FFCP PHASE1:Hg19::chrX:38211777..38211791,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5009 | |EntrezGene=5009 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8512 | |HGNC=8512 | ||
|TSSclassifier=strong | |||
|UniProt=P00480 | |UniProt=P00480 | ||
|association_with_transcript=-6bp_to_ENST00000039007_5end | |association_with_transcript=-6bp_to_ENST00000039007_5end | ||
|cluster_id=chrX:38211777..38211791,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_2_at_OTC_5end | |description=CAGE_peak_2_at_OTC_5end | ||
|id=chrX:38211777..38211791,+ | |id=chrX:38211777..38211791,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.77e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.61e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.41e-14;1!UBERON:0004161;1.86e-11;11!UBERON:0009497;8.79e-10;13!UBERON:0006965;8.04e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-19!115;UBERON:0001007!9.24e-11!155;UBERON:0001555!9.24e-11!155;UBERON:0007026!9.24e-11!155;UBERON:0004921!5.21e-10!129;UBERON:0004185!5.21e-10!129;UBERON:0003127!5.83e-10!2;UBERON:0004119!1.87e-09!169;UBERON:0000925!1.87e-09!169;UBERON:0006595!1.87e-09!169;UBERON:0002368!1.33e-07!35;UBERON:0009854!3.30e-07!23;UBERON:0005911!3.99e-07!82;UBERON:0003929!4.60e-07!54 | |ontology_enrichment_uberon=UBERON:0007023!1.14e-19!115;UBERON:0001007!9.24e-11!155;UBERON:0001555!9.24e-11!155;UBERON:0007026!9.24e-11!155;UBERON:0004921!5.21e-10!129;UBERON:0004185!5.21e-10!129;UBERON:0003127!5.83e-10!2;UBERON:0004119!1.87e-09!169;UBERON:0000925!1.87e-09!169;UBERON:0006595!1.87e-09!169;UBERON:0002368!1.33e-07!35;UBERON:0009854!3.30e-07!23;UBERON:0005911!3.99e-07!82;UBERON:0003929!4.60e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.94e-24;4!UBERON:0002423;5.99e-19;25!UBERON:0002107;1.13e-17;19!UBERON:0006925;1.13e-17;19!UBERON:0000029;2.41e-14;1!UBERON:0000160;5.13e-12;17!UBERON:0002365;8.10e-11;31!UBERON:0002330;8.10e-11;31!UBERON:0005409;1.85e-09;22!UBERON:0002368;2.13e-09;33!UBERON:0001007;4.50e-08;81!UBERON:0000949;6.33e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.10e-24,4;UBERON:0009497,6.00e-19,25;UBERON:0000015,6.00e-19,25;UBERON:0002423,6.00e-19,25;UBERON:0006235,6.00e-19,25;UBERON:0004161,6.00e-19,25;UBERON:0002107,1.09e-17,19;UBERON:0006925,1.09e-17,19;UBERON:0008836,1.09e-17,19;UBERON:0008835,2.80e-15,22;UBERON:0003894,2.80e-15,22;UBERON:0009854,1.29e-14,23;UBERON:0000029,1.84e-14,1;UBERON:0007499,1.91e-13,25;UBERON:0009856,6.29e-13,26;UBERON:0000160,5.13e-12,17;UBERON:0002365,7.74e-11,31;UBERON:0002330,7.74e-11,31;UBERON:0002368,1.36e-09,35;UBERON:0003929,1.29e-08,54;UBERON:0005172,1.29e-08,54;UBERON:0005173,1.29e-08,54;UBERON:0005409,2.15e-08,25;UBERON:0004921,4.15e-08,118;UBERON:0001007,5.80e-08,145;UBERON:0001555,5.80e-08,145;UBERON:0007026,5.80e-08,145;UBERON:0002417,1.02e-07,60;UBERON:0000916,1.02e-07,60;UBERON:0000949,1.93e-07,45;UBERON:0004119,4.17e-07,160;UBERON:0000925,4.17e-07,160;UBERON:0006595,4.17e-07,160 | |||
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|short_description=p2@OTC | |short_description=p2@OTC | ||
}} | }} |
Latest revision as of 00:00, 25 September 2015
Short description: | p2@OTC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OTC_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -6bp_to_ENST00000039007_5end |
EntrezGene: | OTC |
HGNC: | 8512 |
UniProt: | P00480 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.61e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.10e-24 | 4 |
epithelium of foregut-midgut junction | 6.00e-19 | 25 |
anatomical boundary | 6.00e-19 | 25 |
hepatobiliary system | 6.00e-19 | 25 |
foregut-midgut junction | 6.00e-19 | 25 |
septum transversum | 6.00e-19 | 25 |
liver | 1.09e-17 | 19 |
digestive gland | 1.09e-17 | 19 |
liver bud | 1.09e-17 | 19 |
hepatic diverticulum | 2.80e-15 | 22 |
liver primordium | 2.80e-15 | 22 |
digestive tract diverticulum | 1.29e-14 | 23 |
lymph node | 1.84e-14 | 1 |
epithelial sac | 1.91e-13 | 25 |
sac | 6.29e-13 | 26 |
intestine | 5.13e-12 | 17 |
exocrine gland | 7.74e-11 | 31 |
exocrine system | 7.74e-11 | 31 |
endocrine gland | 1.36e-09 | 35 |
gut epithelium | 1.29e-08 | 54 |
abdomen element | 1.29e-08 | 54 |
abdominal segment element | 1.29e-08 | 54 |
gastrointestinal system | 2.15e-08 | 25 |
subdivision of digestive tract | 4.15e-08 | 118 |
digestive system | 5.80e-08 | 145 |
digestive tract | 5.80e-08 | 145 |
primitive gut | 5.80e-08 | 145 |
abdominal segment of trunk | 1.02e-07 | 60 |
abdomen | 1.02e-07 | 60 |
endocrine system | 1.93e-07 | 45 |
endoderm-derived structure | 4.17e-07 | 160 |
endoderm | 4.17e-07 | 160 |
presumptive endoderm | 4.17e-07 | 160 |