FFCP PHASE1:Hg19::chr1:214214418..214214425,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:214214418..214214425,+ | |||
|coexpression_cluster_id=C931 | |coexpression_cluster_id=C931 | ||
|description=CAGE_peak_at_chr1:214214418..214214425,+ | |description=CAGE_peak_at_chr1:214214418..214214425,+ | ||
|id=chr1:214214418..214214425,+ | |id=chr1:214214418..214214425,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.52e-10!12;CL:0000417!1.52e-10!12;CL:0000668!1.52e-10!12;CL:0000414!1.52e-10!12;CL:0000412!1.52e-10!12;CL:0000182!1.52e-10!12 | |ontology_enrichment_celltype=CL:0000181!1.52e-10!12;CL:0000417!1.52e-10!12;CL:0000668!1.52e-10!12;CL:0000414!1.52e-10!12;CL:0000412!1.52e-10!12;CL:0000182!1.52e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000167;2.08e-16;1!CL:0000164;2.08e-16;1!CL:0000502;2.08e-16;1!CL:0000172;2.08e-16;1!CL:0000173;2.08e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.07e-16,1;CL:0000164,3.07e-16,1;CL:0000502,3.07e-16,1;CL:0000172,3.07e-16,1;CL:0000173,3.07e-16,1;CL:0002351,3.07e-16,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.12e-16;1!CL:0002351;2.08e-16;1 | |||
|ontology_enrichment_disease=DOID:171!8.16e-07!10 | |ontology_enrichment_disease=DOID:171!8.16e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:4430;2.08e-16;1!DOID:171;2.23e-14;10!DOID:3095;7.62e-07;22!DOID:2994;7.62e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.07e-16,1;DOID:171,2.33e-14,10;DOID:3095,7.78e-07,22;DOID:2994,7.78e-07,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002079;1.12e-16;1!UBERON:0002346;2.35e-16;4!UBERON:0000923;2.35e-16;4!UBERON:0010316;2.35e-16;4!UBERON:0005291;2.35e-16;4!UBERON:0002050;2.77e-13;5!UBERON:0005423;2.77e-13;5!UBERON:0001897;4.70e-09;2!UBERON:0010225;4.70e-09;2!UBERON:0001954;5.28e-09;2!UBERON:0002081;5.28e-09;2!UBERON:0003022;5.28e-09;2!UBERON:0002421;5.28e-09;2!UBERON:0002600;5.28e-09;2!UBERON:0000341;7.21e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.21e-16,1;UBERON:0001897,4.70e-09,2;UBERON:0010225,4.70e-09,2;UBERON:0001954,5.08e-09,2;UBERON:0003022,5.08e-09,2;UBERON:0002421,5.08e-09,2;UBERON:0002600,5.08e-09,2;UBERON:0002081,5.49e-09,2;UBERON:0010227,5.49e-09,2;UBERON:0000341,8.09e-09,2 | |||
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|short_description=p@chr1:214214418..214214425,+ | |short_description=p@chr1:214214418..214214425,+ | ||
}} | }} |
Latest revision as of 03:45, 28 July 2015
Short description: | p@chr1:214214418..214214425, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:214214418..214214425, + |
Coexpression cluster: | C931_neuroectodermal_peripheral_maxillary_gastrointestinal_Hepatocyte_small_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.07e-16 | 1 |
enteroendocrine cell | 3.07e-16 | 1 |
type D enteroendocrine cell | 3.07e-16 | 1 |
somatostatin secreting cell | 3.07e-16 | 1 |
pancreatic D cell | 3.07e-16 | 1 |
progenitor cell of endocrine pancreas | 3.07e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.21e-16 | 1 |
dorsal plus ventral thalamus | 4.70e-09 | 2 |
thalamic complex | 4.70e-09 | 2 |
Ammon's horn | 5.08e-09 | 2 |
lobe parts of cerebral cortex | 5.08e-09 | 2 |
hippocampal formation | 5.08e-09 | 2 |
limbic lobe | 5.08e-09 | 2 |
cardiac atrium | 5.49e-09 | 2 |
future cardiac atrium | 5.49e-09 | 2 |
throat | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.07e-16 | 1 |
neuroectodermal tumor | 2.33e-14 | 10 |
germ cell and embryonal cancer | 7.78e-07 | 22 |
germ cell cancer | 7.78e-07 | 22 |