FFCP PHASE1:Hg19::chr6:32158286..32158296,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5089 | |EntrezGene=5089 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8633 | |HGNC=8633 | ||
|TSSclassifier=strong | |||
|UniProt=P40425,Q7KZE5 | |UniProt=P40425,Q7KZE5 | ||
|association_with_transcript=-323bp_to_ENST00000375050,NM_002586,uc003oav.1,uc003oaw.2_5end | |association_with_transcript=-323bp_to_ENST00000375050,NM_002586,uc003oav.1,uc003oaw.2_5end | ||
|cluster_id=chr6:32158286..32158296,- | |||
|description=CAGE_peak_12_at_PBX2_5end | |description=CAGE_peak_12_at_PBX2_5end | ||
|id=chr6:32158286..32158296,- | |id=chr6:32158286..32158296,- | ||
|ontology_enrichment_celltype=CL:0002535;2.05e-15;2!CL:0002188;4.79e-07;5 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002535;2.05e-15;2!CL:0002188;4.79e-07;5 | ||
|ontology_enrichment_disease=DOID:4362;6.04e-07;5 | |ontology_enrichment_celltype_v019_2=CL:0002535,1.78e-15,2;CL:0002188,4.79e-07,5 | ||
|ontology_enrichment_uberon=UBERON:0007029;2.37e-29;1!UBERON:0006955;2.05e-15;2!UBERON:0004801;2.05e-15;2!UBERON:0000014;2.26e-08;4!UBERON:0000966;6.04e-07;5!UBERON:0005388;6.04e-07;5!UBERON:0001802;6.04e-07;5 | |ontology_enrichment_development_v019=UBERON:0003056;9.90e-11;3 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003056!6.52e-10!61;UBERON:0003075!2.09e-09!86;UBERON:0007284!2.09e-09!86;UBERON:0000073!4.76e-09!94;UBERON:0001016!4.76e-09!94;UBERON:0005743!1.16e-08!86;UBERON:0002346!1.42e-08!90;UBERON:0001049!1.67e-08!57;UBERON:0005068!1.67e-08!57;UBERON:0006241!1.67e-08!57;UBERON:0007135!1.67e-08!57;UBERON:0002020!4.94e-08!34;UBERON:0003528!4.94e-08!34;UBERON:0002616!5.49e-08!59;UBERON:0007023!7.46e-08!115;UBERON:0002780!9.50e-08!41;UBERON:0001890!9.50e-08!41;UBERON:0006240!9.50e-08!41;UBERON:0001869!1.08e-07!32;UBERON:0000153!1.76e-07!129;UBERON:0007811!1.76e-07!129;UBERON:0003080!1.92e-07!42;UBERON:0001017!3.56e-07!82;UBERON:0000033!3.77e-07!123;UBERON:0001893!5.37e-07!34;UBERON:0004121!5.45e-07!169;UBERON:0000955!6.65e-07!69;UBERON:0006238!6.65e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.37e-29;1!UBERON:0006955;2.05e-15;2!UBERON:0004801;2.05e-15;2!UBERON:0000014;2.26e-08;4!UBERON:0000966;6.04e-07;5!UBERON:0005388;6.04e-07;5!UBERON:0001802;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.33e-29,1;UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2;UBERON:0000014,1.96e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0,0,0.386521706326594,0,0,0.121973706129595,0,0.232387885739037,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.431255149719035,0,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.616122696835318,0,0,0,0,0,0,3.08454505380579,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0.320472213382419,0,0.490080431962063,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,2.53350489753592,0,0,1.76352923497993,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.230850775511391,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0.677942222341597,0,0,0.126621591911757,0.586654148204409,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0.275078873194468,0,0,0,0.182248669974074,0,0.315222829196793,1.52118305591495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.500763722825999,0,0.332787154610557,0.310482014706917,0,0,0,0,0.470531639396343,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0.862598491173454,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0,0,0,0,0,0.255524855279191,0.535701835878287,0,0,0.227662191351298,0,0,0,0.203909198930495,0.131545547125698,0.118193840883968,0,0,0.471346769748006,0,0.913158720509496,0,0,1.21510125100316,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0.22910686854405,0,0,0,0.098150233615243,0,0.647428837187895,0,0,1.94284397223656,0,1.39265542612958,0,0,0.219881033490858,0.150962843566674,0,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.160482733378337,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.20686599172379,0.213233981900981,0.476128862927481,0,0,0.112131862580613,0.12729431655633,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0,0,0.386521706326594,0,0,0.121973706129595,0,0.232387885739037,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.431255149719035,0,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.616122696835318,0,0,0,0,0,0,3.08454505380579,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0.320472213382419,0,0.490080431962063,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,2.53350489753592,0,0,1.76352923497993,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.230850775511391,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0.677942222341597,0,0,0.126621591911757,0.586654148204409,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0.275078873194468,0,0,0,0.182248669974074,0,0.315222829196793,1.52118305591495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.500763722825999,0,0.332787154610557,0.310482014706917,0,0,0,0,0.470531639396343,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0.862598491173454,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0,0,0,0,0,0.255524855279191,0.535701835878287,0,0,0.227662191351298,0,0,0,0.203909198930495,0.131545547125698,0.118193840883968,0,0,0.471346769748006,0,0.913158720509496,0,0,1.21510125100316,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0.22910686854405,0,0,0,0.098150233615243,0,0.647428837187895,0,0,1.94284397223656,0,1.39265542612958,0,0,0.219881033490858,0.150962843566674,0,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.160482733378337,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.20686599172379,0.213233981900981,0.476128862927481,0,0,0.112131862580613,0.12729431655633,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p12@PBX2 | |short_description=p12@PBX2 | ||
}} | }} |
Latest revision as of 02:16, 18 September 2015
Short description: | p12@PBX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PBX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -323bp_to_ENST00000375050, NM_002586, uc003oav.1, uc003oaw.2_5end |
EntrezGene: | PBX2 |
HGNC: | 8633 |
UniProt: | P40425Q7KZE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.78e-15 | 2 |
glomerular endothelial cell | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
surface | 1.33e-29 | 1 |
uterine epithelium | 1.78e-15 | 2 |
cervix epithelium | 1.78e-15 | 2 |
zone of skin | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.70e-07 | 5 |