FFCP PHASE1:Hg19::chr7:83278414..83278504,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9723 | |EntrezGene=9723 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10727 | |HGNC=10727 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6U0,O15041 | |UniProt=F5H6U0,O15041 | ||
|association_with_transcript=0bp_to_ENST00000541514,NM_012431_5end | |association_with_transcript=0bp_to_ENST00000541514,NM_012431_5end | ||
|cluster_id=chr7:83278414..83278504,- | |||
|coexpression_cluster_id=C1540 | |coexpression_cluster_id=C1540 | ||
|description=CAGE_peak_1_at_SEMA3E_5end | |description=CAGE_peak_1_at_SEMA3E_5end | ||
|id=chr7:83278414..83278504,- | |id=chr7:83278414..83278504,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.78e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.48e-28!115;UBERON:0003075!1.76e-23!86;UBERON:0007284!1.76e-23!86;UBERON:0001049!1.77e-23!57;UBERON:0005068!1.77e-23!57;UBERON:0006241!1.77e-23!57;UBERON:0007135!1.77e-23!57;UBERON:0005743!3.13e-22!86;UBERON:0002346!9.41e-22!90;UBERON:0001017!1.54e-20!82;UBERON:0000073!1.73e-20!94;UBERON:0001016!1.73e-20!94;UBERON:0002616!3.49e-20!59;UBERON:0003056!1.61e-18!61;UBERON:0003080!2.69e-18!42;UBERON:0000955!3.14e-18!69;UBERON:0006238!3.14e-18!69;UBERON:0002780!8.65e-18!41;UBERON:0001890!8.65e-18!41;UBERON:0006240!8.65e-18!41;UBERON:0000033!5.36e-17!123;UBERON:0000153!8.34e-17!129;UBERON:0007811!8.34e-17!129;UBERON:0002020!8.47e-16!34;UBERON:0003528!8.47e-16!34;UBERON:0001893!1.22e-15!34;UBERON:0002791!5.24e-15!33;UBERON:0001869!8.51e-15!32;UBERON:0004121!8.98e-15!169;UBERON:0000475!3.34e-14!365;UBERON:0000924!5.08e-14!173;UBERON:0006601!5.08e-14!173;UBERON:0000481!4.85e-13!347;UBERON:0000956!5.62e-11!25;UBERON:0000203!5.62e-11!25;UBERON:0002619!7.36e-11!22;UBERON:0000483!3.42e-10!309;UBERON:0001950!6.19e-10!20;UBERON:0000119!1.06e-09!312;UBERON:0000477!4.85e-08!286;UBERON:0000062!6.58e-08!511;UBERON:0000064!7.04e-08!219;UBERON:0004111!7.65e-07!241 | |ontology_enrichment_uberon=UBERON:0007023!1.48e-28!115;UBERON:0003075!1.76e-23!86;UBERON:0007284!1.76e-23!86;UBERON:0001049!1.77e-23!57;UBERON:0005068!1.77e-23!57;UBERON:0006241!1.77e-23!57;UBERON:0007135!1.77e-23!57;UBERON:0005743!3.13e-22!86;UBERON:0002346!9.41e-22!90;UBERON:0001017!1.54e-20!82;UBERON:0000073!1.73e-20!94;UBERON:0001016!1.73e-20!94;UBERON:0002616!3.49e-20!59;UBERON:0003056!1.61e-18!61;UBERON:0003080!2.69e-18!42;UBERON:0000955!3.14e-18!69;UBERON:0006238!3.14e-18!69;UBERON:0002780!8.65e-18!41;UBERON:0001890!8.65e-18!41;UBERON:0006240!8.65e-18!41;UBERON:0000033!5.36e-17!123;UBERON:0000153!8.34e-17!129;UBERON:0007811!8.34e-17!129;UBERON:0002020!8.47e-16!34;UBERON:0003528!8.47e-16!34;UBERON:0001893!1.22e-15!34;UBERON:0002791!5.24e-15!33;UBERON:0001869!8.51e-15!32;UBERON:0004121!8.98e-15!169;UBERON:0000475!3.34e-14!365;UBERON:0000924!5.08e-14!173;UBERON:0006601!5.08e-14!173;UBERON:0000481!4.85e-13!347;UBERON:0000956!5.62e-11!25;UBERON:0000203!5.62e-11!25;UBERON:0002619!7.36e-11!22;UBERON:0000483!3.42e-10!309;UBERON:0001950!6.19e-10!20;UBERON:0000119!1.06e-09!312;UBERON:0000477!4.85e-08!286;UBERON:0000062!6.58e-08!511;UBERON:0000064!7.04e-08!219;UBERON:0004111!7.65e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.36e-16;34!UBERON:0002020;3.36e-16;34!UBERON:0002780;3.98e-16;41!UBERON:0001890;3.98e-16;41!UBERON:0000073;5.11e-16;53!UBERON:0002616;5.11e-16;53!UBERON:0001893;6.32e-16;34!UBERON:0001869;1.39e-15;32!UBERON:0002791;2.17e-15;32!UBERON:0002619;1.67e-14;22!UBERON:0001950;4.21e-13;20!UBERON:0000956;3.84e-12;25!UBERON:0000203;3.84e-12;25!UBERON:0001017;5.83e-12;75!UBERON:0000955;1.69e-11;68!UBERON:0001016;5.78e-10;83!UBERON:0000125;3.12e-09;9!UBERON:0002308;3.12e-09;9!UBERON:0007023;1.01e-08;114!UBERON:0002298;2.63e-07;6!UBERON:0009663;2.94e-07;7!UBERON:0004732;5.16e-07;13!UBERON:0002021;5.34e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.75e-31,56;UBERON:0005068,4.75e-31,56;UBERON:0006241,4.75e-31,56;UBERON:0007135,4.75e-31,56;UBERON:0007023,1.20e-29,114;UBERON:0000073,2.60e-28,53;UBERON:0002616,2.60e-28,53;UBERON:0003075,4.34e-28,82;UBERON:0007284,4.34e-28,82;UBERON:0002346,5.90e-26,86;UBERON:0001017,1.44e-24,81;UBERON:0000955,1.25e-23,68;UBERON:0006238,1.25e-23,68;UBERON:0002780,5.34e-23,41;UBERON:0001890,5.34e-23,41;UBERON:0003080,5.34e-23,41;UBERON:0006240,5.34e-23,41;UBERON:0010371,2.11e-22,104;UBERON:0001016,2.33e-22,89;UBERON:0003056,3.58e-22,61;UBERON:0011216,3.76e-20,223;UBERON:0003528,1.90e-19,34;UBERON:0002020,1.90e-19,34;UBERON:0001893,3.18e-19,34;UBERON:0001869,6.44e-18,32;UBERON:0002791,1.39e-17,32;UBERON:0010314,1.78e-17,132;UBERON:0002619,1.41e-14,22;UBERON:0001950,3.90e-13,20;UBERON:0004121,2.41e-12,171;UBERON:0000924,2.41e-12,171;UBERON:0006601,2.41e-12,171;UBERON:0000956,3.32e-12,25;UBERON:0000203,3.32e-12,25;UBERON:0000125,3.01e-09,9;UBERON:0002308,3.01e-09,9;UBERON:0003076,3.89e-09,15;UBERON:0003057,3.89e-09,15;UBERON:0002298,1.85e-07,6;UBERON:0009663,2.90e-07,7;UBERON:0004732,3.89e-07,13;UBERON:0002021,4.89e-07,5;UBERON:0000483,6.24e-07,306;UBERON:0000025,7.83e-07,192;UBERON:0000200,8.05e-07,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0.893922188854576,0,0,0.631719873426831,0.261185628199839,0.982935746006035,0,0,0,1.36142988256051,1.32558950291166,0,0,0,0,0,0.204000691244253,0,0.85870796139317,0.136874425072884,0.251085279189606,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0.361439152384566,0.50133791063589,0.869079113764942,0,0,0.567208902984407,1.55210578223795,1.93236528524877,2.75056058545197,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,1.72101972449288,0,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0,0,0.234321431833797,1.5608003841516,0,0.896692083310806,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0.206651562351531,0,0,0,0,0.505008341862199,0.125118519871964,0,0.438977620880838,0,0,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0.292311015483596,0,0,0,0,0,0,0,0,0.573609190778008,0,0.132529768321485,0.464775771478074,0.829288440122964,0.756962552626885,0,1.56449532329816,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,1.31700342490351,0,0,0,0,0,1.44331342025273,0.115930404975077,5.9878434060269,0.144366447761074,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0.626909658919938,0,0,0,0,0,0.288239906833923,0,1.07946420296687,2.67391897890794,4.68869788840188,0,1.64523988325318,0,3.71574362419752,0,0,0,2.06834745212444,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,8.13886318060882,1.74306691720059,1.19967589418468,0,0,0,0.239624855491583,0,0,1.15825045334063,0.205476322550383,1.25342674267927,0,0,0,0,11.1801634657884,2.60279707715243,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,3.18997878469764,2.00068208423871,0,0,0,0,0,4.8151375956435,0,1.03473071292505,0,0.553107505625109,0.955719759148911,0,0,0,0,0,0,0,0,0,0.767309866440312,0.280660094433074,0.384417447767103,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0.328508624055237,0,0.116210378459959,0,0.601519410909855,0,1.83703117063371,0,0.917870904715969,0,0.308061348417659,0,0,0.316654886678627,0,0,0.863663664408557,0,0,0,0,0,0.671624264166535,0,0,0.769350375349168,1.96808787419823,1.62689197332152,0.824328093181778,0.640986253728404,0.660075999364704,0,0,0,0.096670718292122,0,0.307007349452259,0,0,0,0.170453254832202,0.267096106940212,0.330569830721956,0,0.255225424989168,0,0,0,0,0,0,0,0.55597265731176,0.572499546967965,0,0.949138274156178,1.71567174531442,0.767693373934002,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.589062011728432,0.202182481573316,0,0.842516912477962,0,0,0,0,0.565621727814851,0,0,0,0,0,3.27947376023316,0,0,0,0,0,0,1.06428319221179,0.422215270595328,0.329294892959902,0.379473173765715,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,0.984685914873589,0,0,0,4.18420775327246,0.276283915531148,0,0.20453736500431,1.10776324914963,0.933118762985422,3.77447074818773,0.895105873378046,0,9.76569715805643,0,0,1.93866549219044,3.9890282209596,5.98841394003583,0.520855522170466,0,2.17499872630438,0.1137934482855,2.03402920234213,1.65471377237555,5.8606373451049,7.87332456134787,0.173624994933292,2.65722415744152,1.5677537021303,1.52581736317083,1.76926815889959,2.65992857058193,1.09692698576986,0,0.697118721393016,3.23191085715948,0.341826167541004,0,0,0.217294743844016,0,0,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0,3.60532092175952,3.97341447450947,0.210998064528027,0,0,0,0,4.68825091867698,1.83309043480088,0,0,0,1.81983059047828,0.802577647298789,5.62234669740814,0,0.978323094660449,0,0.394584402849391,0,0.30607276163049,0.568679216656392,3.75808548536231,4.76965680427337,0,0,0,0,1.42304773014896,0,3.12407529003236,0,0,0.34945333648406,0,0,0,0,5.81934098930517,0,4.74559555639118,0,0,4.81162049264678,0.586654148204409,1.04206466326994,1.92107695265417,0,0,39.6296622734068,0,0,0,0,0,0,0,0,4.80336230967832,3.01191833562385,0,1.71906176567983,0,0.837847203816763,0,0,1.79711100449092,0.429226048136571,0.223171457441873,0.201550417460179,0,0,0,0,0,2.75596948241297,0,1.59045937961861,2.72406812223151,0,0,0,0,0,3.28047605953333,0.335434687599266,0.315222829196793,0.681909645754975,1.16160370171347,5.1993328406525,0,0.714695326373367,0,0,2.71499800876856,1.72844298240254,3.5924609612035,7.18381149374925,0,0,0,0.293104467356165,0,4.78346938537737,3.30581504356725,1.36869470307464,0,4.69864615297857,13.5195702385713,6.62782488555513,0.496166021811951,0,0,0,0,0,0.306345576763462,1.63936315354902,6.75332613876007,1.77213635993397,3.29470915235301,3.8809188519015,6.88091034828085,2.88415533995816,2.98062734118641,0,0.499921631848426,0,0.85639600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| ||
|short_description=p1@SEMA3E | |short_description=p1@SEMA3E | ||
}} | }} |
Latest revision as of 19:33, 19 September 2015
Short description: | p1@SEMA3E |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEMA3E_5end |
Coexpression cluster: | C1540_gastric_pharyngeal_mucinous_smallcell_transitionalcell_rhabdomyosarcoma_somatostatinoma |
Association with transcript: | 0bp_to_ENST00000541514, NM_012431_5end |
EntrezGene: | SEMA3E |
HGNC: | 10727 |
UniProt: | F5H6U0O15041 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data