FFCP PHASE1:Hg19::chr18:55254141..55254152,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:55254141..55254152,-
|short_description=p8@FECH
|description=CAGE_peak_8_at_FECH_5end
|association_with_transcript=-137bp_to_ENST00000262093_5end
|Entrez...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2235 | |EntrezGene=2235 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3647 | |HGNC=3647 | ||
|TSSclassifier=strong | |||
|UniProt=P22830 | |UniProt=P22830 | ||
|association_with_transcript=-137bp_to_ENST00000262093_5end | |||
|cluster_id=chr18:55254141..55254152,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_8_at_FECH_5end | |||
|id=chr18:55254141..55254152,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.55e-16;2!CL:0000558;5.55e-16;2!CL:0002553;7.01e-09;1!CL:0000167;2.55e-08;1!CL:0000164;2.55e-08;1!CL:0000502;2.55e-08;1!CL:0000172;2.55e-08;1!CL:0000319;2.55e-08;1!CL:0000173;2.55e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.79e-16,2;CL:0000765,4.79e-16,2;CL:0000050,4.79e-16,2;CL:0000038,4.79e-16,2;CL:0000558,4.79e-16,2;CL:0000547,4.79e-16,2;CL:0000549,4.79e-16,2;CL:0000550,4.79e-16,2;CL:0000552,4.79e-16,2;CL:0002553,7.01e-09,1;CL:0000167,2.46e-08,1;CL:0000164,2.46e-08,1;CL:0000502,2.46e-08,1;CL:0000172,2.46e-08,1;CL:0000173,2.46e-08,1;CL:0002351,2.46e-08,1;CL:0000319,3.06e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002351;2.55e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.27e-08;1!DOID:1357;1.27e-08;1!DOID:3030;2.55e-08;1!DOID:4430;2.55e-08;1!DOID:0050615;1.67e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.18e-08,1;DOID:1357,1.18e-08,1;DOID:4430,2.46e-08,1;DOID:3030,3.06e-08,1;DOID:0050615,1.64e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.00e-07!15;UBERON:0000179!7.00e-07!15;UBERON:0000463!7.00e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.74e-38;15!UBERON:0000179;2.74e-38;15!UBERON:0000463;2.74e-38;15!UBERON:0002390;1.02e-19;32!UBERON:0002193;1.03e-12;42!UBERON:0001764;1.27e-08;1!UBERON:0001825;1.27e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.58e-38,15;UBERON:0000179,2.58e-38,15;UBERON:0000463,2.58e-38,15;UBERON:0002193,8.16e-09,108;UBERON:0001764,1.18e-08,1;UBERON:0001825,1.18e-08,1;UBERON:0002390,2.24e-08,98;UBERON:0003061,2.24e-08,98 | |||
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| ||
|short_description=p8@FECH | |||
}} | }} |
Latest revision as of 22:39, 19 September 2015
Short description: | p8@FECH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FECH_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -137bp_to_ENST00000262093_5end |
EntrezGene: | FECH |
HGNC: | 3647 |
UniProt: | P22830 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.79e-16 | 2 |
erythroblast | 4.79e-16 | 2 |
megakaryocyte-erythroid progenitor cell | 4.79e-16 | 2 |
erythroid progenitor cell | 4.79e-16 | 2 |
reticulocyte | 4.79e-16 | 2 |
proerythroblast | 4.79e-16 | 2 |
basophilic erythroblast | 4.79e-16 | 2 |
polychromatophilic erythroblast | 4.79e-16 | 2 |
orthochromatic erythroblast | 4.79e-16 | 2 |
lung fibroblast | 7.01e-09 | 1 |
peptide hormone secreting cell | 2.46e-08 | 1 |
enteroendocrine cell | 2.46e-08 | 1 |
type D enteroendocrine cell | 2.46e-08 | 1 |
somatostatin secreting cell | 2.46e-08 | 1 |
pancreatic D cell | 2.46e-08 | 1 |
progenitor cell of endocrine pancreas | 2.46e-08 | 1 |
mucus secreting cell | 3.06e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.58e-38 | 15 |
haemolymphatic fluid | 2.58e-38 | 15 |
organism substance | 2.58e-38 | 15 |
hemolymphoid system | 8.16e-09 | 108 |
maxillary sinus | 1.18e-08 | 1 |
paranasal sinus | 1.18e-08 | 1 |
hematopoietic system | 2.24e-08 | 98 |
blood island | 2.24e-08 | 98 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.18e-08 | 1 |
maxillary sinus cancer | 1.18e-08 | 1 |
somatostatinoma | 2.46e-08 | 1 |
mucinous adenocarcinoma | 3.06e-08 | 1 |
respiratory system cancer | 1.64e-07 | 16 |