FFCP PHASE1:Hg19::chr2:198669365..198669376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5334 | |EntrezGene=5334 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9063 | |HGNC=9063 | ||
|TSSclassifier=strong | |||
|UniProt=Q15111,F8WAR2 | |UniProt=Q15111,F8WAR2 | ||
|association_with_transcript=-49bp_to_ENST00000428675,ENST00000435320,NM_006226,uc002uuv.3,uc010fsp.2_5end | |association_with_transcript=-49bp_to_ENST00000428675,ENST00000435320,NM_006226,uc002uuv.3,uc010fsp.2_5end | ||
|cluster_id=chr2:198669365..198669376,+ | |||
|coexpression_cluster_id=C4168 | |coexpression_cluster_id=C4168 | ||
|description=CAGE_peak_3_at_PLCL1_5end | |description=CAGE_peak_3_at_PLCL1_5end | ||
|id=chr2:198669365..198669376,+ | |id=chr2:198669365..198669376,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.93e-10!18;CL:0000789!4.93e-10!18;CL:0002420!4.93e-10!18;CL:0002419!4.93e-10!18;CL:0000790!4.93e-10!18;CL:0000738!1.86e-09!140;CL:0000084!5.70e-08!25;CL:0000827!5.70e-08!25;CL:0000037!2.16e-07!172;CL:0000566!2.16e-07!172;CL:0000625!9.36e-07!11;CL:0002032!9.86e-07!165;CL:0000837!9.86e-07!165 | |ontology_enrichment_celltype=CL:0000791!4.93e-10!18;CL:0000789!4.93e-10!18;CL:0002420!4.93e-10!18;CL:0002419!4.93e-10!18;CL:0000790!4.93e-10!18;CL:0000738!1.86e-09!140;CL:0000084!5.70e-08!25;CL:0000827!5.70e-08!25;CL:0000037!2.16e-07!172;CL:0000566!2.16e-07!172;CL:0000625!9.36e-07!11;CL:0002032!9.86e-07!165;CL:0000837!9.86e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.64e-14;18!CL:0000789;3.64e-14;18!CL:0002419;3.64e-14;18!CL:0000084;8.78e-12;25!CL:0000624;7.07e-09;6!CL:0000625;2.10e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.08e-14,18;CL:0000789,3.08e-14,18;CL:0002420,3.08e-14,18;CL:0002419,3.08e-14,18;CL:0000790,3.08e-14,18;CL:0000084,8.66e-12,25;CL:0000827,8.66e-12,25;CL:0000624,7.68e-09,6;CL:0000625,1.69e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.64e-14;18!UBERON:0006601;1.16e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.68e-41!115;UBERON:0001049!7.31e-29!57;UBERON:0005068!7.31e-29!57;UBERON:0006241!7.31e-29!57;UBERON:0007135!7.31e-29!57;UBERON:0002616!2.18e-24!59;UBERON:0003080!2.61e-23!42;UBERON:0002780!1.20e-22!41;UBERON:0001890!1.20e-22!41;UBERON:0006240!1.20e-22!41;UBERON:0002020!1.35e-21!34;UBERON:0003528!1.35e-21!34;UBERON:0001893!2.18e-21!34;UBERON:0002791!1.09e-20!33;UBERON:0001017!1.38e-20!82;UBERON:0001869!2.19e-20!32;UBERON:0000955!2.63e-20!69;UBERON:0006238!2.63e-20!69;UBERON:0005743!2.57e-19!86;UBERON:0000073!2.92e-17!94;UBERON:0001016!2.92e-17!94;UBERON:0003075!4.79e-17!86;UBERON:0007284!4.79e-17!86;UBERON:0002619!1.24e-16!22;UBERON:0000956!3.66e-16!25;UBERON:0000203!3.66e-16!25;UBERON:0001950!1.58e-15!20;UBERON:0002346!3.43e-15!90;UBERON:0003056!1.90e-13!61;UBERON:0000153!7.08e-10!129;UBERON:0007811!7.08e-10!129;UBERON:0000033!1.57e-08!123;UBERON:0000025!1.81e-07!194;UBERON:0002308!6.86e-07!9;UBERON:0000125!6.86e-07!9;UBERON:0002420!7.71e-07!9;UBERON:0007245!7.71e-07!9;UBERON:0010009!7.71e-07!9;UBERON:0010011!7.71e-07!9;UBERON:0000454!7.71e-07!9;UBERON:0003076!7.81e-07!15;UBERON:0003057!7.81e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!3.68e-41!115;UBERON:0001049!7.31e-29!57;UBERON:0005068!7.31e-29!57;UBERON:0006241!7.31e-29!57;UBERON:0007135!7.31e-29!57;UBERON:0002616!2.18e-24!59;UBERON:0003080!2.61e-23!42;UBERON:0002780!1.20e-22!41;UBERON:0001890!1.20e-22!41;UBERON:0006240!1.20e-22!41;UBERON:0002020!1.35e-21!34;UBERON:0003528!1.35e-21!34;UBERON:0001893!2.18e-21!34;UBERON:0002791!1.09e-20!33;UBERON:0001017!1.38e-20!82;UBERON:0001869!2.19e-20!32;UBERON:0000955!2.63e-20!69;UBERON:0006238!2.63e-20!69;UBERON:0005743!2.57e-19!86;UBERON:0000073!2.92e-17!94;UBERON:0001016!2.92e-17!94;UBERON:0003075!4.79e-17!86;UBERON:0007284!4.79e-17!86;UBERON:0002619!1.24e-16!22;UBERON:0000956!3.66e-16!25;UBERON:0000203!3.66e-16!25;UBERON:0001950!1.58e-15!20;UBERON:0002346!3.43e-15!90;UBERON:0003056!1.90e-13!61;UBERON:0000153!7.08e-10!129;UBERON:0007811!7.08e-10!129;UBERON:0000033!1.57e-08!123;UBERON:0000025!1.81e-07!194;UBERON:0002308!6.86e-07!9;UBERON:0000125!6.86e-07!9;UBERON:0002420!7.71e-07!9;UBERON:0007245!7.71e-07!9;UBERON:0010009!7.71e-07!9;UBERON:0010011!7.71e-07!9;UBERON:0000454!7.71e-07!9;UBERON:0003076!7.81e-07!15;UBERON:0003057!7.81e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.74e-26;34!UBERON:0002020;3.74e-26;34!UBERON:0002619;4.08e-26;22!UBERON:0001869;5.93e-26;32!UBERON:0001893;9.89e-26;34!UBERON:0002791;1.19e-25;32!UBERON:0001950;2.99e-24;20!UBERON:0002780;5.89e-24;41!UBERON:0001890;5.89e-24;41!UBERON:0000956;3.94e-22;25!UBERON:0000203;3.94e-22;25!UBERON:0000073;3.77e-21;53!UBERON:0002616;3.77e-21;53!UBERON:0000955;3.31e-14;68!UBERON:0001017;3.99e-13;75!UBERON:0007023;3.06e-11;114!UBERON:0001016;4.09e-11;83!UBERON:0000125;3.58e-10;9!UBERON:0002308;3.58e-10;9!UBERON:0002420;3.98e-10;9!UBERON:0007245;3.98e-10;9!UBERON:0010009;3.98e-10;9!UBERON:0010011;3.98e-10;9!UBERON:0000454;3.98e-10;9!UBERON:0001871;1.65e-08;6!UBERON:0000200;2.88e-08;6!UBERON:0004732;5.92e-08;13!UBERON:0009663;7.11e-08;7!UBERON:0002021;1.10e-07;5!UBERON:0002298;2.57e-07;6!UBERON:0001872;5.63e-07;5!UBERON:0004733;8.02e-07;12!UBERON:0002028;8.02e-07;12 | |||
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| ||
|short_description=p3@PLCL1 | |short_description=p3@PLCL1 | ||
}} | }} |
Latest revision as of 08:40, 19 September 2015
Short description: | p3@PLCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLCL1_5end |
Coexpression cluster: | C4168_optic_substantia_spinal_left_pineal_globus_thalamus |
Association with transcript: | -49bp_to_ENST00000428675, ENST00000435320, NM_006226, uc002uuv.3, uc010fsp.2_5end |
EntrezGene: | PLCL1 |
HGNC: | 9063 |
UniProt: | Q15111F8WAR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.08e-14 | 18 |
alpha-beta T cell | 3.08e-14 | 18 |
immature T cell | 3.08e-14 | 18 |
mature T cell | 3.08e-14 | 18 |
immature alpha-beta T cell | 3.08e-14 | 18 |
T cell | 8.66e-12 | 25 |
pro-T cell | 8.66e-12 | 25 |
CD4-positive, alpha-beta T cell | 7.68e-09 | 6 |
CD8-positive, alpha-beta T cell | 1.69e-08 | 11 |