FFCP PHASE1:Hg19::chr2:68280395..68280440,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10438 | |EntrezGene=10438 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=29911 | |HGNC=29911 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-126bp_to_uc002sea.3_5end | |association_with_transcript=-126bp_to_uc002sea.3_5end | ||
|cluster_id=chr2:68280395..68280440,- | |||
|coexpression_cluster_id=C191 | |coexpression_cluster_id=C191 | ||
|description=CAGE_peak_4_at_C1D_5end | |description=CAGE_peak_4_at_C1D_5end | ||
|id=chr2:68280395..68280440,- | |id=chr2:68280395..68280440,- | ||
|ontology_enrichment_celltype=CL:0002195!2.72e-10!2;CL:0002571!2.72e-10!2 | |ontology_enrichment_celltype=CL:0002195!2.72e-10!2;CL:0002571!2.72e-10!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.81e-21;10!UBERON:0007687;3.81e-21;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000989!1.08e-19!1;UBERON:0008811!1.08e-19!1;UBERON:0006258!1.08e-19!1;UBERON:0005876!1.08e-19!1;UBERON:0004874!1.08e-19!1;UBERON:0000998!1.30e-19!1;UBERON:0006868!1.30e-19!1;UBERON:0003135!1.85e-15!11;UBERON:0003133!2.02e-13!48;UBERON:0000002!4.52e-13!6;UBERON:0001560!4.52e-13!6;UBERON:0004175!6.21e-12!25;UBERON:0005156!6.78e-11!59;UBERON:0000990!6.78e-11!59;UBERON:0000473!5.80e-10!8;UBERON:0000995!2.33e-08!21;UBERON:0003101!4.89e-08!22;UBERON:0000079!4.89e-08!22;UBERON:0005795!5.26e-08!22;UBERON:0003975!5.26e-08!22;UBERON:0006947!2.05e-07!3;UBERON:0004054!2.05e-07!3 | |ontology_enrichment_uberon=UBERON:0000989!1.08e-19!1;UBERON:0008811!1.08e-19!1;UBERON:0006258!1.08e-19!1;UBERON:0005876!1.08e-19!1;UBERON:0004874!1.08e-19!1;UBERON:0000998!1.30e-19!1;UBERON:0006868!1.30e-19!1;UBERON:0003135!1.85e-15!11;UBERON:0003133!2.02e-13!48;UBERON:0000002!4.52e-13!6;UBERON:0001560!4.52e-13!6;UBERON:0004175!6.21e-12!25;UBERON:0005156!6.78e-11!59;UBERON:0000990!6.78e-11!59;UBERON:0000473!5.80e-10!8;UBERON:0000995!2.33e-08!21;UBERON:0003101!4.89e-08!22;UBERON:0000079!4.89e-08!22;UBERON:0005795!5.26e-08!22;UBERON:0003975!5.26e-08!22;UBERON:0006947!2.05e-07!3;UBERON:0004054!2.05e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.01e-09;24!UBERON:0011143;1.01e-09;24!UBERON:0000489;2.67e-08;29!UBERON:0006554;4.53e-08;30!UBERON:0001008;4.53e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.34e-09,26;UBERON:0003918,4.34e-09,26;UBERON:0011143,4.34e-09,26;UBERON:0005095,4.34e-09,26;UBERON:0007687,4.34e-09,26;UBERON:0000489,7.41e-08,31 | |||
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|short_description=p4@C1D | |short_description=p4@C1D | ||
}} | }} |
Latest revision as of 01:53, 18 September 2015
Short description: | p4@C1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C1D_5end |
Coexpression cluster: | C191_leiomyoblastoma_Mast_parietal_acute_bone_neuroepithelioma_embryonic |
Association with transcript: | -126bp_to_uc002sea.3_5end |
EntrezGene: | C1D |
HGNC: | 29911 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 4.34e-09 | 26 |
kidney mesenchyme | 4.34e-09 | 26 |
upper urinary tract | 4.34e-09 | 26 |
kidney rudiment | 4.34e-09 | 26 |
kidney field | 4.34e-09 | 26 |
cavitated compound organ | 7.41e-08 | 31 |