FFCP PHASE1:Hg19::chr18:5197646..5197692,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:5197646..5197692,-
|short_description=p1@C18orf42
|description=CAGE_peak_1_at_C18orf42_5end
|association_with_transcript=-391bp_to_ENST00000434239,NM_0011...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=642597 | |EntrezGene=642597 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28285 | |HGNC=28285 | ||
|TSSclassifier=strong | |||
|UniProt=P0CW23 | |UniProt=P0CW23 | ||
|association_with_transcript=-391bp_to_ENST00000434239,NM_001145194,uc010wzc.1_5end | |||
|cluster_id=chr18:5197646..5197692,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_C18orf42_5end | |||
|id=chr18:5197646..5197692,- | |||
|ontology_enrichment_celltype=CL:0000242!4.12e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.63e-18;2!CL:0000242;1.63e-18;2!CL:0002553;2.84e-10;1!CL:0000312;5.99e-08;5!CL:0000240;9.28e-07;6!CL:0000311;9.28e-07;6!CL:0000079;9.28e-07;6!CL:0000237;9.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.20e-18,2;CL:0002553,3.10e-10,1;CL:0000312,5.31e-08,5;CL:0000240,8.39e-07,6;CL:0000311,8.39e-07,6;CL:0000079,8.39e-07,6;CL:0000237,8.39e-07,6;CL:0000036,8.39e-07,6;CL:0000357,8.39e-07,6;CL:0000114,8.39e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.80e-28;3!UBERON:0006222;7.88e-10;1!UBERON:0006601;1.32e-09;82!CL:0000357;9.28e-07;6!CL:0000114;9.28e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@C18orf42 | |||
}} | }} |
Latest revision as of 19:53, 19 September 2015
Short description: | p1@C18orf42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C18orf42_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -391bp_to_ENST00000434239, NM_001145194, uc010wzc.1_5end |
EntrezGene: | C18orf42 |
HGNC: | 28285 |
UniProt: | P0CW23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.20e-18 | 2 |
lung fibroblast | 3.10e-10 | 1 |
keratinocyte | 5.31e-08 | 5 |
stratified squamous epithelial cell | 8.39e-07 | 6 |
keratin accumulating cell | 8.39e-07 | 6 |
stratified epithelial cell | 8.39e-07 | 6 |
keratinizing barrier epithelial cell | 8.39e-07 | 6 |
epithelial fate stem cell | 8.39e-07 | 6 |
stratified epithelial stem cell | 8.39e-07 | 6 |
surface ectodermal cell | 8.39e-07 | 6 |