FFCP PHASE1:Hg19::chr18:46065483..46065540,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:46065483..46065540,+
|short_description=p2@CTIF
|description=CAGE_peak_2_at_CTIF_5end
|association_with_transcript=56bp_to_ENST00000382998,NM_001142397,NM...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9811 | |EntrezGene=9811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23925 | |HGNC=23925 | ||
|TSSclassifier=strong | |||
|UniProt=O43310 | |UniProt=O43310 | ||
|association_with_transcript=56bp_to_ENST00000382998,NM_001142397,NM_014772,uc002ldc.2,uc002ldd.2_5end | |||
|cluster_id=chr18:46065483..46065540,+ | |||
|coexpression_cluster_id=C3722 | |||
|description=CAGE_peak_2_at_CTIF_5end | |||
|id=chr18:46065483..46065540,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.50e-21!180;CL:0000057!5.16e-18!75;CL:0000222!1.09e-13!119;CL:0000220!7.41e-12!246;CL:0002321!1.87e-11!248;CL:0000183!8.27e-11!59;CL:0000187!2.60e-09!54;CL:0000192!3.13e-09!42;CL:0000514!3.13e-09!42;CL:0000680!3.44e-09!57;CL:0000056!3.44e-09!57;CL:0000355!3.44e-09!57;CL:0000393!4.22e-08!60;CL:0000211!4.22e-08!60;CL:0000359!2.13e-07!32;CL:0000136!3.71e-07!15;CL:0002620!7.00e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000057;4.86e-08;73!CL:0000349;1.67e-07;19!CL:0000359;4.70e-07;32!CL:0000192;5.92e-07;43!CL:0002620;6.32e-07;23!CL:0000136;8.62e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.23e-18,76;CL:0000222,6.01e-14,121;CL:0002321,1.22e-11,250;CL:0000187,2.47e-09,55;CL:0000192,3.17e-09,43;CL:0000514,3.17e-09,43;CL:0000680,3.23e-09,58;CL:0000056,3.23e-09,58;CL:0000355,3.23e-09,58;CL:0000393,3.91e-08,61;CL:0000211,3.91e-08,61;CL:0000349,1.54e-07,19;CL:0000359,1.94e-07,32;CL:0000136,3.38e-07,15;CL:0002620,6.41e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.92e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;1.58e-07;33!UBERON:0004571;1.58e-07;33!UBERON:0002619;2.32e-07;22!UBERON:0001950;3.18e-07;20!UBERON:0001869;3.49e-07;32!UBERON:0002384;6.05e-07;198!UBERON:0001637;6.39e-07;42!UBERON:0003509;6.39e-07;42!UBERON:0004572;6.39e-07;42!UBERON:0002791;7.74e-07;32!UBERON:0003528;8.76e-07;34!UBERON:0002020;8.76e-07;34!UBERON:0001893;9.74e-07;34 | |||
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| ||
|short_description=p2@CTIF | |||
}} | }} |
Latest revision as of 16:32, 19 September 2015
Short description: | p2@CTIF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CTIF_5end |
Coexpression cluster: | C3722_Preadipocyte_mature_Adipocyte_Fibroblast_Hepatic_Smooth_Pericytes |
Association with transcript: | 56bp_to_ENST00000382998, NM_001142397, NM_014772, uc002ldc.2, uc002ldd.2_5end |
EntrezGene: | CTIF |
HGNC: | 23925 |
UniProt: | O43310 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.23e-18 | 76 |
mesodermal cell | 6.01e-14 | 121 |
embryonic cell | 1.22e-11 | 250 |
muscle cell | 2.47e-09 | 55 |
smooth muscle cell | 3.17e-09 | 43 |
smooth muscle myoblast | 3.17e-09 | 43 |
muscle precursor cell | 3.23e-09 | 58 |
myoblast | 3.23e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.23e-09 | 58 |
electrically responsive cell | 3.91e-08 | 61 |
electrically active cell | 3.91e-08 | 61 |
extraembryonic cell | 1.54e-07 | 19 |
vascular associated smooth muscle cell | 1.94e-07 | 32 |
fat cell | 3.38e-07 | 15 |
skin fibroblast | 6.41e-07 | 23 |