FFCP PHASE1:Hg19::chr19:43698658..43698695,-: Difference between revisions
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|id=chr19:43698658..43698695,-
|short_description=p6@PSG4
|description=CAGE_peak_6_at_PSG4_5end
|association_with_transcript=342bp_to_ENST00000490769_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5672 | |EntrezGene=5672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9521 | |HGNC=9521 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=342bp_to_ENST00000490769_5end | |||
|cluster_id=chr19:43698658..43698695,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_6_at_PSG4_5end | |||
|id=chr19:43698658..43698695,- | |||
|ontology_enrichment_celltype=CL:0002620!3.23e-11!23;CL:0002539!1.70e-09!10;CL:0000057!1.50e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000197;3.36e-14;6!CL:0000098;3.36e-14;6!CL:0002167;3.36e-14;6!CL:0002539;8.28e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.97e-14,6;CL:0000098,3.97e-14,6;CL:0002167,3.97e-14,6;CL:0002539,7.66e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.53e-21;1 | |||
|ontology_enrichment_disease=DOID:17!2.30e-07!5;DOID:450!2.30e-07!5;DOID:66!2.30e-07!5;DOID:423!2.30e-07!5;DOID:0080000!2.30e-07!5;DOID:11722!2.30e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!1.37e-10!40;UBERON:0004237!1.70e-09!10;UBERON:0004695!1.70e-09!10;UBERON:0002111!1.70e-09!10;UBERON:0004178!1.70e-09!10;UBERON:0002199!3.89e-09!45;UBERON:0002416!3.89e-09!45;UBERON:0000947!6.31e-08!21;UBERON:0010191!6.31e-08!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;8.28e-09;10!UBERON:0004695;8.28e-09;10!UBERON:0002111;8.28e-09;10!UBERON:0004178;8.28e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,7.66e-09,10;UBERON:0004695,7.66e-09,10;UBERON:0002111,7.66e-09,10;UBERON:0004178,7.66e-09,10 | |||
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| ||
|short_description=p6@PSG4 | |||
}} | }} |
Latest revision as of 10:33, 18 September 2015
Short description: | p6@PSG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PSG4_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 342bp_to_ENST00000490769_5end |
EntrezGene: | PSG4 |
HGNC: | 9521 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.97e-14 | 6 |
sensory epithelial cell | 3.97e-14 | 6 |
olfactory epithelial cell | 3.97e-14 | 6 |
aortic smooth muscle cell | 7.66e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 7.66e-09 | 10 |
arterial system smooth muscle | 7.66e-09 | 10 |
artery smooth muscle tissue | 7.66e-09 | 10 |
aorta smooth muscle tissue | 7.66e-09 | 10 |