ system cancer | 1.27e-07 | 137 |
hematologic cancer | 4.62e-07 | 51 |
immune system cancer | 4.62e-07 | 51 |