FFCP PHASE1:Hg19::chr1:16348525..16348532,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1187 | |EntrezGene=1187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2026 | |HGNC=2026 | ||
|TSSclassifier=strong | |||
|UniProt=P51800 | |UniProt=P51800 | ||
|association_with_transcript=-14bp_to_ENST00000331433_5end | |association_with_transcript=-14bp_to_ENST00000331433_5end | ||
|cluster_id=chr1:16348525..16348532,+ | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_2_at_CLCNKA_5end | |description=CAGE_peak_2_at_CLCNKA_5end | ||
|id=chr1:16348525..16348532,+ | |id=chr1:16348525..16348532,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.99e-21;10!UBERON:0007687;6.99e-21;10!UBERON:0003104;1.10e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!7.83e-45!2;UBERON:0001736!2.62e-23!1;UBERON:0006298!2.62e-23!1;UBERON:0003296!5.14e-23!4;UBERON:0010133!5.14e-23!4;UBERON:0001044!1.31e-15!6;UBERON:0003293!1.31e-15!6;UBERON:0003294!1.31e-15!6;UBERON:0010047!1.31e-15!6;UBERON:0000167!1.31e-15!6;UBERON:0001894!1.31e-13!7;UBERON:0006222!1.31e-13!7;UBERON:0001829!2.32e-12!2;UBERON:0003408!9.24e-10!10 | |ontology_enrichment_uberon=UBERON:0000007!7.83e-45!2;UBERON:0001736!2.62e-23!1;UBERON:0006298!2.62e-23!1;UBERON:0003296!5.14e-23!4;UBERON:0010133!5.14e-23!4;UBERON:0001044!1.31e-15!6;UBERON:0003293!1.31e-15!6;UBERON:0003294!1.31e-15!6;UBERON:0010047!1.31e-15!6;UBERON:0000167!1.31e-15!6;UBERON:0001894!1.31e-13!7;UBERON:0006222!1.31e-13!7;UBERON:0001829!2.32e-12!2;UBERON:0003408!9.24e-10!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;8.10e-26;2!UBERON:0003296;1.21e-13;4!UBERON:0010133;1.21e-13;4!UBERON:0002113;2.35e-09;24!UBERON:0011143;2.35e-09;24!UBERON:0001894;2.26e-08;7!UBERON:0000489;6.44e-08;29!UBERON:0006554;1.10e-07;30!UBERON:0001008;1.10e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,7.14e-26,2;UBERON:0003296,1.13e-13,4;UBERON:0010133,1.13e-13,4;UBERON:0002113,1.03e-08,26;UBERON:0003918,1.03e-08,26;UBERON:0011143,1.03e-08,26;UBERON:0005095,1.03e-08,26;UBERON:0007687,1.03e-08,26;UBERON:0001894,2.18e-08,7;UBERON:0006222,2.18e-08,7;UBERON:0000489,1.80e-07,31 | |||
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|short_description=p2@CLCNKA | |short_description=p2@CLCNKA | ||
}} | }} |
Latest revision as of 08:42, 18 September 2015
Short description: | p2@CLCNKA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLCNKA_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -14bp_to_ENST00000331433_5end |
EntrezGene: | CLCNKA |
HGNC: | 2026 |
UniProt: | P51800 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 7.14e-26 | 2 |
gland of diencephalon | 1.13e-13 | 4 |
neuroendocrine gland | 1.13e-13 | 4 |
kidney | 1.03e-08 | 26 |
kidney mesenchyme | 1.03e-08 | 26 |
upper urinary tract | 1.03e-08 | 26 |
kidney rudiment | 1.03e-08 | 26 |
kidney field | 1.03e-08 | 26 |
diencephalon | 2.18e-08 | 7 |
future diencephalon | 2.18e-08 | 7 |
cavitated compound organ | 1.80e-07 | 31 |