FFCP PHASE1:Hg19::chr5:150004188..150004308,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11346 | |EntrezGene=11346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30672 | |HGNC=30672 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000518872_5end | |association_with_transcript=0bp_to_ENST00000518872_5end | ||
|cluster_id=chr5:150004188..150004308,+ | |||
|coexpression_cluster_id=C713 | |coexpression_cluster_id=C713 | ||
|description=CAGE_peak_1_at_SYNPO_5end | |description=CAGE_peak_1_at_SYNPO_5end | ||
|id=chr5:150004188..150004308,+ | |id=chr5:150004188..150004308,+ | ||
|ontology_enrichment_celltype=CL:0000222!2.92e-09!119;CL:0002139!1.51e-07!24;CL:0000359!2.38e-07!32;CL:0000115!9.68e-07!35 | |ontology_enrichment_celltype=CL:0000222!2.92e-09!119;CL:0002139!1.51e-07!24;CL:0000359!2.38e-07!32;CL:0000115!9.68e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.12e-07;24!CL:0000359;3.09e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.91e-09,121;CL:0002139,1.09e-07,24;CL:0000359,1.43e-07,32;CL:0000115,7.04e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.07e-37!241;UBERON:0007023!8.17e-35!115;UBERON:0000477!4.22e-34!286;UBERON:0000025!1.64e-31!194;UBERON:0000483!1.03e-27!309;UBERON:0000119!2.08e-27!312;UBERON:0000481!3.89e-22!347;UBERON:0004872!2.23e-20!84;UBERON:0003914!2.70e-18!118;UBERON:0000475!3.59e-18!365;UBERON:0000055!1.37e-17!69;UBERON:0003075!2.23e-17!86;UBERON:0007284!2.23e-17!86;UBERON:0001009!5.02e-17!113;UBERON:0002346!1.16e-16!90;UBERON:0002049!4.14e-16!79;UBERON:0007798!4.14e-16!79;UBERON:0001981!4.60e-16!60;UBERON:0007500!4.60e-16!60;UBERON:0004537!4.60e-16!60;UBERON:0006965!4.60e-16!60;UBERON:0001049!1.03e-15!57;UBERON:0005068!1.03e-15!57;UBERON:0006241!1.03e-15!57;UBERON:0007135!1.03e-15!57;UBERON:0004535!1.68e-15!110;UBERON:0003080!5.22e-14!42;UBERON:0002616!7.16e-14!59;UBERON:0002780!9.41e-14!41;UBERON:0001890!9.41e-14!41;UBERON:0006240!9.41e-14!41;UBERON:0000955!4.00e-13!69;UBERON:0006238!4.00e-13!69;UBERON:0000033!6.61e-13!123;UBERON:0005743!7.10e-13!86;UBERON:0001893!9.14e-13!34;UBERON:0001869!1.03e-12!32;UBERON:0007100!1.15e-12!27;UBERON:0003056!1.18e-12!61;UBERON:0002020!1.56e-12!34;UBERON:0003528!1.56e-12!34;UBERON:0001017!1.64e-12!82;UBERON:0000153!1.83e-12!129;UBERON:0007811!1.83e-12!129;UBERON:0002791!3.30e-12!33;UBERON:0001637!1.24e-11!42;UBERON:0003509!1.24e-11!42;UBERON:0004572!1.24e-11!42;UBERON:0003103!2.05e-11!69;UBERON:0000467!2.81e-11!625;UBERON:0000468!3.26e-11!659;UBERON:0000480!3.38e-11!626;UBERON:0000073!4.70e-11!94;UBERON:0001016!4.70e-11!94;UBERON:0000490!8.65e-11!138;UBERON:0000948!9.91e-11!24;UBERON:0005498!9.91e-11!24;UBERON:0004140!9.91e-11!24;UBERON:0009881!9.91e-11!24;UBERON:0004141!9.91e-11!24;UBERON:0003084!9.91e-11!24;UBERON:0007005!9.91e-11!24;UBERON:0004139!9.91e-11!24;UBERON:0004291!9.91e-11!24;UBERON:0002619!1.39e-10!22;UBERON:0000956!1.57e-09!25;UBERON:0000203!1.57e-09!25;UBERON:0001950!1.58e-09!20;UBERON:0004573!1.50e-08!33;UBERON:0004571!1.50e-08!33;UBERON:0002050!1.70e-08!605;UBERON:0005423!1.70e-08!605;UBERON:0000923!1.84e-08!604;UBERON:0005291!1.84e-08!604;UBERON:0006598!1.84e-08!604;UBERON:0002532!1.84e-08!604;UBERON:0004121!2.20e-08!169;UBERON:0000922!2.66e-08!612;UBERON:0000924!3.27e-08!173;UBERON:0006601!3.27e-08!173;UBERON:0000064!5.58e-07!219 | |ontology_enrichment_uberon=UBERON:0004111!4.07e-37!241;UBERON:0007023!8.17e-35!115;UBERON:0000477!4.22e-34!286;UBERON:0000025!1.64e-31!194;UBERON:0000483!1.03e-27!309;UBERON:0000119!2.08e-27!312;UBERON:0000481!3.89e-22!347;UBERON:0004872!2.23e-20!84;UBERON:0003914!2.70e-18!118;UBERON:0000475!3.59e-18!365;UBERON:0000055!1.37e-17!69;UBERON:0003075!2.23e-17!86;UBERON:0007284!2.23e-17!86;UBERON:0001009!5.02e-17!113;UBERON:0002346!1.16e-16!90;UBERON:0002049!4.14e-16!79;UBERON:0007798!4.14e-16!79;UBERON:0001981!4.60e-16!60;UBERON:0007500!4.60e-16!60;UBERON:0004537!4.60e-16!60;UBERON:0006965!4.60e-16!60;UBERON:0001049!1.03e-15!57;UBERON:0005068!1.03e-15!57;UBERON:0006241!1.03e-15!57;UBERON:0007135!1.03e-15!57;UBERON:0004535!1.68e-15!110;UBERON:0003080!5.22e-14!42;UBERON:0002616!7.16e-14!59;UBERON:0002780!9.41e-14!41;UBERON:0001890!9.41e-14!41;UBERON:0006240!9.41e-14!41;UBERON:0000955!4.00e-13!69;UBERON:0006238!4.00e-13!69;UBERON:0000033!6.61e-13!123;UBERON:0005743!7.10e-13!86;UBERON:0001893!9.14e-13!34;UBERON:0001869!1.03e-12!32;UBERON:0007100!1.15e-12!27;UBERON:0003056!1.18e-12!61;UBERON:0002020!1.56e-12!34;UBERON:0003528!1.56e-12!34;UBERON:0001017!1.64e-12!82;UBERON:0000153!1.83e-12!129;UBERON:0007811!1.83e-12!129;UBERON:0002791!3.30e-12!33;UBERON:0001637!1.24e-11!42;UBERON:0003509!1.24e-11!42;UBERON:0004572!1.24e-11!42;UBERON:0003103!2.05e-11!69;UBERON:0000467!2.81e-11!625;UBERON:0000468!3.26e-11!659;UBERON:0000480!3.38e-11!626;UBERON:0000073!4.70e-11!94;UBERON:0001016!4.70e-11!94;UBERON:0000490!8.65e-11!138;UBERON:0000948!9.91e-11!24;UBERON:0005498!9.91e-11!24;UBERON:0004140!9.91e-11!24;UBERON:0009881!9.91e-11!24;UBERON:0004141!9.91e-11!24;UBERON:0003084!9.91e-11!24;UBERON:0007005!9.91e-11!24;UBERON:0004139!9.91e-11!24;UBERON:0004291!9.91e-11!24;UBERON:0002619!1.39e-10!22;UBERON:0000956!1.57e-09!25;UBERON:0000203!1.57e-09!25;UBERON:0001950!1.58e-09!20;UBERON:0004573!1.50e-08!33;UBERON:0004571!1.50e-08!33;UBERON:0002050!1.70e-08!605;UBERON:0005423!1.70e-08!605;UBERON:0000923!1.84e-08!604;UBERON:0005291!1.84e-08!604;UBERON:0006598!1.84e-08!604;UBERON:0002532!1.84e-08!604;UBERON:0004121!2.20e-08!169;UBERON:0000922!2.66e-08!612;UBERON:0000924!3.27e-08!173;UBERON:0006601!3.27e-08!173;UBERON:0000064!5.58e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.67e-12;25!UBERON:0001869;9.71e-12;32!UBERON:0001893;1.44e-11;34!UBERON:0002791;2.92e-11;32!UBERON:0003528;3.54e-11;34!UBERON:0002020;3.54e-11;34!UBERON:0002619;8.70e-11;22!UBERON:0002780;2.62e-10;41!UBERON:0001890;2.62e-10;41!UBERON:0000948;4.41e-10;22!UBERON:0000956;9.80e-10;25!UBERON:0000203;9.80e-10;25!UBERON:0001950;1.05e-09;20!UBERON:0007023;2.55e-09;114!UBERON:0000073;6.01e-09;53!UBERON:0002616;6.01e-09;53!UBERON:0001637;7.92e-09;42!UBERON:0003509;7.92e-09;42!UBERON:0004572;7.92e-09;42!UBERON:0000055;1.98e-08;65!UBERON:0007500;2.98e-08;56!UBERON:0001981;2.98e-08;56!UBERON:0004537;2.98e-08;56!UBERON:0004573;8.44e-08;33!UBERON:0004571;8.44e-08;33!UBERON:0002049;4.72e-07;75!UBERON:0007798;4.72e-07;75 | |||
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| ||
|short_description=p1@SYNPO | |short_description=p1@SYNPO | ||
}} | }} |
Latest revision as of 05:18, 16 September 2015
Short description: | p1@SYNPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYNPO_5end |
Coexpression cluster: | C713_skeletal_heart_Renal_aorta_Fibroblast_Smooth_mature |
Association with transcript: | 0bp_to_ENST00000518872_5end |
EntrezGene: | SYNPO |
HGNC: | 30672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.91e-09 | 121 |
endothelial cell of vascular tree | 1.09e-07 | 24 |
vascular associated smooth muscle cell | 1.43e-07 | 32 |
endothelial cell | 7.04e-07 | 36 |