FFCP PHASE1:Hg19::chr19:18901737..18901749,-: Difference between revisions
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|id=chr19:18901737..18901749,-
|short_description=p7@COMP
|description=CAGE_peak_7_at_COMP_5end
|association_with_transcript=-63bp_to_ENST00000547160_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1311 | |EntrezGene=1311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2227 | |HGNC=2227 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-63bp_to_ENST00000547160_5end | |||
|cluster_id=chr19:18901737..18901749,- | |||
|coexpression_cluster_id=C240 | |||
|description=CAGE_peak_7_at_COMP_5end | |||
|id=chr19:18901737..18901749,- | |||
|ontology_enrichment_celltype=CL:0002580!2.86e-24!3;CL:0000135!1.47e-23!3;CL:0000386!1.47e-23!3;CL:0000388!1.47e-23!3;CL:0002617!3.30e-17!2;CL:0002334!3.93e-16!12;CL:0000153!3.34e-14!9;CL:0000447!3.34e-14!9;CL:0000499!2.56e-13!27;CL:0000136!3.40e-13!15;CL:0000667!1.91e-12!6;CL:0000058!1.91e-12!6;CL:0000138!1.91e-12!6;CL:0002615!1.21e-11!3;CL:0002579!3.25e-11!3;CL:0000327!3.47e-09!14;CL:0002616!3.58e-09!1;CL:0000057!1.27e-08!75;CL:0000630!3.21e-08!9;CL:0000055!9.19e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002617;4.47e-45;2!CL:0002615;3.10e-30;3!CL:0002580;3.10e-30;3!CL:0000136;1.55e-27;13!CL:0000138;1.26e-15;6!CL:0000153;9.46e-11;9!CL:0000447;9.46e-11;9!CL:0002334;2.55e-08;12!CL:0000327;8.21e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,3.19e-45,2;CL:0002615,3.59e-30,3;CL:0002580,3.59e-30,3;CL:0000136,5.93e-24,15;CL:0000058,1.22e-15,6;CL:0000138,1.22e-15,6;CL:0000153,9.23e-11,9;CL:0000447,9.23e-11,9;CL:0002334,2.65e-08,12;CL:0000327,8.09e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!1.47e-23!3;UBERON:0003688!4.00e-21!6;UBERON:0002358!4.00e-21!6;UBERON:0003684!4.00e-21!6;UBERON:0001178!4.00e-21!6;UBERON:0000310!8.47e-20!10;UBERON:0001443!5.48e-18!11;UBERON:0004457!3.69e-16!12;UBERON:0000042!3.69e-16!12;UBERON:0000989!5.31e-09!1;UBERON:0008811!5.31e-09!1;UBERON:0006258!5.31e-09!1;UBERON:0005876!5.31e-09!1;UBERON:0004874!5.31e-09!1;UBERON:0004913!9.91e-09!1;UBERON:0003703!9.91e-09!1;UBERON:0001174!9.91e-09!1;UBERON:0004914!9.91e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.31e-35;10!UBERON:0001443;1.97e-32;11!UBERON:0003688;1.13e-15;6!UBERON:0002358;1.13e-15;6!UBERON:0003684;1.13e-15;6!UBERON:0001178;1.13e-15;6!UBERON:0004457;8.79e-11;9!UBERON:0000042;8.79e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.25e-35,10;UBERON:0001443,1.90e-32,11;UBERON:0003688,1.22e-15,6;UBERON:0002358,1.22e-15,6;UBERON:0003684,1.22e-15,6;UBERON:0001178,1.22e-15,6;UBERON:0004457,2.65e-08,12;UBERON:0000042,2.65e-08,12;UBERON:0000915,3.39e-07,52;UBERON:0009569,4.42e-07,112 | |||
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|short_description=p7@COMP | |||
}} | }} |
Latest revision as of 18:35, 16 September 2015
Short description: | p7@COMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_COMP_5end |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | -63bp_to_ENST00000547160_5end |
EntrezGene: | COMP |
HGNC: | 2227 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 3.19e-45 | 2 |
adipocyte of omentum tissue | 3.59e-30 | 3 |
preadipocyte of the breast | 3.59e-30 | 3 |
fat cell | 5.93e-24 | 15 |
chondroblast | 1.22e-15 | 6 |
chondrocyte | 1.22e-15 | 6 |
GAG secreting cell | 9.23e-11 | 9 |
carbohydrate secreting cell | 9.23e-11 | 9 |
preadipocyte | 2.65e-08 | 12 |
extracellular matrix secreting cell | 8.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
breast | 1.25e-35 | 10 |
chest | 1.90e-32 | 11 |
omentum | 1.22e-15 | 6 |
peritoneum | 1.22e-15 | 6 |
abdominal cavity | 1.22e-15 | 6 |
visceral peritoneum | 1.22e-15 | 6 |
cavity lining | 2.65e-08 | 12 |
serous membrane | 2.65e-08 | 12 |
thoracic segment of trunk | 3.39e-07 | 52 |
subdivision of trunk | 4.42e-07 | 112 |