FFCP PHASE1:Hg19::chr16:15835648..15835720,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4629 | |EntrezGene=4629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7569 | |HGNC=7569 | ||
|TSSclassifier=strong | |||
|UniProt=P35749,Q7Z7R0 | |UniProt=P35749,Q7Z7R0 | ||
|association_with_transcript=-135bp_to_D10667_5end | |association_with_transcript=-135bp_to_D10667_5end | ||
|cluster_id=chr16:15835648..15835720,- | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_4_at_MYH11_5end | |description=CAGE_peak_4_at_MYH11_5end | ||
|id=chr16:15835648..15835720,- | |id=chr16:15835648..15835720,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.00e-11;65!UBERON:0007297;5.32e-10;2!UBERON:0006965;1.37e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.65e-70!115;UBERON:0006947!8.36e-09!3;UBERON:0004054!8.36e-09!3;UBERON:0000062!4.19e-08!511;UBERON:0000481!4.23e-08!347;UBERON:0003135!4.84e-08!11;UBERON:0003978!5.43e-08!3;UBERON:0009751!5.43e-08!3;UBERON:0000946!5.43e-08!3;UBERON:0002523!5.43e-08!3;UBERON:0005983!5.43e-08!3;UBERON:0002165!5.43e-08!3;UBERON:0002062!5.43e-08!3;UBERON:0007280!5.43e-08!3;UBERON:0000059!1.30e-07!11;UBERON:0004151!1.85e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!2.65e-70!115;UBERON:0006947!8.36e-09!3;UBERON:0004054!8.36e-09!3;UBERON:0000062!4.19e-08!511;UBERON:0000481!4.23e-08!347;UBERON:0003135!4.84e-08!11;UBERON:0003978!5.43e-08!3;UBERON:0009751!5.43e-08!3;UBERON:0000946!5.43e-08!3;UBERON:0002523!5.43e-08!3;UBERON:0005983!5.43e-08!3;UBERON:0002165!5.43e-08!3;UBERON:0002062!5.43e-08!3;UBERON:0007280!5.43e-08!3;UBERON:0000059!1.30e-07!11;UBERON:0004151!1.85e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.96e-16;33!UBERON:0006947;3.95e-14;3!UBERON:0004054;3.95e-14;3!UBERON:0000160;4.47e-14;17!UBERON:0003135;8.13e-14;11!UBERON:0005409;1.78e-13;22!UBERON:0005904;1.05e-10;4!UBERON:0007023;1.70e-10;114!UBERON:0000059;1.39e-09;11!UBERON:0003101;8.50e-09;22!UBERON:0000079;8.50e-09;22!UBERON:0003127;1.02e-08;2!UBERON:0001829;1.02e-08;2!UBERON:0002108;2.25e-08;4!UBERON:0001555;6.81e-08;54!UBERON:0001155;8.14e-08;9!UBERON:0001041;5.42e-07;14!UBERON:0004175;6.57e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.02e-42,114;UBERON:0006947,4.04e-14,3;UBERON:0004054,4.04e-14,3;UBERON:0000160,4.64e-14,17;UBERON:0003135,8.89e-14,11;UBERON:0005409,9.77e-12,25;UBERON:0005904,1.07e-10,4;UBERON:0004921,2.82e-10,118;UBERON:0000059,1.37e-09,11;UBERON:0003101,8.82e-09,22;UBERON:0000079,8.82e-09,22;UBERON:0003127,9.44e-09,2;UBERON:0001829,1.06e-08,2;UBERON:0001007,1.72e-08,145;UBERON:0001555,1.72e-08,145;UBERON:0007026,1.72e-08,145;UBERON:0002108,2.43e-08,4;UBERON:0001155,7.93e-08,9;UBERON:0004119,2.97e-07,160;UBERON:0000925,2.97e-07,160;UBERON:0006595,2.97e-07,160;UBERON:0003133,4.57e-07,48 | |||
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| ||
|short_description=p4@MYH11 | |short_description=p4@MYH11 | ||
}} | }} |
Latest revision as of 20:23, 24 September 2015
Short description: | p4@MYH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYH11_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -135bp_to_D10667_5end |
EntrezGene: | MYH11 |
HGNC: | 7569 |
UniProt: | P35749Q7Z7R0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.02e-42 | 114 |
male genital duct | 4.04e-14 | 3 |
internal male genitalia | 4.04e-14 | 3 |
intestine | 4.64e-14 | 17 |
male reproductive organ | 8.89e-14 | 11 |
gastrointestinal system | 9.77e-12 | 25 |
duct of male reproductive system | 1.07e-10 | 4 |
subdivision of digestive tract | 2.82e-10 | 118 |
large intestine | 1.37e-09 | 11 |
male organism | 8.82e-09 | 22 |
male reproductive system | 8.82e-09 | 22 |
open tracheal system trachea | 9.44e-09 | 2 |
major salivary gland | 1.06e-08 | 2 |
digestive system | 1.72e-08 | 145 |
digestive tract | 1.72e-08 | 145 |
primitive gut | 1.72e-08 | 145 |
small intestine | 2.43e-08 | 4 |
colon | 7.93e-08 | 9 |
endoderm-derived structure | 2.97e-07 | 160 |
endoderm | 2.97e-07 | 160 |
presumptive endoderm | 2.97e-07 | 160 |
reproductive organ | 4.57e-07 | 48 |