FFCP PHASE1:Hg19::chr20:9147183..9147198,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5332 | |EntrezGene=5332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9059 | |HGNC=9059 | ||
|TSSclassifier=strong | |||
|UniProt=B1AJW1 | |UniProt=B1AJW1 | ||
|association_with_transcript=178bp_to_ENST00000416836_5end | |association_with_transcript=178bp_to_ENST00000416836_5end | ||
|cluster_id=chr20:9147183..9147198,+ | |||
|coexpression_cluster_id=C2626 | |coexpression_cluster_id=C2626 | ||
|description=CAGE_peak_13_at_PLCB4_5end | |description=CAGE_peak_13_at_PLCB4_5end | ||
|id=chr20:9147183..9147198,+ | |id=chr20:9147183..9147198,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;3.16e-18;1!UBERON:0006298;3.75e-18;1!UBERON:0007123;3.60e-14;5!UBERON:0007297;1.64e-09;2!UBERON:0003056;5.80e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;5.72e-18;1!DOID:9119;5.72e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,5.26e-18,1;DOID:3112,6.23e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0002046!5.55e-21!5;UBERON:0004117!5.55e-21!5;UBERON:0007689!5.55e-21!5;UBERON:0007123!5.55e-21!5;UBERON:0003091!5.55e-21!5;UBERON:0007023!1.69e-16!115;UBERON:0009722!5.19e-13!11;UBERON:0007690!5.19e-13!11;UBERON:0001829!3.51e-10!2;UBERON:0000341!1.66e-09!2;UBERON:0008814!2.25e-09!15;UBERON:0002360!7.40e-09!2;UBERON:0000094!7.40e-09!2;UBERON:0007645!7.40e-09!2;UBERON:0001044!2.21e-07!6;UBERON:0003293!2.21e-07!6;UBERON:0003294!2.21e-07!6;UBERON:0010047!2.21e-07!6;UBERON:0000167!2.21e-07!6;UBERON:0003408!4.10e-07!10 | |ontology_enrichment_uberon=UBERON:0002046!5.55e-21!5;UBERON:0004117!5.55e-21!5;UBERON:0007689!5.55e-21!5;UBERON:0007123!5.55e-21!5;UBERON:0003091!5.55e-21!5;UBERON:0007023!1.69e-16!115;UBERON:0009722!5.19e-13!11;UBERON:0007690!5.19e-13!11;UBERON:0001829!3.51e-10!2;UBERON:0000341!1.66e-09!2;UBERON:0008814!2.25e-09!15;UBERON:0002360!7.40e-09!2;UBERON:0000094!7.40e-09!2;UBERON:0007645!7.40e-09!2;UBERON:0001044!2.21e-07!6;UBERON:0003293!2.21e-07!6;UBERON:0003294!2.21e-07!6;UBERON:0010047!2.21e-07!6;UBERON:0000167!2.21e-07!6;UBERON:0003408!4.10e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.56e-34;2!UBERON:0001044;8.52e-26;6!UBERON:0003293;8.52e-26;6!UBERON:0003294;8.52e-26;6!UBERON:0010047;8.52e-26;6!UBERON:0003408;8.52e-26;6!UBERON:0000167;8.52e-26;6!UBERON:0001831;3.16e-18;1!UBERON:0001567;3.16e-18;1!UBERON:0001736;3.75e-18;1!UBERON:0001301;1.12e-17;1!UBERON:0002046;3.60e-14;5!UBERON:0001041;1.91e-11;14!UBERON:0004089;8.69e-10;2!UBERON:0000341;1.64e-09;2!UBERON:0000161;1.38e-08;19!UBERON:0000166;1.38e-08;19!UBERON:0006947;9.37e-07;3!UBERON:0004054;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.56e-34,2;UBERON:0001044,8.52e-26,6;UBERON:0003293,8.52e-26,6;UBERON:0003294,8.52e-26,6;UBERON:0010047,8.52e-26,6;UBERON:0000167,8.52e-26,6;UBERON:0001831,3.16e-18,1;UBERON:0001567,3.16e-18,1;UBERON:0008801,3.16e-18,1;UBERON:0001736,3.75e-18,1;UBERON:0006298,3.75e-18,1;UBERON:0001301,7.37e-18,1;UBERON:0003408,9.10e-16,10;UBERON:0002046,3.60e-14,5;UBERON:0004117,3.60e-14,5;UBERON:0007689,3.60e-14,5;UBERON:0007123,3.60e-14,5;UBERON:0003091,3.60e-14,5;UBERON:0004089,8.69e-10,2;UBERON:0000341,1.86e-09,2;UBERON:0000166,1.73e-07,22;UBERON:0002530,4.19e-07,59;UBERON:0009722,6.16e-07,11;UBERON:0007690,6.16e-07,11;UBERON:0006947,8.15e-07,3;UBERON:0004054,8.15e-07,3;UBERON:0000153,8.95e-07,62;UBERON:0007811,8.95e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59873811429845,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,3.99686361597384,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0,0,1.12990370390266,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0.573409195690071,0,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63814457288021,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27543835020193,0,0,0,0,0.0634158101939068,0,8.22386650285773,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5798717750915,0,0,0,0,0,0,0,4.30227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0.22589216407792,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,6.42220996766357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,1.1903221573187,0,0.0620747142958579,0.112131862580613,0.509177266225319,1.61693751166575,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59873811429845,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,3.99686361597384,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0,0,1.12990370390266,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0.573409195690071,0,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63814457288021,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27543835020193,0,0,0,0,0.0634158101939068,0,8.22386650285773,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5798717750915,0,0,0,0,0,0,0,4.30227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0.22589216407792,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,6.42220996766357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,1.1903221573187,0,0.0620747142958579,0.112131862580613,0.509177266225319,1.61693751166575,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p13@PLCB4 | |short_description=p13@PLCB4 | ||
}} | }} |
Latest revision as of 17:02, 17 September 2015
Short description: | p13@PLCB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PLCB4_5end |
Coexpression cluster: | C2626_retina_parotid_submaxillary_salivary_acute_papillary_neuroblastoma |
Association with transcript: | 178bp_to_ENST00000416836_5end |
EntrezGene: | PLCB4 |
HGNC: | 9059 |
UniProt: | B1AJW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.56e-34 | 2 |
saliva-secreting gland | 8.52e-26 | 6 |
gland of oral region | 8.52e-26 | 6 |
gland of foregut | 8.52e-26 | 6 |
oral gland | 8.52e-26 | 6 |
oral cavity | 8.52e-26 | 6 |
parotid gland | 3.16e-18 | 1 |
cheek | 3.16e-18 | 1 |
parotid gland primordium | 3.16e-18 | 1 |
submandibular gland | 3.75e-18 | 1 |
submandibular gland primordium | 3.75e-18 | 1 |
epididymis | 7.37e-18 | 1 |
gland of gut | 9.10e-16 | 10 |
thyroid gland | 3.60e-14 | 5 |
pharyngeal pouch | 3.60e-14 | 5 |
thyroid diverticulum | 3.60e-14 | 5 |
pharyngeal pouch 2 | 3.60e-14 | 5 |
thyroid primordium | 3.60e-14 | 5 |
midface | 8.69e-10 | 2 |
throat | 1.86e-09 | 2 |
oral opening | 1.73e-07 | 22 |
gland | 4.19e-07 | 59 |
entire pharyngeal arch endoderm | 6.16e-07 | 11 |
early pharyngeal endoderm | 6.16e-07 | 11 |
male genital duct | 8.15e-07 | 3 |
internal male genitalia | 8.15e-07 | 3 |
anterior region of body | 8.95e-07 | 62 |
craniocervical region | 8.95e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 5.26e-18 | 1 |
papillary adenocarcinoma | 6.23e-18 | 1 |