FFCP PHASE1:Hg19::chr21:27423414..27423442,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=351 | |EntrezGene=351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=620 | |HGNC=620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_ENST00000415997_5end | |association_with_transcript=-66bp_to_ENST00000415997_5end | ||
|cluster_id=chr21:27423414..27423442,- | |||
|coexpression_cluster_id=C1073 | |coexpression_cluster_id=C1073 | ||
|description=CAGE_peak_2_at_APP_5end | |description=CAGE_peak_2_at_APP_5end | ||
|id=chr21:27423414..27423442,- | |id=chr21:27423414..27423442,- | ||
|ontology_enrichment_celltype=CL:0000066!1.05e-08!254;CL:0000213!1.79e-07!57;CL:0000215!1.79e-07!57 | |ontology_enrichment_celltype=CL:0000066!1.05e-08!254;CL:0000213!1.79e-07!57;CL:0000215!1.79e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.93e-08,253;CL:0000213,1.53e-07,58;CL:0000215,1.53e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;3.38e-13;34!UBERON:0002020;3.38e-13;34!UBERON:0002791;3.44e-13;32!UBERON:0001869;6.41e-13;32!UBERON:0001893;1.24e-12;34!UBERON:0002780;2.67e-12;41!UBERON:0001890;2.67e-12;41!UBERON:0002619;5.15e-12;22!UBERON:0000956;4.01e-11;25!UBERON:0000203;4.01e-11;25!UBERON:0001950;6.75e-11;20!UBERON:0000073;3.15e-10;53!UBERON:0002616;3.15e-10;53!UBERON:0000955;4.01e-07;68!UBERON:0001017;5.53e-07;75 | |||
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| ||
|short_description=p2@APP | |short_description=p2@APP | ||
}} | }} |
Latest revision as of 23:01, 17 September 2015
Short description: | p2@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APP_5end |
Coexpression cluster: | C1073_olfactory_Prostate_Cardiac_medial_occipital_seminal_diencephalon |
Association with transcript: | -66bp_to_ENST00000415997_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.93e-08 | 253 |
lining cell | 1.53e-07 | 58 |
barrier cell | 1.53e-07 | 58 |