CL:0002393: Difference between revisions
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|id=CL:0002393 | |id=CL:0002393 | ||
|name=intermediate monocyte | |name=intermediate monocyte | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="A monocyte that has characteristics of both patrolling and inflammatory monocytes." [GOC:tfm, PMID:20628149, PMID:20870168] | |def="A monocyte that has characteristics of both patrolling and inflammatory monocytes." [GOC:tfm, PMID:20628149, PMID:20870168] | ||
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|obo_creation_date=2010-10-04T10:52:03Z | |obo_creation_date=2010-10-04T10:52:03Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Latest revision as of 17:27, 26 June 2012
| Name: | intermediate monocyte |
|---|---|
| Namespace: | cell;;efo |
| Definition: | "A monocyte that has characteristics of both patrolling and inflammatory monocytes." [GOC:tfm, PMID:20628149, PMID:20870168] |
| Created by: | tmeehan |
| Creation date: | 2010-10-04T10:52:03Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000576(monocyte) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11224-116B9 (CD14+ Monocytes, donor1)
- 11305-117B9 (CD14+ Monocytes, donor2)
- 11381-118B4 (CD14+ Monocytes, donor3)
- 11789-124B7 (CD14+CD16+ Monocytes, donor1)
- 11801-124D1 (CD14+CD16+ Monocytes, donor2)
- 11912-125G4 (CD14+CD16+ Monocytes, donor3)
- 12149-128F7
- 12172-128I3
- 12187-129A9
- 12192-129B5
... further results Mouse (Mus musculus)
- 11224-116B9 (CD14+ Monocytes, donor1)
- 11305-117B9 (CD14+ Monocytes, donor2)
- 11381-118B4 (CD14+ Monocytes, donor3)
- 11789-124B7 (CD14+CD16+ Monocytes, donor1)
- 11801-124D1 (CD14+CD16+ Monocytes, donor2)
- 11912-125G4 (CD14+CD16+ Monocytes, donor3)
- 12149-128F7
- 12172-128I3
- 12187-129A9
- 12192-129B5
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002393 (intermediate monocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.97e-155 | FFCP PHASE1:Hg19::chr1:42230480..42230491,+#_e4f953771c42a6d18a57241c10a0cd9d | p@chr1:42230480..42230491, + |
| 9.97e-155 | FFCP PHASE2:Hg19::chr1:42230480..42230491,+#_e4f953771c42a6d18a57241c10a0cd9d | p@chr1:42230480..42230491, + |
| 1.49e-154 | FFCP PHASE1:Hg19::chr10:115080077..115080087,-#_d837100eb9c3630795399393a8d05e82 | p@chr10:115080077..115080087, - |
| 1.49e-154 | FFCP PHASE2:Hg19::chr10:115080077..115080087,-#_d837100eb9c3630795399393a8d05e82 | p@chr10:115080077..115080087, - |
| 3.26e-139 | FFCP PHASE1:Hg19::chr7:2797828..2797848,-#_ba2ab176fdcc38007fb9bd6042d74ca5 | p@chr7:2797828..2797848, - |
| 3.26e-139 | FFCP PHASE2:Hg19::chr7:2797828..2797848,-#_ba2ab176fdcc38007fb9bd6042d74ca5 | p@chr7:2797828..2797848, - |
| 1.42e-130 | FFCP PHASE1:Hg19::chr10:115070193..115070207,-#_33de9be0258decb8b584aa658c84ed6d | p@chr10:115070193..115070207, - |
| 1.42e-130 | FFCP PHASE2:Hg19::chr10:115070193..115070207,-#_33de9be0258decb8b584aa658c84ed6d | p@chr10:115070193..115070207, - |
| 1.42e-130 | FFCP PHASE2:Hg19::chr1:161519682..161519691,-#_33de9be0258decb8b584aa658c84ed6d | p7@FCGR3A |
| 1.42e-130 | FFCP PHASE1:Hg19::chr1:161519682..161519691,-#_33de9be0258decb8b584aa658c84ed6d | p7@FCGR3A |
| 3.02e-112 | FFCP PHASE1:Hg19::chr15:75080883..75080890,+#_a12ae3f3d73a54aa9815e191395cf709 | p14@CSK |
| 3.02e-112 | FFCP PHASE2:Hg19::chr15:75080883..75080890,+#_a12ae3f3d73a54aa9815e191395cf709 | p14@CSK |
| 3.02e-112 | FFCP PHASE2:Hg19::chr17:47287786..47287800,-#_a12ae3f3d73a54aa9815e191395cf709 | p@chr17:47287786..47287800, - |
| 3.02e-112 | FFCP PHASE1:Hg19::chr17:47287786..47287800,-#_a12ae3f3d73a54aa9815e191395cf709 | p@chr17:47287786..47287800, - |
| 4.43e-112 | FFCP PHASE2:Hg19::chr7:20581377..20581387,-#_97cb68ac4d6baefddac95813a6ee5ee9 | p@chr7:20581377..20581387, - |
| 4.43e-112 | FFCP PHASE1:Hg19::chr7:20581377..20581387,-#_97cb68ac4d6baefddac95813a6ee5ee9 | p@chr7:20581377..20581387, - |
| 4.43e-112 | FFCP PHASE1:Hg19::chr3:188118437..188118443,+#_97cb68ac4d6baefddac95813a6ee5ee9 | p@chr3:188118437..188118443, + |
| 4.43e-112 | FFCP PHASE1:Hg19::chr4:2794535..2794549,-#_97cb68ac4d6baefddac95813a6ee5ee9 | p@chr4:2794535..2794549, - |
| 4.43e-112 | FFCP PHASE2:Hg19::chr4:2794535..2794549,-#_97cb68ac4d6baefddac95813a6ee5ee9 | p@chr4:2794535..2794549, - |
| 4.43e-112 | FFCP PHASE2:Hg19::chr3:188118437..188118443,+#_97cb68ac4d6baefddac95813a6ee5ee9 | p@chr3:188118437..188118443, + |
| 4.6e-109 | FFCP PHASE2:Hg19::chr15:22538560..22538601,-#_1c2d549c61f89ba93f5ac9a8f9137685 | p@chr15:22538560..22538601, - |
| 4.6e-109 | FFCP PHASE1:Hg19::chr15:22538560..22538601,-#_1c2d549c61f89ba93f5ac9a8f9137685 | p@chr15:22538560..22538601, - |
| 4.6e-109 | FFCP PHASE1:Hg19::chr10:43609342..43609351,+#_1c2d549c61f89ba93f5ac9a8f9137685 | p@chr10:43609342..43609351, + |
| 4.6e-109 | FFCP PHASE2:Hg19::chr11:109964597..109964601,-#_1c2d549c61f89ba93f5ac9a8f9137685 | p@chr11:109964597..109964601, - |
| 4.6e-109 | FFCP PHASE1:Hg19::chr11:109964597..109964601,-#_1c2d549c61f89ba93f5ac9a8f9137685 | p@chr11:109964597..109964601, - |
| 4.6e-109 | FFCP PHASE2:Hg19::chr10:43609342..43609351,+#_1c2d549c61f89ba93f5ac9a8f9137685 | p@chr10:43609342..43609351, + |
| 2.5e-107 | FFCP PHASE2:Hg19::chr8:11716298..11716315,-#_f76d083a9e35c82766cf0d82f48f4914 | p@chr8:11716298..11716315, - |
| 2.5e-107 | FFCP PHASE1:Hg19::chr8:11716298..11716315,-#_f76d083a9e35c82766cf0d82f48f4914 | p@chr8:11716298..11716315, - |
| 2.26e-103 | FFCP PHASE1:Hg19::chr2:16845595..16845603,-#_b35ad6c941404e600e9ab285ad007dce | p@chr2:16845595..16845603, - |
| 2.26e-103 | FFCP PHASE2:Hg19::chr2:16845595..16845603,-#_b35ad6c941404e600e9ab285ad007dce | p@chr2:16845595..16845603, - |
| 7.39e-99 | FFCP PHASE1:Hg19::chr11:60722191..60722202,+#_e0370e4da9983cfb17489cf0d1b3d6d3 | p@chr11:60722191..60722202, + |
| 7.39e-99 | FFCP PHASE2:Hg19::chr11:60722191..60722202,+#_e0370e4da9983cfb17489cf0d1b3d6d3 | p@chr11:60722191..60722202, + |
| 7.69e-99 | FFCP PHASE2:Hg19::chr9:136709727..136709738,+#_2a2a2b3712f43ee38bbf8a2f9a793a1e | p@chr9:136709727..136709738, + |
| 7.69e-99 | FFCP PHASE1:Hg19::chr9:136709727..136709738,+#_2a2a2b3712f43ee38bbf8a2f9a793a1e | p@chr9:136709727..136709738, + |
| 2.01e-98 | FFCP PHASE2:Hg19::chr9:137267629..137267639,-#_be52fed8bb0de7830d021ff0c397055d | p@chr9:137267629..137267639, - |
| 2.01e-98 | FFCP PHASE1:Hg19::chr9:137267629..137267639,-#_be52fed8bb0de7830d021ff0c397055d | p@chr9:137267629..137267639, - |
| 2.82e-98 | FFCP PHASE2:Hg19::chr6:31584663..31584673,-#_66de12a24140a3c6f97fb82e04f727a1 | p@chr6:31584663..31584673, - |
| 2.82e-98 | FFCP PHASE1:Hg19::chr6:31584663..31584673,-#_66de12a24140a3c6f97fb82e04f727a1 | p@chr6:31584663..31584673, - |
| 5.98e-94 | FFCP PHASE1:Hg19::chr17:81148156..81148167,-#_f2c668b5c0ec0596de31589aed8b993a | p@chr17:81148156..81148167, - |
| 5.98e-94 | FFCP PHASE2:Hg19::chr17:81148156..81148167,-#_f2c668b5c0ec0596de31589aed8b993a | p@chr17:81148156..81148167, - |
| 5.85e-93 | FFCP PHASE1:Hg19::chr2:208368220..208368233,+#_5c946a7efaf8c040e64dc82da136c68d | p@chr2:208368220..208368233, + |
| 5.85e-93 | FFCP PHASE2:Hg19::chr2:208368220..208368233,+#_5c946a7efaf8c040e64dc82da136c68d | p@chr2:208368220..208368233, + |
| 4.91e-91 | FFCP PHASE2:Hg19::chr17:40351201..40351230,+#_b12006a4abb9c27bba19d0704b776e8f | p@chr17:40351201..40351230, + |
| 4.91e-91 | FFCP PHASE1:Hg19::chr17:40351201..40351230,+#_b12006a4abb9c27bba19d0704b776e8f | p@chr17:40351201..40351230, + |
| 5.21e-88 | FFCP PHASE1:Hg19::chr3:101592712..101592731,+#_31f9715242347d29ff9e500370076d02 | p@chr3:101592712..101592731, + |
| 5.21e-88 | FFCP PHASE2:Hg19::chr3:101592712..101592731,+#_31f9715242347d29ff9e500370076d02 | p@chr3:101592712..101592731, + |
| 8.49e-88 | FFCP PHASE1:Hg19::chr19:50285177..50285181,+#_fe6244e696ffa4136c689e38d9a3145d | p@chr19:50285177..50285181, + |
| 8.49e-88 | FFCP PHASE2:Hg19::chr19:50285177..50285181,+#_fe6244e696ffa4136c689e38d9a3145d | p@chr19:50285177..50285181, + |
| 9.86e-88 | FFCP PHASE1:Hg19::chr7:2673688..2673709,-#_f0abad93d4928d4f7297670a61299c29 | p@chr7:2673688..2673709, - |
| 9.86e-88 | FFCP PHASE2:Hg19::chr7:2673688..2673709,-#_f0abad93d4928d4f7297670a61299c29 | p@chr7:2673688..2673709, - |
| 1.37e-87 | FFCP PHASE2:Hg19::chr8:144480343..144480350,-#_4f6aac4d2f51b36b8ac01be93d5cdffe | p@chr8:144480343..144480350, - |
| 1.37e-87 | FFCP PHASE1:Hg19::chr8:144480343..144480350,-#_4f6aac4d2f51b36b8ac01be93d5cdffe | p@chr8:144480343..144480350, - |
| 2.08e-87 | FFCP PHASE2:Hg19::chr6:144952186..144952227,+#_7e629841cf69d6036162fa9c248b4efc | p@chr6:144952186..144952227, + |
| 2.08e-87 | FFCP PHASE1:Hg19::chr6:144952186..144952227,+#_7e629841cf69d6036162fa9c248b4efc | p@chr6:144952186..144952227, + |
| 5.09e-87 | FFCP PHASE2:Hg19::chr12:133065759..133065769,-#_3c2e0184d71c5d5d70de1c322629e1d9 | p@chr12:133065759..133065769, - |
| 5.09e-87 | FFCP PHASE1:Hg19::chr12:133065759..133065769,-#_3c2e0184d71c5d5d70de1c322629e1d9 | p@chr12:133065759..133065769, - |
| 1.01e-83 | FFCP PHASE2:Hg19::chr5:1503650..1503661,-#_066926649b552f8099981f1491ceb259 | p@chr5:1503650..1503661, - |
| 1.01e-83 | FFCP PHASE1:Hg19::chr5:1503650..1503661,-#_066926649b552f8099981f1491ceb259 | p@chr5:1503650..1503661, - |
| 3.51e-83 | FFCP PHASE1:Hg19::chr3:101592758..101592794,+#_21b3b528f6ed2b4c0f71cf9378d2e377 | p@chr3:101592758..101592794, + |
| 3.51e-83 | FFCP PHASE2:Hg19::chr3:101592758..101592794,+#_21b3b528f6ed2b4c0f71cf9378d2e377 | p@chr3:101592758..101592794, + |
| 8.72e-83 | FFCP PHASE2:Hg19::chr7:2673037..2673047,-#_be2ea30ecdaf07193c55f7d91dbd8ac0 | p@chr7:2673037..2673047, - |
| 8.72e-83 | FFCP PHASE1:Hg19::chr7:2673037..2673047,-#_be2ea30ecdaf07193c55f7d91dbd8ac0 | p@chr7:2673037..2673047, - |
| 2.39e-82 | FFCP PHASE2:Hg19::chr3:101618082..101618090,+#_cd6b643bd75f36017fb98cf593c9c5d0 | p@chr3:101618082..101618090, + |
| 2.39e-82 | FFCP PHASE1:Hg19::chr3:101618082..101618090,+#_cd6b643bd75f36017fb98cf593c9c5d0 | p@chr3:101618082..101618090, + |
| 2.79e-82 | FFCP PHASE2:Hg19::chr9:27701766..27701787,-#_d234d69f9462a5b4608f48c9955db305 | p@chr9:27701766..27701787, - |
| 2.79e-82 | FFCP PHASE1:Hg19::chr9:27701766..27701787,-#_d234d69f9462a5b4608f48c9955db305 | p@chr9:27701766..27701787, - |
| 3.43e-82 | FFCP PHASE1:Hg19::chr7:77429034..77429040,-#_778ac96fa70f83f12862d78cce706d50 | p@chr7:77429034..77429040, - |
| 3.43e-82 | FFCP PHASE2:Hg19::chr7:77429034..77429040,-#_778ac96fa70f83f12862d78cce706d50 | p@chr7:77429034..77429040, - |
| 3.45e-82 | FFCP PHASE2:Hg19::chr1:151917057..151917078,-#_b547246ee6e204c9b881341293491f16 | p@chr1:151917057..151917078, - |
| 3.45e-82 | FFCP PHASE1:Hg19::chr1:151917057..151917078,-#_b547246ee6e204c9b881341293491f16 | p@chr1:151917057..151917078, - |
| 6.03e-80 | FFCP PHASE2:Hg19::chr10:115082678..115082691,-#_1e920218389ea3b3af9b1a2a1b0f9958 | p@chr10:115082678..115082691, - |
| 6.03e-80 | FFCP PHASE1:Hg19::chr10:115082678..115082691,-#_1e920218389ea3b3af9b1a2a1b0f9958 | p@chr10:115082678..115082691, - |
| 3.09e-79 | FFCP PHASE1:Hg19::chr6:144980558..144980569,+#_d4b2cf9dcf76e48ff3bdd758f86445f6 | p30@UTRN |
| 3.09e-79 | FFCP PHASE2:Hg19::chr3:50658125..50658131,+#_d4b2cf9dcf76e48ff3bdd758f86445f6 | p@chr3:50658125..50658131, + |
| 3.09e-79 | FFCP PHASE1:Hg19::chr3:50658125..50658131,+#_d4b2cf9dcf76e48ff3bdd758f86445f6 | p@chr3:50658125..50658131, + |
| 3.09e-79 | FFCP PHASE2:Hg19::chr6:144980558..144980569,+#_d4b2cf9dcf76e48ff3bdd758f86445f6 | p30@UTRN |
| 3.53e-79 | FFCP PHASE2:Hg19::chr16:1538881..1538887,+#_a3a73acf0ed5de255f57e6071839410b | p@chr16:1538881..1538887, + |
| 3.53e-79 | FFCP PHASE1:Hg19::chr16:1538881..1538887,+#_a3a73acf0ed5de255f57e6071839410b | p@chr16:1538881..1538887, + |
| 6.06e-79 | FFCP PHASE1:Hg19::chr17:7034579..7034590,+#_1bb1e43589142688295028e2c2796d74 | p@chr17:7034579..7034590, + |
| 6.06e-79 | FFCP PHASE2:Hg19::chr17:7034579..7034590,+#_1bb1e43589142688295028e2c2796d74 | p@chr17:7034579..7034590, + |
| 1.36e-78 | FFCP PHASE2:Hg19::chr17:72776516..72776526,+#_0a3f31b892020d8542ba3247c5425329 | p@chr17:72776516..72776526, + |
| 1.36e-78 | FFCP PHASE1:Hg19::chr17:72776516..72776526,+#_0a3f31b892020d8542ba3247c5425329 | p@chr17:72776516..72776526, + |
| 2.03e-78 | FFCP PHASE1:Hg19::chr12:116971460..116971463,+#_d921a0fda156e00a5b0b8b0004358ae7 | p@chr12:116971460..116971463, + |
| 2.03e-78 | FFCP PHASE2:Hg19::chr12:116971460..116971463,+#_d921a0fda156e00a5b0b8b0004358ae7 | p@chr12:116971460..116971463, + |
| 3.18e-78 | FFCP PHASE2:Hg19::chr19:50283684..50283702,+#_029683746e24e25d06f1c7652ccfaf27 | p@chr19:50283684..50283702, + |
| 3.18e-78 | FFCP PHASE1:Hg19::chr19:50283684..50283702,+#_029683746e24e25d06f1c7652ccfaf27 | p@chr19:50283684..50283702, + |
| 3.75e-78 | FFCP PHASE1:Hg19::chr7:155055063..155055078,+#_1b467d25b9197df5b38cfe6ac51564bd | p@chr7:155055063..155055078, + |
| 3.75e-78 | FFCP PHASE2:Hg19::chr7:155055063..155055078,+#_1b467d25b9197df5b38cfe6ac51564bd | p@chr7:155055063..155055078, + |
| 4.4e-78 | FFCP PHASE2:Hg19::chr16:1538765..1538796,-#_7bc0b0781df3068f2114d523dfd3f76d | p1@PTX4 |
| 4.4e-78 | FFCP PHASE1:Hg19::chr16:1538765..1538796,-#_7bc0b0781df3068f2114d523dfd3f76d | p1@PTX4 |
| 1.01e-77 | FFCP PHASE2:Hg19::chr10:60026744..60026760,-#_a64d2a768f6d0ebff199541e1d8613a4 | p@chr10:60026744..60026760, - |
| 1.01e-77 | FFCP PHASE1:Hg19::chr10:60026744..60026760,-#_a64d2a768f6d0ebff199541e1d8613a4 | p@chr10:60026744..60026760, - |
| 1.37e-77 | FFCP PHASE2:Hg19::chr11:88071295..88071324,-#_7cf67a0d77b7342118ba8bf1bf54c84b | p5@CTSC |
| 1.37e-77 | FFCP PHASE1:Hg19::chr11:88071295..88071324,-#_7cf67a0d77b7342118ba8bf1bf54c84b | p5@CTSC |
| 2.67e-75 | FFCP PHASE1:Hg19::chr7:139529773..139529801,+#_2d921b5453712d649b1085fa08938fbb | p1@AK130708 |
| 2.67e-75 | FFCP PHASE2:Hg19::chr7:139529773..139529801,+#_2d921b5453712d649b1085fa08938fbb | p1@AK130708 |
| 7.66e-75 | FFCP PHASE1:Hg19::chr8:52811117..52811133,+#_c3f66d4c5bc49d062207ac12626ae8d7 | p@chr8:52811117..52811133, + |
| 7.66e-75 | FFCP PHASE2:Hg19::chr8:52811117..52811133,+#_c3f66d4c5bc49d062207ac12626ae8d7 | p@chr8:52811117..52811133, + |
| 1.39e-74 | FFCP PHASE2:Hg19::chr17:81039792..81039812,+#_9b293ef105c4b272e346b602477ecbf9 | p@chr17:81039792..81039812, + |
| 1.39e-74 | FFCP PHASE1:Hg19::chr17:81039792..81039812,+#_9b293ef105c4b272e346b602477ecbf9 | p@chr17:81039792..81039812, + |
