FFCP PHASE1:Hg19::chr1:110453636..110453648,+: Difference between revisions
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|id=chr1:110453636..110453648,+
|short_description=p12@CSF1
|description=CAGE_peak_12_at_CSF1_5end
|association_with_transcript=28bp_to_ENST00000369801_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1435 | |EntrezGene=1435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2432 | |HGNC=2432 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000369801_5end | |||
|cluster_id=chr1:110453636..110453648,+ | |||
|coexpression_cluster_id=C1397 | |||
|description=CAGE_peak_12_at_CSF1_5end | |||
|id=chr1:110453636..110453648,+ | |||
|ontology_enrichment_celltype=CL:0002274!7.66e-10!5;CL:0000457!7.66e-10!5;CL:0002191!7.66e-10!5;CL:0000097!7.66e-10!5;CL:0000831!7.66e-10!5;CL:0002028!7.66e-10!5;CL:0000775!9.77e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.66e-70;5!CL:0000163;1.71e-39;9!CL:0002262;3.06e-12;2!CL:1000398;3.06e-12;2!CL:0000151;2.14e-09;36!CL:0000775;1.08e-08;3!CL:0002579;1.35e-08;3!CL:0000766;5.76e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.81e-70,5;CL:0002028,1.81e-70,5;CL:0000163,1.80e-39,9;CL:0002262,2.59e-12,2;CL:1000398,2.59e-12,2;CL:0000766,6.20e-11,72;CL:0000151,3.10e-10,36;CL:0000775,1.04e-08,3;CL:0002579,1.51e-08,3;CL:0000839,1.93e-08,66;CL:0000557,2.55e-08,67;CL:0000763,2.67e-07,108;CL:0000049,2.67e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.06e-12;2!UBERON:0003497;3.06e-12;2!UBERON:0003909;3.06e-12;2!UBERON:0003835;3.06e-12;2!UBERON:0001280;1.35e-08;3!UBERON:0004647;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.59e-12,2;UBERON:0003497,2.59e-12,2;UBERON:0003909,2.59e-12,2;UBERON:0003835,2.59e-12,2;UBERON:0001280,1.21e-08,3;UBERON:0004647,1.21e-08,3;UBERON:0005171,1.21e-08,3;UBERON:0002371,2.34e-07,76;UBERON:0001474,7.87e-07,82 | |||
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| ||
|short_description=p12@CSF1 | |||
}} | }} |
Latest revision as of 23:16, 15 September 2015
Short description: | p12@CSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CSF1_5end |
Coexpression cluster: | C1397_Mast_Neutrophils_Monocytederived_Macrophage_leiomyoma_Adipocyte_CD14 |
Association with transcript: | 28bp_to_ENST00000369801_5end |
EntrezGene: | CSF1 |
HGNC: | 2432 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.81e-70 | 5 |
basophil mast progenitor cell | 1.81e-70 | 5 |
endocrine cell | 1.80e-39 | 9 |
endothelial cell of sinusoid | 2.59e-12 | 2 |
endothelial cell of hepatic sinusoid | 2.59e-12 | 2 |
myeloid leukocyte | 6.20e-11 | 72 |
secretory cell | 3.10e-10 | 36 |
neutrophil | 1.04e-08 | 3 |
omentum preadipocyte | 1.51e-08 | 3 |
myeloid lineage restricted progenitor cell | 1.93e-08 | 66 |
granulocyte monocyte progenitor cell | 2.55e-08 | 67 |
myeloid cell | 2.67e-07 | 108 |
common myeloid progenitor | 2.67e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.59e-12 | 2 |
abdomen blood vessel | 2.59e-12 | 2 |
sinusoid | 2.59e-12 | 2 |
abdominal segment blood vessel | 2.59e-12 | 2 |
liver parenchyma | 1.21e-08 | 3 |
liver lobule | 1.21e-08 | 3 |
hepatic duct | 1.21e-08 | 3 |
bone marrow | 2.34e-07 | 76 |
bone element | 7.87e-07 | 82 |