FFCP PHASE1:Hg19::chr1:151804222..151804228,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6097 | |EntrezGene=6097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10260 | |HGNC=10260 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000392697_5end | |association_with_transcript=0bp_to_ENST00000392697_5end | ||
|cluster_id=chr1:151804222..151804228,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_5_at_RORC_5end | |description=CAGE_peak_5_at_RORC_5end | ||
|id=chr1:151804222..151804228,- | |id=chr1:151804222..151804228,- | ||
|ontology_enrichment_celltype=CL:0002150!2.98e-12!3;CL:0000861!2.98e-12!3;CL:0000181!8.51e-09!12;CL:0000417!8.51e-09!12;CL:0000668!8.51e-09!12;CL:0000414!8.51e-09!12;CL:0000412!8.51e-09!12;CL:0000182!8.51e-09!12 | |ontology_enrichment_celltype=CL:0002150!2.98e-12!3;CL:0000861!2.98e-12!3;CL:0000181!8.51e-09!12;CL:0000417!8.51e-09!12;CL:0000668!8.51e-09!12;CL:0000414!8.51e-09!12;CL:0000412!8.51e-09!12;CL:0000182!8.51e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.15e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.13e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.88e-21;1!UBERON:0007297;2.02e-11;2!UBERON:0003104;1.69e-10;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!5.56e-14!3;UBERON:0004054!5.56e-14!3;UBERON:0007023!1.10e-12!115;UBERON:0002530!3.91e-11!59;UBERON:0005904!1.34e-10!4;UBERON:0002365!1.02e-09!31;UBERON:0002330!1.02e-09!31;UBERON:0002368!2.56e-08!35;UBERON:0004921!2.92e-08!129;UBERON:0004185!2.92e-08!129;UBERON:0001007!7.10e-08!155;UBERON:0001555!7.10e-08!155;UBERON:0007026!7.10e-08!155;UBERON:0002107!1.35e-07!19;UBERON:0006925!1.35e-07!19;UBERON:0008836!1.35e-07!19;UBERON:0001041!2.18e-07!98;UBERON:0005172!3.20e-07!55;UBERON:0005173!3.20e-07!55;UBERON:0001044!4.10e-07!6;UBERON:0003293!4.10e-07!6;UBERON:0003294!4.10e-07!6;UBERON:0010047!4.10e-07!6;UBERON:0000167!4.10e-07!6;UBERON:0004119!7.73e-07!169;UBERON:0000925!7.73e-07!169;UBERON:0006595!7.73e-07!169 | |ontology_enrichment_uberon=UBERON:0006947!5.56e-14!3;UBERON:0004054!5.56e-14!3;UBERON:0007023!1.10e-12!115;UBERON:0002530!3.91e-11!59;UBERON:0005904!1.34e-10!4;UBERON:0002365!1.02e-09!31;UBERON:0002330!1.02e-09!31;UBERON:0002368!2.56e-08!35;UBERON:0004921!2.92e-08!129;UBERON:0004185!2.92e-08!129;UBERON:0001007!7.10e-08!155;UBERON:0001555!7.10e-08!155;UBERON:0007026!7.10e-08!155;UBERON:0002107!1.35e-07!19;UBERON:0006925!1.35e-07!19;UBERON:0008836!1.35e-07!19;UBERON:0001041!2.18e-07!98;UBERON:0005172!3.20e-07!55;UBERON:0005173!3.20e-07!55;UBERON:0001044!4.10e-07!6;UBERON:0003293!4.10e-07!6;UBERON:0003294!4.10e-07!6;UBERON:0010047!4.10e-07!6;UBERON:0000167!4.10e-07!6;UBERON:0004119!7.73e-07!169;UBERON:0000925!7.73e-07!169;UBERON:0006595!7.73e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;1.88e-21;1!UBERON:0006868;1.88e-21;1!UBERON:0001389;5.71e-21;1!UBERON:0000026;5.71e-21;1!UBERON:0008784;5.71e-21;1!UBERON:0006058;5.71e-21;1!UBERON:0003663;5.71e-21;1!UBERON:0004256;5.71e-21;1!UBERON:0004708;5.71e-21;1!UBERON:0002101;5.71e-21;1!UBERON:0004709;5.71e-21;1!UBERON:0002529;5.71e-21;1!UBERON:0010538;5.71e-21;1!UBERON:0003661;5.71e-21;1!UBERON:0010890;5.71e-21;1!UBERON:0002471;5.71e-21;1!UBERON:0001383;5.71e-21;1!UBERON:0010758;5.71e-21;1!UBERON:0010707;5.71e-21;1!UBERON:0000978;5.71e-21;1!UBERON:0002103;5.71e-21;1!UBERON:0001665;5.71e-21;1!UBERON:0003823;5.71e-21;1!UBERON:0000154;5.71e-21;1!UBERON:0010709;5.71e-21;1!UBERON:0001134;9.93e-12;16!UBERON:0002036;9.93e-12;16!UBERON:0000341;3.52e-11;2!UBERON:0005090;3.52e-11;2!UBERON:0001630;3.52e-11;2!UBERON:0006947;4.84e-08;3!UBERON:0004054;4.84e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,1.88e-21,1;UBERON:0006868,1.88e-21,1;UBERON:0005418,4.22e-21,1;UBERON:0001389,4.22e-21,1;UBERON:0000026,4.22e-21,1;UBERON:0008784,4.22e-21,1;UBERON:0006058,4.22e-21,1;UBERON:0003663,4.22e-21,1;UBERON:0004256,4.22e-21,1;UBERON:0004708,4.22e-21,1;UBERON:0002101,4.22e-21,1;UBERON:0004709,4.22e-21,1;UBERON:0002529,4.22e-21,1;UBERON:0010538,4.22e-21,1;UBERON:0003661,4.22e-21,1;UBERON:0010890,4.22e-21,1;UBERON:0002471,4.22e-21,1;UBERON:0001383,4.22e-21,1;UBERON:0004357,4.22e-21,1;UBERON:0004347,4.22e-21,1;UBERON:0005420,4.22e-21,1;UBERON:0005732,4.22e-21,1;UBERON:0010758,4.22e-21,1;UBERON:0010707,4.22e-21,1;UBERON:0000978,4.22e-21,1;UBERON:0002103,4.22e-21,1;UBERON:0001665,4.22e-21,1;UBERON:0003823,4.22e-21,1;UBERON:0000154,4.22e-21,1;UBERON:0010709,4.22e-21,1;UBERON:0005733,4.22e-21,1;UBERON:0005730,4.22e-21,1;UBERON:0005090,3.02e-11,2;UBERON:0001630,3.02e-11,2;UBERON:0000341,3.35e-11,2;UBERON:0006947,4.84e-08,3;UBERON:0004054,4.84e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,5.07020139287323,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.789168805698781,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0.13223260174269,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0.685952037749674,0,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,3.38709640152743,0,0,0,0.111855431797792,0,0,1.29485767437579,1.12929087541872,1.1598144313382,0,0,0,0,0,0,0,0.617393264863557,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0,0,0.190941474834495,0.404234377916439,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,5.07020139287323,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.789168805698781,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0.13223260174269,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0.685952037749674,0,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,3.38709640152743,0,0,0,0.111855431797792,0,0,1.29485767437579,1.12929087541872,1.1598144313382,0,0,0,0,0,0,0,0.617393264863557,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0,0,0.190941474834495,0.404234377916439,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p5@RORC | |short_description=p5@RORC | ||
}} | }} |
Latest revision as of 01:42, 17 September 2015
Short description: | p5@RORC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RORC_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000392697_5end |
EntrezGene: | RORC |
HGNC: | 10260 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.13e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 1.88e-21 | 1 |
seminal fluid secreting gland | 1.88e-21 | 1 |
hindlimb bud | 4.22e-21 | 1 |
soleus muscle | 4.22e-21 | 1 |
appendage | 4.22e-21 | 1 |
lower limb segment | 4.22e-21 | 1 |
multi-limb segment region | 4.22e-21 | 1 |
hindlimb muscle | 4.22e-21 | 1 |
hindlimb zeugopod muscle | 4.22e-21 | 1 |
paired limb/fin | 4.22e-21 | 1 |
limb | 4.22e-21 | 1 |
pelvic appendage | 4.22e-21 | 1 |
limb segment | 4.22e-21 | 1 |
paired limb/fin segment | 4.22e-21 | 1 |
limb muscle | 4.22e-21 | 1 |
pelvic complex muscle | 4.22e-21 | 1 |
zeugopod | 4.22e-21 | 1 |
muscle of leg | 4.22e-21 | 1 |
paired limb/fin bud | 4.22e-21 | 1 |
limb bud | 4.22e-21 | 1 |
pelvic appendage bud | 4.22e-21 | 1 |
limb/fin field | 4.22e-21 | 1 |
subdivision of organism along appendicular axis | 4.22e-21 | 1 |
appendage girdle complex | 4.22e-21 | 1 |
leg | 4.22e-21 | 1 |
hindlimb | 4.22e-21 | 1 |
triceps surae | 4.22e-21 | 1 |
hindlimb zeugopod | 4.22e-21 | 1 |
posterior region of body | 4.22e-21 | 1 |
pelvic complex | 4.22e-21 | 1 |
limb field | 4.22e-21 | 1 |
hindlimb/pelvic fin field | 4.22e-21 | 1 |
muscle structure | 3.02e-11 | 2 |
muscle organ | 3.02e-11 | 2 |
throat | 3.35e-11 | 2 |
male genital duct | 4.84e-08 | 3 |
internal male genitalia | 4.84e-08 | 3 |