FFCP PHASE1:Hg19::chr7:105332361..105332378,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222255 | |EntrezGene=222255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22210 | |HGNC=22210 | ||
|TSSclassifier=strong | |||
|UniProt=C9K0V9 | |UniProt=C9K0V9 | ||
|association_with_transcript=-277bp_to_ENST00000472195_5end | |association_with_transcript=-277bp_to_ENST00000472195_5end | ||
|cluster_id=chr7:105332361..105332378,- | |||
|coexpression_cluster_id=C4638 | |coexpression_cluster_id=C4638 | ||
|description=CAGE_peak_10_at_ATXN7L1_5end | |description=CAGE_peak_10_at_ATXN7L1_5end | ||
|id=chr7:105332361..105332378,- | |id=chr7:105332361..105332378,- | ||
|ontology_enrichment_celltype=CL:0000791!1.07e-15!18;CL:0000789!1.07e-15!18;CL:0002420!1.07e-15!18;CL:0002419!1.07e-15!18;CL:0000790!1.07e-15!18;CL:0000624!4.62e-14!6;CL:0002322!3.73e-12!5;CL:0000738!8.38e-12!140;CL:0002087!6.52e-11!119;CL:0000084!2.03e-10!25;CL:0000827!2.03e-10!25;CL:0002393!3.57e-10!9;CL:0002397!3.57e-10!9;CL:0002031!2.83e-09!124;CL:0000037!4.49e-09!172;CL:0000566!4.49e-09!172;CL:0000542!5.79e-09!53;CL:0000051!5.79e-09!53;CL:0000838!3.70e-08!52;CL:0000898!4.04e-08!3;CL:0000988!4.83e-08!182;CL:0000623!1.63e-07!3;CL:0000825!1.63e-07!3;CL:0002032!3.26e-07!165;CL:0000837!3.26e-07!165;CL:0000842!6.43e-07!3 | |ontology_enrichment_celltype=CL:0000791!1.07e-15!18;CL:0000789!1.07e-15!18;CL:0002420!1.07e-15!18;CL:0002419!1.07e-15!18;CL:0000790!1.07e-15!18;CL:0000624!4.62e-14!6;CL:0002322!3.73e-12!5;CL:0000738!8.38e-12!140;CL:0002087!6.52e-11!119;CL:0000084!2.03e-10!25;CL:0000827!2.03e-10!25;CL:0002393!3.57e-10!9;CL:0002397!3.57e-10!9;CL:0002031!2.83e-09!124;CL:0000037!4.49e-09!172;CL:0000566!4.49e-09!172;CL:0000542!5.79e-09!53;CL:0000051!5.79e-09!53;CL:0000838!3.70e-08!52;CL:0000898!4.04e-08!3;CL:0000988!4.83e-08!182;CL:0000623!1.63e-07!3;CL:0000825!1.63e-07!3;CL:0002032!3.26e-07!165;CL:0000837!3.26e-07!165;CL:0000842!6.43e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002322;9.29e-33;5!CL:0000791;1.76e-27;18!CL:0000789;1.76e-27;18!CL:0002419;1.76e-27;18!CL:0000624;2.53e-27;6!CL:0000898;8.18e-21;3!CL:0000084;2.14e-19;25!CL:0000039;1.03e-15;7!CL:0000586;1.03e-15;7!CL:0000815;1.14e-14;2!CL:0000792;1.14e-14;2!CL:0002677;1.14e-14;2!CL:0002321;8.12e-11;15!CL:0000542;1.35e-09;53!CL:0000625;2.60e-09;11!CL:0000623;2.62e-09;3!CL:0000895;6.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.17e-33,5;CL:0000624,1.78e-27,6;CL:0000791,1.79e-27,18;CL:0000789,1.79e-27,18;CL:0002420,1.79e-27,18;CL:0002419,1.79e-27,18;CL:0000790,1.79e-27,18;CL:0000898,6.94e-21,3;CL:0000084,2.16e-19,25;CL:0000827,2.16e-19,25;CL:0000039,1.11e-15,7;CL:0000586,1.11e-15,7;CL:0000838,2.05e-15,52;CL:0000542,4.41e-15,53;CL:0000051,4.41e-15,53;CL:0000815,1.03e-14,2;CL:0000792,1.03e-14,2;CL:0002677,1.03e-14,2;CL:0000623,2.73e-09,3;CL:0000825,2.73e-09,3;CL:0000625,3.04e-09,11;CL:0000810,6.52e-08,1;CL:0000895,6.52e-08,1;CL:0002436,6.52e-08,1;CL:0002427,6.52e-08,1;CL:0002428,6.52e-08,1;CL:0002429,6.52e-08,1;CL:0002433,6.52e-08,1;CL:0002431,6.52e-08,1;CL:0002432,6.52e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.76e-27;18!UBERON:0009117;4.87e-11;10!UBERON:0005564;4.87e-11;10!CL:0000051;1.35e-09;53!CL:0002427;6.97e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.36e-08!34;UBERON:0001869!6.19e-08!32;UBERON:0002791!9.73e-08!33;UBERON:0000473!3.25e-07!8;UBERON:0003135!7.00e-07!11 | |ontology_enrichment_uberon=UBERON:0001893!1.36e-08!34;UBERON:0001869!6.19e-08!32;UBERON:0002791!9.73e-08!33;UBERON:0000473!3.25e-07!8;UBERON:0003135!7.00e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.09e-14;8!UBERON:0003135;4.80e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.71e-14,8;UBERON:0003135,5.04e-10,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.44931452458598,0.150176892841506,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0.546138611262131,1.77901850772711,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,1.96505381374582,2.05601498999509,0,3.58514493296949,3.31413464014313,0,0.111410456885174,6.18672405697158,5.53834736459053,2.70803863765016,0.512365278902701,0,0,0.276350017785848,0.289803085735052,1.63115219478266,1.60524496853828,2.09071047609954,0,2.29932296161153,2.40539211837841,1.51811815211702,0.318565414324097,0,0,0,0.255973222308837,1.24930726552346,0,0,1.61285394579786,1.33720097891754,1.73789284659359,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97671160035017,2.12047629314376,3.71820617182459,1.65857688024593,2.01856680700503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,1.72502059887614,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,1.60753148465019,0.962776056180637,3.32352270423348,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0.33946505990805,0,0.619678821295011,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,4.07955318967927,3.20660886318673,3.49200618232411,4.51273570726275,0,0.267964130156178,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.44931452458598,0.150176892841506,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0.546138611262131,1.77901850772711,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,1.96505381374582,2.05601498999509,0,3.58514493296949,3.31413464014313,0,0.111410456885174,6.18672405697158,5.53834736459053,2.70803863765016,0.512365278902701,0,0,0.276350017785848,0.289803085735052,1.63115219478266,1.60524496853828,2.09071047609954,0,2.29932296161153,2.40539211837841,1.51811815211702,0.318565414324097,0,0,0,0.255973222308837,1.24930726552346,0,0,1.61285394579786,1.33720097891754,1.73789284659359,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97671160035017,2.12047629314376,3.71820617182459,1.65857688024593,2.01856680700503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,1.72502059887614,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,1.60753148465019,0.962776056180637,3.32352270423348,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0.33946505990805,0,0.619678821295011,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,4.07955318967927,3.20660886318673,3.49200618232411,4.51273570726275,0,0.267964130156178,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p10@ATXN7L1 | |short_description=p10@ATXN7L1 | ||
}} | }} |
Latest revision as of 21:49, 24 September 2015
Short description: | p10@ATXN7L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ATXN7L1_5end |
Coexpression cluster: | C4638_CD4_testicular_H9_iPS_CD8_Natural_Basophils |
Association with transcript: | -277bp_to_ENST00000472195_5end |
EntrezGene: | ATXN7L1 |
HGNC: | 22210 |
UniProt: | C9K0V9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 9.71e-14 | 8 |
male reproductive organ | 5.04e-10 | 11 |