FFCP PHASE1:Hg19::chr4:154125565..154125626,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23321 | |EntrezGene=23321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15974 | |HGNC=15974 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C040,D3DP09 | |UniProt=Q9C040,D3DP09 | ||
|association_with_transcript=0bp_to_ENST00000338700,ENST00000479711,ENST00000494872,ENST00000496978,NM_015271,uc003inh.2_5end | |association_with_transcript=0bp_to_ENST00000338700,ENST00000479711,ENST00000494872,ENST00000496978,NM_015271,uc003inh.2_5end | ||
|cluster_id=chr4:154125565..154125626,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_TRIM2_5end | |description=CAGE_peak_1_at_TRIM2_5end | ||
|id=chr4:154125565..154125626,+ | |id=chr4:154125565..154125626,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.37e-10;82 | |||
|ontology_enrichment_disease=DOID:299!8.39e-07!25 | |ontology_enrichment_disease=DOID:299!8.39e-07!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.65e-34!82;UBERON:0005743!1.00e-33!86;UBERON:0001049!1.90e-33!57;UBERON:0005068!1.90e-33!57;UBERON:0006241!1.90e-33!57;UBERON:0007135!1.90e-33!57;UBERON:0007023!4.81e-33!115;UBERON:0002616!7.46e-32!59;UBERON:0002346!3.07e-31!90;UBERON:0000073!4.00e-30!94;UBERON:0001016!4.00e-30!94;UBERON:0003075!6.14e-30!86;UBERON:0007284!6.14e-30!86;UBERON:0000955!1.82e-29!69;UBERON:0006238!1.82e-29!69;UBERON:0000481!1.56e-27!347;UBERON:0000033!1.54e-25!123;UBERON:0000475!6.38e-25!365;UBERON:0000153!1.06e-24!129;UBERON:0007811!1.06e-24!129;UBERON:0003080!1.77e-24!42;UBERON:0002780!2.05e-24!41;UBERON:0001890!2.05e-24!41;UBERON:0006240!2.05e-24!41;UBERON:0003056!2.59e-23!61;UBERON:0000924!3.04e-23!173;UBERON:0006601!3.04e-23!173;UBERON:0004121!5.00e-22!169;UBERON:0001893!1.17e-21!34;UBERON:0002020!1.25e-21!34;UBERON:0003528!1.25e-21!34;UBERON:0000119!3.46e-21!312;UBERON:0000064!4.82e-21!219;UBERON:0002791!5.66e-21!33;UBERON:0000483!6.94e-21!309;UBERON:0000062!2.32e-20!511;UBERON:0000477!3.04e-20!286;UBERON:0001869!3.40e-20!32;UBERON:0004111!4.84e-17!241;UBERON:0000025!9.64e-17!194;UBERON:0000468!4.86e-16!659;UBERON:0000956!1.34e-15!25;UBERON:0000203!1.34e-15!25;UBERON:0002619!2.07e-14!22;UBERON:0000922!3.18e-14!612;UBERON:0001950!3.86e-13!20;UBERON:0000480!1.59e-12!626;UBERON:0000467!1.69e-12!625;UBERON:0002050!2.05e-12!605;UBERON:0005423!2.05e-12!605;UBERON:0000923!3.98e-12!604;UBERON:0005291!3.98e-12!604;UBERON:0006598!3.98e-12!604;UBERON:0002532!3.98e-12!604;UBERON:0003076!5.30e-10!15;UBERON:0003057!5.30e-10!15;UBERON:0004732!8.14e-09!13;UBERON:0004733!4.20e-08!12;UBERON:0002028!4.20e-08!12;UBERON:0007277!4.20e-08!12;UBERON:0002308!1.58e-07!9;UBERON:0000125!1.58e-07!9;UBERON:0003103!1.95e-07!69;UBERON:0002420!2.44e-07!9;UBERON:0007245!2.44e-07!9;UBERON:0010009!2.44e-07!9;UBERON:0010011!2.44e-07!9;UBERON:0000454!2.44e-07!9;UBERON:0000063!2.66e-07!97 | |ontology_enrichment_uberon=UBERON:0001017!3.65e-34!82;UBERON:0005743!1.00e-33!86;UBERON:0001049!1.90e-33!57;UBERON:0005068!1.90e-33!57;UBERON:0006241!1.90e-33!57;UBERON:0007135!1.90e-33!57;UBERON:0007023!4.81e-33!115;UBERON:0002616!7.46e-32!59;UBERON:0002346!3.07e-31!90;UBERON:0000073!4.00e-30!94;UBERON:0001016!4.00e-30!94;UBERON:0003075!6.14e-30!86;UBERON:0007284!6.14e-30!86;UBERON:0000955!1.82e-29!69;UBERON:0006238!1.82e-29!69;UBERON:0000481!1.56e-27!347;UBERON:0000033!1.54e-25!123;UBERON:0000475!6.38e-25!365;UBERON:0000153!1.06e-24!129;UBERON:0007811!1.06e-24!129;UBERON:0003080!1.77e-24!42;UBERON:0002780!2.05e-24!41;UBERON:0001890!2.05e-24!41;UBERON:0006240!2.05e-24!41;UBERON:0003056!2.59e-23!61;UBERON:0000924!3.04e-23!173;UBERON:0006601!3.04e-23!173;UBERON:0004121!5.00e-22!169;UBERON:0001893!1.17e-21!34;UBERON:0002020!1.25e-21!34;UBERON:0003528!1.25e-21!34;UBERON:0000119!3.46e-21!312;UBERON:0000064!4.82e-21!219;UBERON:0002791!5.66e-21!33;UBERON:0000483!6.94e-21!309;UBERON:0000062!2.32e-20!511;UBERON:0000477!3.04e-20!286;UBERON:0001869!3.40e-20!32;UBERON:0004111!4.84e-17!241;UBERON:0000025!9.64e-17!194;UBERON:0000468!4.86e-16!659;UBERON:0000956!1.34e-15!25;UBERON:0000203!1.34e-15!25;UBERON:0002619!2.07e-14!22;UBERON:0000922!3.18e-14!612;UBERON:0001950!3.86e-13!20;UBERON:0000480!1.59e-12!626;UBERON:0000467!1.69e-12!625;UBERON:0002050!2.05e-12!605;UBERON:0005423!2.05e-12!605;UBERON:0000923!3.98e-12!604;UBERON:0005291!3.98e-12!604;UBERON:0006598!3.98e-12!604;UBERON:0002532!3.98e-12!604;UBERON:0003076!5.30e-10!15;UBERON:0003057!5.30e-10!15;UBERON:0004732!8.14e-09!13;UBERON:0004733!4.20e-08!12;UBERON:0002028!4.20e-08!12;UBERON:0007277!4.20e-08!12;UBERON:0002308!1.58e-07!9;UBERON:0000125!1.58e-07!9;UBERON:0003103!1.95e-07!69;UBERON:0002420!2.44e-07!9;UBERON:0007245!2.44e-07!9;UBERON:0010009!2.44e-07!9;UBERON:0010011!2.44e-07!9;UBERON:0000454!2.44e-07!9;UBERON:0000063!2.66e-07!97 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.13e-21;34!UBERON:0003528;7.69e-21;34!UBERON:0002020;7.69e-21;34!UBERON:0002791;1.21e-20;32!UBERON:0001869;1.28e-20;32!UBERON:0000073;4.98e-20;53!UBERON:0002616;4.98e-20;53!UBERON:0002780;6.07e-20;41!UBERON:0001890;6.07e-20;41!UBERON:0000956;1.97e-17;25!UBERON:0000203;1.97e-17;25!UBERON:0002619;4.37e-16;22!UBERON:0001950;1.19e-14;20!UBERON:0001017;5.09e-14;75!UBERON:0000955;7.55e-14;68!UBERON:0001016;9.25e-12;83!UBERON:0007023;1.44e-10;114!UBERON:0004732;8.47e-10;13!UBERON:0005409;1.02e-09;22!UBERON:0011216;2.85e-09;132!UBERON:0004733;5.42e-09;12!UBERON:0002028;5.42e-09;12!UBERON:0000160;6.50e-09;17!UBERON:0000125;2.56e-08;9!UBERON:0002308;2.56e-08;9!UBERON:0004921;2.99e-08;33!UBERON:0002420;4.17e-08;9!UBERON:0007245;4.17e-08;9!UBERON:0010009;4.17e-08;9!UBERON:0010011;4.17e-08;9!UBERON:0000454;4.17e-08;9!UBERON:0009663;9.06e-07;7!UBERON:0000059;9.08e-07;11!UBERON:0002680;9.86e-07;9!UBERON:0001895;9.86e-07;9 | |||
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|short_description=p1@TRIM2 | |short_description=p1@TRIM2 | ||
}} | }} |
Latest revision as of 04:06, 16 September 2015
Short description: | p1@TRIM2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000338700, ENST00000479711, ENST00000494872, ENST00000496978, NM_015271, uc003inh.2_5end |
EntrezGene: | TRIM2 |
HGNC: | 15974 |
UniProt: | Q9C040D3DP09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data