FFCP PHASE1:Hg19::chr22:45944499..45944509,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:45944499..45944509,+ | |||
|coexpression_cluster_id=C518 | |coexpression_cluster_id=C518 | ||
|description=CAGE_peak_at_chr22:45944499..45944509,+ | |description=CAGE_peak_at_chr22:45944499..45944509,+ | ||
|id=chr22:45944499..45944509,+ | |id=chr22:45944499..45944509,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.60e-10!180;CL:0000057!1.18e-09!75;CL:0000499!6.62e-07!27 | |ontology_enrichment_celltype=CL:0000055!1.60e-10!180;CL:0000057!1.18e-09!75;CL:0000499!6.62e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000135;7.70e-12;3!CL:0000388;7.70e-12;3!CL:0000499;8.33e-09;28!CL:0002561;1.48e-08;2!CL:0000669;2.72e-08;4!CL:0002575;4.52e-08;2!CL:0002363;1.01e-07;2!CL:0002598;2.22e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,7.63e-12,3;CL:0000388,7.63e-12,3;CL:0000499,6.83e-09,28;CL:0002561,1.52e-08,2;CL:0000669,4.77e-08,4;CL:0002575,5.59e-08,2;CL:0002363,1.03e-07,2;CL:0000008,1.03e-07,2;CL:0002598,3.52e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.01e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.93e-08!95;UBERON:0000481!3.52e-07!347 | |ontology_enrichment_uberon=UBERON:0003102!1.93e-08!95;UBERON:0000481!3.52e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;7.70e-12;3!UBERON:0000043;7.70e-12;3!UBERON:0007845;7.70e-12;3!UBERON:0004905;1.91e-10;8!UBERON:0000982;1.91e-10;8!UBERON:0004770;1.91e-10;8!UBERON:0005933;1.48e-08;2!UBERON:0005942;1.48e-08;2!UBERON:0005932;1.48e-08;2!UBERON:0003891;4.87e-08;4!UBERON:0003566;1.01e-07;2!UBERON:0001777;1.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,7.63e-12,3;UBERON:0000043,7.63e-12,3;UBERON:0007845,7.63e-12,3;UBERON:0004905,2.02e-10,8;UBERON:0000982,2.02e-10,8;UBERON:0004770,2.02e-10,8;UBERON:0005933,1.52e-08,2;UBERON:0005942,1.52e-08,2;UBERON:0005932,1.52e-08,2;UBERON:0003891,7.40e-08,4;UBERON:0003566,1.03e-07,2;UBERON:0001777,1.03e-07,2 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,1.0007329835313,0.446961094427288,0,0,1.26343974685366,4.17897005119742,0,0.697801167972428,0,0.263766978228454,1.11389717664042,0.331397375727916,0.672325146451775,1.20538905604795,0,0,0.123121058076788,0.612002073732759,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.724232594804119,0,0,0,0.221729397462564,0.43917392846563,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29469296599051,1.06400514659507,0,0,0,0,0,0.163461903113459,0.756787138224657,1.72852777344,0.234321431833797,0.624320153660641,0,2.09228152772521,0.352303495931295,0.161872944368132,0.140450806702248,0.816616685019573,0.368502951935304,0.723280468230358,5.94001428641027,1.48360157567134,0,0,0.336672227908132,0.375355559615893,0,0,0.612975591598039,0.300476117813194,0,0.179389635688862,0.213557388818567,0.635795703478686,0,0.412210116953756,0,0.558350568994769,0.168776332241266,0.0974370051611986,0,0.276149695926898,4.52608959092673,0,0.10075209822764,0.508681776931463,0,0,0,0.487894824518382,0.132529768321485,0.232387885739037,0.414644220061482,0.504641701751257,0.36497735907583,0,0.643240938192885,0,6.50115099244771,4.33127689001751,0.591534000199219,1.34867752062481,0.241011029883482,0.992645754591546,1.08939722046203,0.237270619111097,0.808987848960987,1.17732879075208,0,0,0,0,2.94017422771084,0,0,0,0,0.614942192715568,0.343135620597051,0,0,0,0.0925884451585296,1.3032332212413,2.07986957055916,0,0.695582429850461,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0.112131084345361,1.74384027533312,0.4400297149257,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0.285955987316295,1.08524321078289,0,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,0,1.62759014219841,1.87173775377726,3.03329280955175,0.946214490203608,1.28855556491985,0,2.27407504055985,1.03473071292505,0,0,0.695068915744663,2.15381273209015,2.05886054286514,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0.725156697549733,0,0.184161977871793,0.68888668898764,3.45973219212762,6.42509633301178,0,0,0,0,0.105551628892876,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0.515205058238611,0.0915694648183434,0.082509499920588,0,0,0,0.290012154876366,0.154048617114644,0,0.137836572484531,0.214840489736547,0.290033387828457,0,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,1.02359116524534,1.28381696410176,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.9554993798559,1.83827061539827,0,0,0,0,0,2.62357900818653,0,0.30982349809975,0,0,0.196498082026242,0,0.354761064070598,4.85547561184627,3.29294892959902,0.75894634753143,0.349934720244983,0,0,0,0.847294206991012,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0.211125408127993,1.39473591775749,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.493217028184668,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.846452843541768,0,0.46112780877612,1.16684937732704,0.434589487688032,0.957003479195758,0.457987967009312,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0,0.247127877893006,0,0.134802265961354,2.40773294189637,0,0,0,0,0.394584402849391,1.20990716048664,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.484945082442097,0,0.90392296312213,0,0,0.0633107959558787,0,0.160317640503067,1.28071796843612,0,0,0,0,0,0,0.235694034616795,0.271808412147228,0,0,0.577901179803038,0,0,0,0,0,1.11712960508902,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0.157566364614447,0.247247575143499,0.0674035438541849,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0.670869375198532,0,0,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,1.19730191562487,0,0.340776043570843,0,0,0,0,0,0,0,0.640724475406168,0.314408610199332,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.0620964029413835,0.276697269872462,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0.907385542579434,0.466311601748341,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0.673498977531838,0,0,0.214441591374926,0,0.453411851024545,0,0,0,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841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|short_description=p@chr22:45944499..45944509,+ | |short_description=p@chr22:45944499..45944509,+ | ||
}} | }} |
Latest revision as of 22:05, 28 July 2015
Short description: | p@chr22:45944499..45944509, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:45944499..45944509, + |
Coexpression cluster: | C518_sacrococcigeal_Prostate_Mesenchymal_Fibroblast_tridermal_Hair_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 7.63e-12 | 3 |
tendon cell | 7.63e-12 | 3 |
stromal cell | 6.83e-09 | 28 |
outer root sheath cell | 1.52e-08 | 2 |
pericyte cell | 4.77e-08 | 4 |
central nervous system pericyte | 5.59e-08 | 2 |
keratocyte | 1.03e-07 | 2 |
migratory cranial neural crest cell | 1.03e-07 | 2 |
bronchial smooth muscle cell | 3.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 7.63e-12 | 3 |
tendon | 7.63e-12 | 3 |
regular connective tissue | 7.63e-12 | 3 |
articulation | 2.02e-10 | 8 |
skeletal joint | 2.02e-10 | 8 |
articular system | 2.02e-10 | 8 |
hair root sheath | 1.52e-08 | 2 |
hair outer root sheath | 1.52e-08 | 2 |
bulb of hair follicle | 1.52e-08 | 2 |
stroma | 7.40e-08 | 4 |
head connective tissue | 1.03e-07 | 2 |
substantia propria of cornea | 1.03e-07 | 2 |