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{{UBERON
{{UBERON
|id=UBERON:0005171
|alt_id=
|name=hepatic duct
|namespace=
|def="The hepatic duct is the duct that leads from the liver to the bile duct[GO]. A duct that carries bile from the liver to the small intestine[ZFA]." [GO:0061011]
|xref=EHDAA2:0000741;;EHDAA:3049;;EMAPA:16843;;EMAPA:18672;;galen:HepaticDuct;;MA:0000357;;ncithesaurus:Hepatic_Duct;;OpenCyc:Mx4rvWo8WJwpEbGdrcN5Y29ycA;;SCTID:245399002;;TAO:0001100;;VHOG:0000219;;ZFA:0001100
|is_a=UBERON:0002394
|synonym=
|comment=TODO - MA distinguishes between bile duct, hepatic duct, common bile duct and common hepatic duct. in FMA hepatic duct and common hepatic duct are the same
|comment=TODO - MA distinguishes between bile duct, hepatic duct, common bile duct and common hepatic duct. in FMA hepatic duct and common hepatic duct are the same
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The hepatic duct is the duct that leads from the liver to the bile duct[GO]. A duct that carries bile from the liver to the small intestine[ZFA]." [GO:0061011]
|subset=vertebrate_core
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005171
|is_a=UBERON:0002394
|is_obsolete=
|located_in=
|located_in=
|name=hepatic duct
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001173
|part_of=UBERON:0001173
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "A duct that carries bile from the liver to the small intestine.[TAO]" xsd:string
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "A duct that carries bile from the liver to the small intestine.[TAO]" xsd:string
|is_obsolete=
|subset=vertebrate_core
|preceded_by=
|synonym=
|union_of=
|xref=EHDAA2:0000741;;EHDAA:3049;;EMAPA:16843;;EMAPA:18672;;galen:HepaticDuct;;MA:0000357;;ncithesaurus:Hepatic_Duct;;OpenCyc:Mx4rvWo8WJwpEbGdrcN5Y29ycA;;SCTID:245399002;;TAO:0001100;;VHOG:0000219;;ZFA:0001100
}}
}}

Latest revision as of 17:51, 12 September 2014

Name:hepatic duct
Namespace:FANTOM
Definition:"The hepatic duct is the duct that leads from the liver to the bile duct[GO]. A duct that carries bile from the liver to the small intestine[ZFA]." [GO:0061011]
Xrefs:
links:

EHDAA2:0000741
EHDAA:3049
EMAPA:16843
EMAPA:18672
galen:HepaticDuct
MA:0000357
ncithesaurus:Hepatic_Duct
OpenCyc:Mx4rvWo8WJwpEbGdrcN5Y29ycA
SCTID:245399002
TAO:0001100
VHOG:0000219

ZFA:0001100
Comments:TODO - MA distinguishes between bile duct, hepatic duct, common bile duct and common hepatic duct. in FMA hepatic duct and common hepatic duct are the same
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002394(bile duct)
part_of:UBERON:0001173(biliary tree)



Children

develops from:UBERON:0001280 (liver parenchyma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005171 (hepatic duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.74e-88FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_163eb2863c0778f62d6dc7c29d82ee3ap2@ENST00000448698
9.74e-88FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_163eb2863c0778f62d6dc7c29d82ee3ap2@ENST00000448698
3.07e-86FFCP PHASE2:Mm9::chr8:111108947..111108951,+#_4d0af0543b7169012267506dfa6a469bp@chr8:111108947..111108951, +
3.07e-86FFCP PHASE2:Mm9::chr13:5840965..5840966,+#_4d0af0543b7169012267506dfa6a469bp@chr13:5840965..5840966, +
3.07e-86FFCP PHASE1:Mm9::chr10:21389022..21389032,+#_4d0af0543b7169012267506dfa6a469bp@chr10:21389022..21389032, +
3.07e-86FFCP PHASE2:Mm9::chr13:113554186..113554192,+#_4d0af0543b7169012267506dfa6a469bp@chr13:113554186..113554192, +
3.07e-86FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_4d0af0543b7169012267506dfa6a469bp@chr17:12388232..12388237, +
3.07e-86FFCP PHASE1:Mm9::chr8:127816016..127816021,+#_4d0af0543b7169012267506dfa6a469bp@chr8:127816016..127816021, +
3.07e-86FFCP PHASE1:Mm9::chr10:85585949..85585969,-#_4d0af0543b7169012267506dfa6a469bp@chr10:85585949..85585969, -
3.07e-86FFCP PHASE1:Mm9::chr4:126939557..126939562,+#_4d0af0543b7169012267506dfa6a469bp@chr4:126939557..126939562, +
3.07e-86FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_4d0af0543b7169012267506dfa6a469bp@chr6:91441074..91441080, -
3.07e-86FFCP PHASE2:Mm9::chr17:34796428..34796430,-#_4d0af0543b7169012267506dfa6a469bp@chr17:34796428..34796430, -
3.07e-86FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_4d0af0543b7169012267506dfa6a469bp@chr3:121593688..121593695, +
3.07e-86FFCP PHASE2:Mm9::chr5:64344878..64344887,-#_4d0af0543b7169012267506dfa6a469bp@chr5:64344878..64344887, -
3.07e-86FFCP PHASE2:Mm9::chr11:107196799..107196814,+#_4d0af0543b7169012267506dfa6a469bp@chr11:107196799..107196814, +
3.07e-86FFCP PHASE2:Mm9::chr12:100752983..100752984,+#_4d0af0543b7169012267506dfa6a469bp@chr12:100752983..100752984, +
3.07e-86FFCP PHASE1:Mm9::chr12:100752983..100752984,+#_4d0af0543b7169012267506dfa6a469bp@chr12:100752983..100752984, +
3.07e-86FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_4d0af0543b7169012267506dfa6a469bp@chr6:51831254..51831256, -
3.07e-86FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_4d0af0543b7169012267506dfa6a469bp@chr3:104857794..104857802, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691530..86691535,-#_4d0af0543b7169012267506dfa6a469bp@chr12:86691530..86691535, -
3.07e-86FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_4d0af0543b7169012267506dfa6a469bp@chr11:48685851..48685860, -
3.07e-86FFCP PHASE2:Mm9::chr11:115280630..115280662,+#_4d0af0543b7169012267506dfa6a469bp@chr11:115280630..115280662, +
3.07e-86FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_4d0af0543b7169012267506dfa6a469bp@chr15:90508949..90508955, -
3.07e-86FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_4d0af0543b7169012267506dfa6a469bp@chr5:114422970..114422985, -
3.07e-86FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_4d0af0543b7169012267506dfa6a469bp@chr18:60398371..60398393, -
3.07e-86FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_4d0af0543b7169012267506dfa6a469bp@chr17:35093616..35093631, -
3.07e-86FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_4d0af0543b7169012267506dfa6a469bp@chr5:124112234..124112240, +
3.07e-86FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_4d0af0543b7169012267506dfa6a469bp@chr11:107196799..107196814, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093616..35093631,-#_4d0af0543b7169012267506dfa6a469bp@chr17:35093616..35093631, -
3.07e-86FFCP PHASE1:Mm9::chr7:87919399..87919406,+#_4d0af0543b7169012267506dfa6a469bp@chr7:87919399..87919406, +
3.07e-86FFCP PHASE1:Mm9::chr10:60279719..60279737,-#_4d0af0543b7169012267506dfa6a469bp@chr10:60279719..60279737, -
3.07e-86FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_4d0af0543b7169012267506dfa6a469bp@chr3:121593688..121593695, +
3.07e-86FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_4d0af0543b7169012267506dfa6a469bp@chr15:82207617..82207621, +
3.07e-86FFCP PHASE2:Mm9::chr7:52781901..52781904,+#_4d0af0543b7169012267506dfa6a469bp@chr7:52781901..52781904, +
3.07e-86FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_4d0af0543b7169012267506dfa6a469bp@chr18:39513150..39513152, +
3.07e-86FFCP PHASE2:Mm9::chr8:89310639..89310641,-#_4d0af0543b7169012267506dfa6a469bp@chr8:89310639..89310641, -
3.07e-86FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_4d0af0543b7169012267506dfa6a469bp@chr13:113550715..113550722, -
3.07e-86FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_4d0af0543b7169012267506dfa6a469bp@chr18:38831400..38831402, -
3.07e-86FFCP PHASE2:Mm9::chr13:113542610..113542614,+#_4d0af0543b7169012267506dfa6a469bp@chr13:113542610..113542614, +
3.07e-86FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_4d0af0543b7169012267506dfa6a469bp@chr4:137487112..137487117, +
3.07e-86FFCP PHASE2:Mm9::chr10:93819538..93819549,+#_4d0af0543b7169012267506dfa6a469bp@chr10:93819538..93819549, +
3.07e-86FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_4d0af0543b7169012267506dfa6a469bp@chr18:44793802..44793835, +
3.07e-86FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_4d0af0543b7169012267506dfa6a469bp@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr13:96429602..96429605,-#_4d0af0543b7169012267506dfa6a469bp@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr17:24807620..24807650,-#_4d0af0543b7169012267506dfa6a469bp@chr17:24807620..24807650, -
3.07e-86FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_4d0af0543b7169012267506dfa6a469bp@chr11:54785454..54785456, -
3.07e-86FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_4d0af0543b7169012267506dfa6a469bp@chr3:104857794..104857802, -
3.07e-86FFCP PHASE2:Mm9::chr14:8928284..8928331,+#_4d0af0543b7169012267506dfa6a469bp@chr14:8928284..8928331, +
3.07e-86FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_4d0af0543b7169012267506dfa6a469bp@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr15:59435855..59435878,-#_4d0af0543b7169012267506dfa6a469bp@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr12:81955014..81955018,+#_4d0af0543b7169012267506dfa6a469bp@chr12:81955014..81955018, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585991..85586025,-#_4d0af0543b7169012267506dfa6a469bp@chr10:85585991..85586025, -
3.07e-86FFCP PHASE2:Mm9::chr12:85288471..85288502,+#_4d0af0543b7169012267506dfa6a469bp@chr12:85288471..85288502, +
3.07e-86FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_4d0af0543b7169012267506dfa6a469bp@chr2:129407463..129407468, -
3.07e-86FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_4d0af0543b7169012267506dfa6a469bp@chr13:96429295..96429302, -
3.07e-86FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_4d0af0543b7169012267506dfa6a469bp@chr10:8471698..8471701, +
3.07e-86FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_4d0af0543b7169012267506dfa6a469bp@chr11:48685851..48685860, -
3.07e-86FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_4d0af0543b7169012267506dfa6a469bp@chr18:47491114..47491123, +
3.07e-86FFCP PHASE2:Mm9::chr16:30944451..30944485,+#_4d0af0543b7169012267506dfa6a469bp@chr16:30944451..30944485, +
3.07e-86FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_4d0af0543b7169012267506dfa6a469bp@chr10:93499468..93499494, -
3.07e-86FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_4d0af0543b7169012267506dfa6a469bp@chr15:82209805..82209851, +
3.07e-86FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_4d0af0543b7169012267506dfa6a469bp@chr1:132405466..132405470, +
3.07e-86FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_4d0af0543b7169012267506dfa6a469bp4@Gm4262
3.07e-86FFCP PHASE2:Mm9::chr4:57687477..57687488,+#_4d0af0543b7169012267506dfa6a469bp@chr4:57687477..57687488, +
3.07e-86FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_4d0af0543b7169012267506dfa6a469bp@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_4d0af0543b7169012267506dfa6a469bp@chr19:29573929..29573932, +
3.07e-86FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_4d0af0543b7169012267506dfa6a469bp@chr18:35900327..35900366, +
3.07e-86FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_4d0af0543b7169012267506dfa6a469bp@chr12:88237840..88237851, -
3.07e-86FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_4d0af0543b7169012267506dfa6a469bp@chr10:85585991..85586025, -
3.07e-86FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_4d0af0543b7169012267506dfa6a469bp@chr17:34796428..34796430, -
3.07e-86FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_4d0af0543b7169012267506dfa6a469bp@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_4d0af0543b7169012267506dfa6a469bp@chr16:91441786..91441787, -
3.07e-86FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_4d0af0543b7169012267506dfa6a469bp@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_4d0af0543b7169012267506dfa6a469bp@chr8:114123814..114123821, -
3.07e-86FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_4d0af0543b7169012267506dfa6a469bp@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_4d0af0543b7169012267506dfa6a469bp@chr4:126939557..126939562, +
3.07e-86FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_4d0af0543b7169012267506dfa6a469bp@chr4:62009160..62009164, -
3.07e-86FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_4d0af0543b7169012267506dfa6a469bp@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_4d0af0543b7169012267506dfa6a469bp@chr5:64344878..64344887, -
3.07e-86FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_4d0af0543b7169012267506dfa6a469bp@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_4d0af0543b7169012267506dfa6a469bp@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_4d0af0543b7169012267506dfa6a469bp@chr15:97402708..97402712, +
3.07e-86FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_4d0af0543b7169012267506dfa6a469bp@chr4:137487112..137487117, +
3.07e-86FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_4d0af0543b7169012267506dfa6a469bp@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_4d0af0543b7169012267506dfa6a469bp@chr11:115280630..115280662, +
3.07e-86FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_4d0af0543b7169012267506dfa6a469bp8@Il3ra
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_4d0af0543b7169012267506dfa6a469bp@chr12:86691575..86691580, -
3.07e-86FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_4d0af0543b7169012267506dfa6a469bp@chr11:54785454..54785456, -
3.07e-86FFCP PHASE2:Mm9::chr11:118287827..118287833,-#_4d0af0543b7169012267506dfa6a469bp@chr11:118287827..118287833, -
3.07e-86FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_4d0af0543b7169012267506dfa6a469bp@chr17:28107053..28107062, -
3.07e-86FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_4d0af0543b7169012267506dfa6a469bp@chr8:3311867..3311873, +
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_4d0af0543b7169012267506dfa6a469bp@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_4d0af0543b7169012267506dfa6a469bp@chr10:94580525..94580530, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_4d0af0543b7169012267506dfa6a469bp@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_4d0af0543b7169012267506dfa6a469bp@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_4d0af0543b7169012267506dfa6a469bp@chr5:32912678..32912687, +
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_4d0af0543b7169012267506dfa6a469bp@chr8:86713876..86713879, +
3.07e-86FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_4d0af0543b7169012267506dfa6a469bp@chr4:86335502..86335509, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_4d0af0543b7169012267506dfa6a469bp@chr17:35093764..35093773, -
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_4d0af0543b7169012267506dfa6a469bp@chr12:8400090..8400093, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "A duct that carries bile from the liver to the small intestine.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0005171&oldid=3277741"