FFCP PHASE1:Hg19::chr3:185300242..185300263,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59343 | |EntrezGene=59343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23116 | |HGNC=23116 | ||
|TSSclassifier=strong | |||
|UniProt=C9IYB7 | |UniProt=C9IYB7 | ||
|association_with_transcript=-20bp_to_ENST00000430355_5end | |association_with_transcript=-20bp_to_ENST00000430355_5end | ||
|cluster_id=chr3:185300242..185300263,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_8_at_SENP2_5end | |description=CAGE_peak_8_at_SENP2_5end | ||
|id=chr3:185300242..185300263,+ | |id=chr3:185300242..185300263,+ | ||
|ontology_enrichment_celltype=CL:0002322!5.74e-56!5;CL:0000039!7.66e-26!7;CL:0000586!7.66e-26!7;CL:0000540!3.31e-17!6;CL:0000031!3.31e-17!6;CL:0000404!3.31e-17!6;CL:0000047!4.65e-13!8;CL:0000148!1.05e-10!10;CL:0000541!1.05e-10!10;CL:0000147!8.62e-08!14 | |ontology_enrichment_celltype=CL:0002322!5.74e-56!5;CL:0000039!7.66e-26!7;CL:0000586!7.66e-26!7;CL:0000540!3.31e-17!6;CL:0000031!3.31e-17!6;CL:0000404!3.31e-17!6;CL:0000047!4.65e-13!8;CL:0000148!1.05e-10!10;CL:0000541!1.05e-10!10;CL:0000147!8.62e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.85e-66;5!CL:0000039;1.13e-30;7!CL:0000586;1.13e-30;7!CL:0002321;2.85e-22;15!CL:0000540;2.42e-20;6!CL:0000404;2.42e-20;6!CL:0000148;1.33e-12;10!CL:0000147;3.64e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.62e-66,5;CL:0000039,1.13e-30,7;CL:0000586,1.13e-30,7;CL:0000540,2.42e-20,6;CL:0000031,2.42e-20,6;CL:0000404,2.42e-20,6;CL:0000047,2.00e-15,8;CL:0000148,1.22e-12,10;CL:0000541,1.22e-12,10;CL:0000147,3.44e-09,14;CL:0000133,1.60e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.73e-33;10!UBERON:0005564;5.73e-33;10!CL:0000031;2.42e-20;6 | |||
|ontology_enrichment_disease=DOID:3095!8.41e-18!22;DOID:2994!8.41e-18!22 | |ontology_enrichment_disease=DOID:3095!8.41e-18!22;DOID:2994!8.41e-18!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.61e-21;22!DOID:2994;2.61e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.70e-21,22;DOID:2994,2.70e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.17e-22!8;UBERON:0003135!1.45e-16!11;UBERON:0000991!3.42e-13!21;UBERON:0009196!3.42e-13!21;UBERON:0009117!3.42e-13!21;UBERON:0005564!3.42e-13!21;UBERON:0004176!1.37e-12!22;UBERON:0003101!2.15e-08!22;UBERON:0000079!2.15e-08!22;UBERON:0004458!9.13e-08!49 | |ontology_enrichment_uberon=UBERON:0000473!1.17e-22!8;UBERON:0003135!1.45e-16!11;UBERON:0000991!3.42e-13!21;UBERON:0009196!3.42e-13!21;UBERON:0009117!3.42e-13!21;UBERON:0005564!3.42e-13!21;UBERON:0004176!1.37e-12!22;UBERON:0003101!2.15e-08!22;UBERON:0000079!2.15e-08!22;UBERON:0004458!9.13e-08!49 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.80e-27;8!UBERON:0003135;1.15e-19;11!UBERON:0000991;9.52e-16;21!UBERON:0000922;2.55e-13;49!UBERON:0003101;5.57e-10;22!UBERON:0000079;5.57e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.80e-27,8;UBERON:0003135,1.15e-19,11;UBERON:0000991,9.52e-16,21;UBERON:0009196,9.52e-16,21;UBERON:0009117,9.52e-16,21;UBERON:0005564,9.52e-16,21;UBERON:0004176,4.93e-15,22;UBERON:0003101,5.57e-10,22;UBERON:0000079,5.57e-10,22;UBERON:0002323,3.65e-07,46;UBERON:0003133,7.33e-07,48 | |||
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|short_description=p8@SENP2 | |short_description=p8@SENP2 | ||
}} | }} |
Latest revision as of 03:52, 17 September 2015
Short description: | p8@SENP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SENP2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -20bp_to_ENST00000430355_5end |
EntrezGene: | SENP2 |
HGNC: | 23116 |
UniProt: | C9IYB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.62e-66 | 5 |
germ line cell | 1.13e-30 | 7 |
germ cell | 1.13e-30 | 7 |
neuron | 2.42e-20 | 6 |
neuroblast | 2.42e-20 | 6 |
electrically signaling cell | 2.42e-20 | 6 |
neuronal stem cell | 2.00e-15 | 8 |
melanocyte | 1.22e-12 | 10 |
melanoblast | 1.22e-12 | 10 |
pigment cell | 3.44e-09 | 14 |
neurectodermal cell | 1.60e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 6.80e-27 | 8 |
male reproductive organ | 1.15e-19 | 11 |
gonad | 9.52e-16 | 21 |
indifferent external genitalia | 9.52e-16 | 21 |
indifferent gonad | 9.52e-16 | 21 |
gonad primordium | 9.52e-16 | 21 |
external genitalia | 4.93e-15 | 22 |
male organism | 5.57e-10 | 22 |
male reproductive system | 5.57e-10 | 22 |
body cavity | 3.65e-07 | 46 |
reproductive organ | 7.33e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.70e-21 | 22 |
germ cell cancer | 2.70e-21 | 22 |