FFCP PHASE1:Hg19::chr4:83763487..83763502,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22872 | |EntrezGene=22872 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17052 | |HGNC=17052 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=474bp_to_ENST00000515749_5end | |association_with_transcript=474bp_to_ENST00000515749_5end | ||
|cluster_id=chr4:83763487..83763502,- | |||
|coexpression_cluster_id=C370 | |coexpression_cluster_id=C370 | ||
|description=CAGE_peak_16_at_SEC31A_5end | |description=CAGE_peak_16_at_SEC31A_5end | ||
|id=chr4:83763487..83763502,- | |id=chr4:83763487..83763502,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;7.47e-11;3!CL:0000511;1.32e-08;1!CL:0002625;1.32e-08;1!CL:0000216;1.32e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,5.98e-11,3;CL:0000511,8.36e-09,1;CL:0002625,8.36e-09,1;CL:0000216,8.36e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.32e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8552;1.32e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,1.65e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.40e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!7.40e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.85e-24;15!UBERON:0000179;3.85e-24;15!UBERON:0000463;3.85e-24;15!UBERON:0002390;4.97e-13;32!UBERON:0000998;1.32e-08;1!UBERON:0001136;1.32e-08;1!UBERON:0001343;1.32e-08;1!UBERON:0007195;1.32e-08;1!UBERON:0006868;1.32e-08;1!UBERON:0004910;1.32e-08;1!UBERON:0004813;1.32e-08;1!UBERON:0005904;3.34e-08;4!UBERON:0002193;4.10e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.19e-24,15;UBERON:0000179,5.19e-24,15;UBERON:0000463,5.19e-24,15;UBERON:0000998,7.75e-09,1;UBERON:0006868,7.75e-09,1;UBERON:0001136,8.36e-09,1;UBERON:0001343,8.36e-09,1;UBERON:0004910,8.36e-09,1;UBERON:0005154,8.36e-09,1;UBERON:0005295,8.36e-09,1;UBERON:0004813,8.36e-09,1;UBERON:0005297,8.36e-09,1;UBERON:0005294,8.36e-09,1;UBERON:0010141,8.36e-09,1;UBERON:0005891,8.36e-09,1;UBERON:0007195,1.91e-08,1;UBERON:0005904,2.07e-08,4 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,1.12101712596307,5.26768169550154,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0.71153252537342,0,0,1.52054421143703,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0,0.576175924479999,0,0,0.570471821544449,0.298897361103602,0.117434498643765,0,0.280901613404497,0.408308342509787,0.491337269247072,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0.150238058906597,0.113432183160021,0,0.640672166455702,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0.365921118388786,0,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0.928735856063958,0,0.354920400119532,0,0,0,0,0,0.539325232640658,0,0,0.738155454624648,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0.329250856225877,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0.925971025153221,0,0,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,0.207328115540772,0.288239906833923,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,2.43247561282381,1.00451418286425,0,0,0,0,0.289562613335158,0.205476322550383,0,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,1.49801404789436,2.99161459204025,0,0,0,0,0,0.535286966391485,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.184369168541703,0.260650843404249,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0.308419387605311,0.532685175939381,0,0,0,0.120859449591622,1.40354529212299,0.736647911487171,0.34444334449382,0,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0,0,0.328014645699706,0,0.206082023295445,0.183138929636687,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0.308097234229289,0,0.137836572484531,0.107420244868274,0.435050081742686,0.340906509664404,0.178064071293475,0.661139661443912,0,0.127612712494584,0.30347334256665,0.464845549297286,1.25924938732256,0,0.308033580176089,0,0.869932992075073,0,0,0.372158369359667,0,0.190630193923825,0,1.28381696410176,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0.404364963146632,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.229723400206959,5.07447609232169,3.0585488285695,0.569647187174163,5.95579438644473,4.93634727703433,3.24236655596359,1.08006287447623,0.79312517629427,0.106824071127473,0.962479855263359,0.245040215981032,0.185803175125719,0,0.142283686696828,0,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0,0,0.338583555603207,0.321176150207399,0.403599414382095,0.425846237690326,0.343505344755765,0,0,0,0,0.278406173895242,0,0.540911356951966,0,149.44622539312,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0.20453736500431,0,0.311039587661807,0,0,0,0.295930216910801,2.3948309234694,1.11136990144637,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0.291604613383254,0,0.885741385813839,0.241192877250816,0,0.331737779793674,0.295547618953547,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,1.16348177330109,0.451191321234361,0.19606253431774,0,0.37950746544837,0,0,0.163232808159148,0.141353071433941,0.432777279484182,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.52418000472609,0,0,0.0730893170861856,0.0821154570532092,0,0,0.451961481561065,0.137041924646751,0,0,0.391102765469606,0.0801588202515337,0.426905989478705,0.39961921916426,0,0,0,0.14405479798815,0,0.235694034616795,0,0.313808538937,0.509991088181609,0,0,0.136905378891993,0,0,0.26288735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| ||
|short_description=p16@SEC31A | |short_description=p16@SEC31A | ||
}} | }} |
Latest revision as of 01:16, 19 September 2015
Short description: | p16@SEC31A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SEC31A_5end |
Coexpression cluster: | C370_acute_chronic_leukemia_CD34_testicular_Mast_H9 |
Association with transcript: | 474bp_to_ENST00000515749_5end |
EntrezGene: | SEC31A |
HGNC: | 17052 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 5.98e-11 | 3 |
androgen binding protein secreting cell | 8.36e-09 | 1 |
seminiferous tubule epithelial cell | 8.36e-09 | 1 |
Sertoli cell | 8.36e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 5.19e-24 | 15 |
haemolymphatic fluid | 5.19e-24 | 15 |
organism substance | 5.19e-24 | 15 |
seminal vesicle | 7.75e-09 | 1 |
seminal fluid secreting gland | 7.75e-09 | 1 |
mesothelium | 8.36e-09 | 1 |
seminiferous tubule of testis | 8.36e-09 | 1 |
epithelium of male gonad | 8.36e-09 | 1 |
epithelial cord | 8.36e-09 | 1 |
sex cord | 8.36e-09 | 1 |
seminiferous tubule epithelium | 8.36e-09 | 1 |
testis sex cord | 8.36e-09 | 1 |
genital ridge | 8.36e-09 | 1 |
primitive sex cord of indifferent gonad | 8.36e-09 | 1 |
coelomic epithelium | 8.36e-09 | 1 |
stroma of bone marrow | 1.91e-08 | 1 |
duct of male reproductive system | 2.07e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 1.65e-08 | 1 |