FFCP PHASE1:Hg19::chr19:51223018..51223080,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50944 | |EntrezGene=50944 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15474 | |HGNC=15474 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010yce.1_5end | |association_with_transcript=0bp_to_uc010yce.1_5end | ||
|cluster_id=chr19:51223018..51223080,- | |||
|coexpression_cluster_id=C3516 | |coexpression_cluster_id=C3516 | ||
|description=CAGE_peak_1_at_SHANK1_5end | |description=CAGE_peak_1_at_SHANK1_5end | ||
|id=chr19:51223018..51223080,- | |id=chr19:51223018..51223080,- | ||
|ontology_enrichment_celltype=CL:0000055!5.35e-20!180;CL:0000057!2.42e-10!75;CL:0000183!2.31e-09!59;CL:0000680!2.63e-09!57;CL:0000056!2.63e-09!57;CL:0000355!2.63e-09!57;CL:0000187!3.58e-09!54;CL:0000393!4.79e-09!60;CL:0000211!4.79e-09!60;CL:0000192!6.14e-09!42;CL:0000514!6.14e-09!42;CL:0000359!9.87e-07!32 | |ontology_enrichment_celltype=CL:0000055!5.35e-20!180;CL:0000057!2.42e-10!75;CL:0000183!2.31e-09!59;CL:0000680!2.63e-09!57;CL:0000056!2.63e-09!57;CL:0000355!2.63e-09!57;CL:0000187!3.58e-09!54;CL:0000393!4.79e-09!60;CL:0000211!4.79e-09!60;CL:0000192!6.14e-09!42;CL:0000514!6.14e-09!42;CL:0000359!9.87e-07!32 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;2.33e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.52e-08,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;7.05e-21;22!UBERON:0001893;6.87e-20;34!UBERON:0001869;1.05e-19;32!UBERON:0003528;1.20e-19;34!UBERON:0002020;1.20e-19;34!UBERON:0002791;3.85e-19;32!UBERON:0001950;7.11e-19;20!UBERON:0002780;6.58e-18;41!UBERON:0001890;6.58e-18;41!UBERON:0000073;7.81e-18;53!UBERON:0002616;7.81e-18;53!UBERON:0000956;2.57e-17;25!UBERON:0000203;2.57e-17;25!UBERON:0000955;1.57e-12;68!UBERON:0001017;1.15e-11;75!UBERON:0001016;2.24e-10;83!UBERON:0002420;1.20e-07;9!UBERON:0007245;1.20e-07;9!UBERON:0010009;1.20e-07;9!UBERON:0010011;1.20e-07;9!UBERON:0000454;1.20e-07;9!UBERON:0004732;1.60e-07;13!UBERON:0000125;2.37e-07;9!UBERON:0002308;2.37e-07;9!UBERON:0004733;3.01e-07;12!UBERON:0002028;3.01e-07;12!UBERON:0000200;3.18e-07;6 | |||
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| ||
|short_description=p1@SHANK1 | |short_description=p1@SHANK1 | ||
}} | }} |
Latest revision as of 12:41, 19 September 2015
Short description: | p1@SHANK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHANK1_5end |
Coexpression cluster: | C3516_neuroectodermal_insula_temporal_amygdala_hippocampus_frontal_postcentral |
Association with transcript: | 0bp_to_uc010yce.1_5end |
EntrezGene: | SHANK1 |
HGNC: | 15474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.52e-08 | 14 |