FFCP PHASE1:Hg19::chr10:18689887..18689927,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=783 | |EntrezGene=783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1402 | |HGNC=1402 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=145bp_to_ENST00000377315_5end | |association_with_transcript=145bp_to_ENST00000377315_5end | ||
|cluster_id=chr10:18689887..18689927,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_9_at_CACNB2_5end | |description=CAGE_peak_9_at_CACNB2_5end | ||
|id=chr10:18689887..18689927,+ | |id=chr10:18689887..18689927,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.20e-22;3!UBERON:0006601;1.28e-14;82!UBERON:0004140;1.26e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001950;7.82e-71;20!UBERON:0002619;1.97e-64;22!UBERON:0000956;1.12e-56;25!UBERON:0000203;1.12e-56;25!UBERON:0001869;6.57e-51;32!UBERON:0001893;5.99e-49;34!UBERON:0002791;2.61e-44;32!UBERON:0003528;8.48e-42;34!UBERON:0002020;8.48e-42;34!UBERON:0000200;4.40e-41;6!UBERON:0002780;9.77e-33;41!UBERON:0001890;9.77e-33;41!UBERON:0000073;4.75e-32;53!UBERON:0002616;4.75e-32;53!UBERON:0000955;7.64e-27;68!UBERON:0001872;7.53e-23;5!UBERON:0001017;5.26e-22;75!UBERON:0001870;1.25e-21;3!UBERON:0001016;6.65e-19;83!UBERON:0001871;7.83e-16;6!UBERON:0002702;5.14e-15;2!UBERON:0002771;1.19e-14;2!UBERON:0002680;4.12e-13;9!UBERON:0001895;4.12e-13;9!UBERON:0002021;5.40e-13;5!UBERON:0002037;1.36e-11;6!UBERON:0007023;5.14e-10;114!UBERON:0004733;7.30e-10;12!UBERON:0002028;7.30e-10;12!UBERON:0004732;4.12e-09;13!UBERON:0002581;2.33e-08;1!UBERON:0002902;2.33e-08;1!UBERON:0003112;2.33e-08;1!UBERON:0011158;2.33e-08;1!UBERON:0009899;2.33e-08;1!UBERON:0007190;2.33e-08;1!UBERON:0003128;2.33e-08;1!UBERON:0001703;2.33e-08;1!UBERON:0002241;2.33e-08;1!UBERON:0011216;2.57e-08;132!UBERON:0001882;5.43e-08;1!UBERON:0002022;5.43e-08;1!UBERON:0005403;5.43e-08;1 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.93e-59!57;UBERON:0005068!5.93e-59!57;UBERON:0006241!5.93e-59!57;UBERON:0007135!5.93e-59!57;UBERON:0002616!2.36e-53!59;UBERON:0000955!1.04e-52!69;UBERON:0006238!1.04e-52!69;UBERON:0001017!2.60e-48!82;UBERON:0005743!3.96e-48!86;UBERON:0002780!3.68e-45!41;UBERON:0001890!3.68e-45!41;UBERON:0006240!3.68e-45!41;UBERON:0003080!6.11e-44!42;UBERON:0003075!2.64e-43!86;UBERON:0007284!2.64e-43!86;UBERON:0000073!1.11e-42!94;UBERON:0001016!1.11e-42!94;UBERON:0002619!1.99e-42!22;UBERON:0001950!5.19e-42!20;UBERON:0002346!5.90e-41!90;UBERON:0001893!1.41e-39!34;UBERON:0002020!3.65e-39!34;UBERON:0003528!3.65e-39!34;UBERON:0001869!1.16e-38!32;UBERON:0007023!3.06e-38!115;UBERON:0002791!5.72e-37!33;UBERON:0000956!5.95e-37!25;UBERON:0000203!5.95e-37!25;UBERON:0003056!4.98e-33!61;UBERON:0000033!1.32e-32!123;UBERON:0000153!1.27e-30!129;UBERON:0007811!1.27e-30!129;UBERON:0004121!1.74e-23!169;UBERON:0000924!1.05e-22!173;UBERON:0006601!1.05e-22!173;UBERON:0000200!6.29e-20!6;UBERON:0004733!7.03e-16!12;UBERON:0002028!7.03e-16!12;UBERON:0007277!7.03e-16!12;UBERON:0003076!1.59e-15!15;UBERON:0003057!1.59e-15!15;UBERON:0000025!6.57e-15!194;UBERON:0004732!1.51e-14!13;UBERON:0001871!1.83e-14!7;UBERON:0000064!6.44e-13!219;UBERON:0002680!1.74e-12!9;UBERON:0001895!1.74e-12!9;UBERON:0010092!1.74e-12!9;UBERON:0001872!2.60e-11!5;UBERON:0004111!5.99e-11!241;UBERON:0002021!7.40e-11!5;UBERON:0002771!1.15e-10!3;UBERON:0000349!1.69e-10!5;UBERON:0000477!8.41e-10!286;UBERON:0000483!1.16e-09!309;UBERON:0000988!1.67e-09!3;UBERON:0000119!1.80e-09!312;UBERON:0002298!3.06e-09!8;UBERON:0000475!2.78e-08!365;UBERON:0000481!6.19e-08!347;UBERON:0001870!8.69e-08!2;UBERON:0001876!1.17e-07!2;UBERON:0000062!1.51e-07!511;UBERON:0003296!1.79e-07!4;UBERON:0010133!1.79e-07!4;UBERON:0001905!3.78e-07!2;UBERON:0002757!3.78e-07!2;UBERON:0010134!3.78e-07!2;UBERON:0002784!3.78e-07!2;UBERON:0005408!3.78e-07!2;UBERON:0001899!3.78e-07!2;UBERON:0001894!5.26e-07!7;UBERON:0006222!5.26e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.82e-71;20!UBERON:0002619;1.97e-64;22!UBERON:0000956;1.12e-56;25!UBERON:0000203;1.12e-56;25!UBERON:0001869;6.57e-51;32!UBERON:0001893;5.99e-49;34!UBERON:0002791;2.61e-44;32!UBERON:0003528;8.48e-42;34!UBERON:0002020;8.48e-42;34!UBERON:0000200;4.40e-41;6!UBERON:0002780;9.77e-33;41!UBERON:0001890;9.77e-33;41!UBERON:0000073;4.75e-32;53!UBERON:0002616;4.75e-32;53!UBERON:0000955;7.64e-27;68!UBERON:0001872;7.53e-23;5!UBERON:0001017;5.26e-22;75!UBERON:0001870;1.25e-21;3!UBERON:0001016;6.65e-19;83!UBERON:0001871;7.83e-16;6!UBERON:0002702;5.14e-15;2!UBERON:0002771;1.19e-14;2!UBERON:0002680;4.12e-13;9!UBERON:0001895;4.12e-13;9!UBERON:0002021;5.40e-13;5!UBERON:0002037;1.36e-11;6!UBERON:0007023;5.14e-10;114!UBERON:0004733;7.30e-10;12!UBERON:0002028;7.30e-10;12!UBERON:0004732;4.12e-09;13!UBERON:0002581;2.33e-08;1!UBERON:0002902;2.33e-08;1!UBERON:0003112;2.33e-08;1!UBERON:0011158;2.33e-08;1!UBERON:0009899;2.33e-08;1!UBERON:0007190;2.33e-08;1!UBERON:0003128;2.33e-08;1!UBERON:0001703;2.33e-08;1!UBERON:0002241;2.33e-08;1!UBERON:0011216;2.57e-08;132!UBERON:0001882;5.43e-08;1!UBERON:0002022;5.43e-08;1!UBERON:0005403;5.43e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.65e-71,20;UBERON:0002619,9.81e-65,22;UBERON:0000073,5.06e-58,53;UBERON:0002616,5.06e-58,53;UBERON:0001869,4.21e-57,32;UBERON:0000956,6.07e-57,25;UBERON:0000203,6.07e-57,25;UBERON:0001049,9.29e-55,56;UBERON:0005068,9.29e-55,56;UBERON:0006241,9.29e-55,56;UBERON:0007135,9.29e-55,56;UBERON:0001893,1.18e-53,34;UBERON:0000955,1.20e-52,68;UBERON:0006238,1.20e-52,68;UBERON:0002791,2.23e-50,32;UBERON:0002780,1.48e-49,41;UBERON:0001890,1.48e-49,41;UBERON:0003080,1.48e-49,41;UBERON:0006240,1.48e-49,41;UBERON:0001017,1.27e-47,81;UBERON:0003528,2.51e-47,34;UBERON:0002020,2.51e-47,34;UBERON:0001016,1.54e-42,89;UBERON:0000200,3.59e-41,6;UBERON:0003075,2.43e-36,82;UBERON:0007284,2.43e-36,82;UBERON:0002346,1.75e-34,86;UBERON:0003056,1.84e-32,61;UBERON:0010371,1.14e-30,104;UBERON:0007023,1.41e-30,114;UBERON:0010314,9.30e-26,132;UBERON:0001872,5.55e-23,5;UBERON:0004121,2.47e-22,171;UBERON:0000924,2.47e-22,171;UBERON:0006601,2.47e-22,171;UBERON:0001870,1.17e-21,3;UBERON:0011216,4.61e-16,223;UBERON:0001871,7.26e-16,6;UBERON:0002702,3.88e-15,2;UBERON:0000025,8.44e-15,192;UBERON:0002771,1.93e-14,2;UBERON:0002021,4.58e-13,5;UBERON:0002680,5.12e-13,9;UBERON:0001895,5.12e-13,9;UBERON:0010092,5.12e-13,9;UBERON:0002037,1.36e-11,6;UBERON:0006215,1.36e-11,6;UBERON:0004111,5.55e-11,240;UBERON:0004733,8.57e-10,12;UBERON:0002028,8.57e-10,12;UBERON:0007277,8.57e-10,12;UBERON:0004732,4.77e-09,13;UBERON:0000483,1.31e-08,306;UBERON:0002581,1.52e-08,1;UBERON:0000119,1.75e-08,309;UBERON:0007190,2.33e-08,1;UBERON:0002902,2.50e-08,1;UBERON:0009899,2.50e-08,1;UBERON:0003112,3.57e-08,1;UBERON:0011158,3.57e-08,1;UBERON:0003128,3.57e-08,1;UBERON:0001703,3.57e-08,1;UBERON:0002241,3.57e-08,1;UBERON:0004761,3.57e-08,1;UBERON:0009617,3.57e-08,1;UBERON:0002022,4.41e-08,1;UBERON:0001882,5.82e-08,1;UBERON:0005403,5.82e-08,1;UBERON:0003076,7.49e-08,15;UBERON:0003057,7.49e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.492603536699674,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0.984685914873589,0,0,0,0,0,0.251932747854276,0,0.861593638227486,0,0,0,0,0,0,0,0,2.31920245404628,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,7.62908681585416,11.6108222927786,5.02430952221031,1.09692698576986,0.871507708151921,0,0,0,0,0,2.82483166997221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,2.34249945036751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,3.69509098676994,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,1.94398581305679,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.3184990331373,2.754200475543,0,0.998361463831671,0.372578417648301,0,0,0,0,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22035527683273,2.8339315265117,0.957803154342908,1.23069818544453,0,2.42050383624763,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.566428215499,2.34323429584154,3.10030194751776,2.66346402814409,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0.455324382702595,0,0,0,2.03909198930495,2.95977481032821,0,0,0,0,0.560544326627578,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.154348316215889,0,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8357702351547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.492603536699674,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0.984685914873589,0,0,0,0,0,0.251932747854276,0,0.861593638227486,0,0,0,0,0,0,0,0,2.31920245404628,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,7.62908681585416,11.6108222927786,5.02430952221031,1.09692698576986,0.871507708151921,0,0,0,0,0,2.82483166997221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,2.34249945036751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,3.69509098676994,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,1.94398581305679,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.3184990331373,2.754200475543,0,0.998361463831671,0.372578417648301,0,0,0,0,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22035527683273,2.8339315265117,0.957803154342908,1.23069818544453,0,2.42050383624763,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.566428215499,2.34323429584154,3.10030194751776,2.66346402814409,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0.455324382702595,0,0,0,2.03909198930495,2.95977481032821,0,0,0,0,0.560544326627578,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.154348316215889,0,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8357702351547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@CACNB2 | |short_description=p9@CACNB2 | ||
}} | }} |
Latest revision as of 12:10, 17 September 2015
Short description: | p9@CACNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CACNB2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 145bp_to_ENST00000377315_5end |
EntrezGene: | CACNB2 |
HGNC: | 1402 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data