FFCP PHASE1:Hg19::chr13:46742704..46742715,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_uc001vaz.3_5end | |association_with_transcript=-5bp_to_uc001vaz.3_5end | ||
|cluster_id=chr13:46742704..46742715,- | |||
|coexpression_cluster_id=C132 | |coexpression_cluster_id=C132 | ||
|description=CAGE_peak_25_at_LCP1_5end | |description=CAGE_peak_25_at_LCP1_5end | ||
|id=chr13:46742704..46742715,- | |id=chr13:46742704..46742715,- | ||
|ontology_enrichment_celltype=CL:0000453;4.45e-38;5!CL:0000990;2.47e-21;8!CL:0000451;1.62e-17;10!CL:0002393;1.22e-08;6!CL:0002397;1.22e-08;6!CL:0001014;4.42e-07;2!CL:0001016;4.42e-07;2 | |ontology_enrichment_celltype=CL:0002009!1.46e-20!65;CL:0000738!2.90e-20!140;CL:0002194!1.20e-19!63;CL:0000576!1.20e-19!63;CL:0000040!1.20e-19!63;CL:0000559!1.20e-19!63;CL:0000557!1.52e-19!71;CL:0000988!1.66e-18!182;CL:0000839!2.87e-18!70;CL:0002087!8.63e-18!119;CL:0000766!1.29e-17!76;CL:0000037!3.99e-17!172;CL:0000566!3.99e-17!172;CL:0000763!5.64e-17!112;CL:0000049!5.64e-17!112;CL:0002057!5.33e-16!42;CL:0002031!9.95e-16!124;CL:0002032!1.48e-15!165;CL:0000837!1.48e-15!165;CL:0000860!1.47e-14!45;CL:0000080!1.62e-12!6;CL:0000990!3.76e-09!8;CL:0002393!5.85e-09!9;CL:0002397!5.85e-09!9;CL:0000453!1.78e-08!5;CL:0000451!2.57e-07!10 | ||
| | |ontology_enrichment_celltype_v019=CL:0000453;4.45e-38;5!CL:0000990;2.47e-21;8!CL:0000451;1.62e-17;10!CL:0002393;1.22e-08;6!CL:0002397;1.22e-08;6!CL:0001014;4.42e-07;2!CL:0001016;4.42e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000453,3.35e-38,5;CL:0000990,2.11e-21,8;CL:0000451,1.43e-17,10;CL:0002393,3.41e-12,9;CL:0002397,3.41e-12,9;CL:0000763,1.19e-11,108;CL:0000049,1.19e-11,108;CL:0002009,1.04e-08,61;CL:0000557,6.97e-08,67;CL:0000738,2.37e-07,136;CL:0002032,2.41e-07,161;CL:0000837,2.41e-07,161;CL:0001014,3.70e-07,2;CL:0001016,3.70e-07,2;CL:0000037,5.63e-07,168;CL:0002194,9.93e-07,59;CL:0000576,9.93e-07,59;CL:0000040,9.93e-07,59;CL:0000559,9.93e-07,59 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=UBERON:0003124;6.82e-13;1!CL:0000049;8.47e-07;108 | ||
|ontology_enrichment_disease=DOID:2394!2.74e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.44e-27!102;UBERON:0003061!1.44e-27!102;UBERON:0002193!2.24e-25!112;UBERON:0002371!2.05e-16!80;UBERON:0001474!1.06e-14!86;UBERON:0002405!1.90e-14!115;UBERON:0004765!2.44e-11!101;UBERON:0001434!2.44e-11!101;UBERON:0003081!5.71e-11!216;UBERON:0000178!5.14e-08!15;UBERON:0000179!5.14e-08!15;UBERON:0000463!5.14e-08!15;UBERON:0000992!7.84e-08!13;UBERON:0002106!4.04e-07!3;UBERON:0004854!4.04e-07!3;UBERON:0009034!4.04e-07!3;UBERON:0002095!4.04e-07!3;UBERON:0004782!4.04e-07!3;UBERON:0003281!4.04e-07!3;UBERON:0009664!4.04e-07!3;UBERON:0002296!4.04e-07!3;UBERON:0005602!4.04e-07!3;UBERON:0001179!4.04e-07!3;UBERON:0006293!4.04e-07!3;UBERON:0004177!4.29e-07!7;UBERON:0000991!5.68e-07!21;UBERON:0009196!5.68e-07!21;UBERON:0009117!5.68e-07!21;UBERON:0005564!5.68e-07!21 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.57e-07,7;UBERON:0002371,6.96e-07,76 | |||
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| ||
|short_description=p25@LCP1 | |short_description=p25@LCP1 | ||
}} | }} |
Latest revision as of 13:40, 17 September 2015
Short description: | p25@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_LCP1_5end |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | -5bp_to_uc001vaz.3_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 3.35e-38 | 5 |
conventional dendritic cell | 2.11e-21 | 8 |
dendritic cell | 1.43e-17 | 10 |
intermediate monocyte | 3.41e-12 | 9 |
CD14-positive, CD16-positive monocyte | 3.41e-12 | 9 |
myeloid cell | 1.19e-11 | 108 |
common myeloid progenitor | 1.19e-11 | 108 |
macrophage dendritic cell progenitor | 1.04e-08 | 61 |
granulocyte monocyte progenitor cell | 6.97e-08 | 67 |
leukocyte | 2.37e-07 | 136 |
hematopoietic oligopotent progenitor cell | 2.41e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.41e-07 | 161 |
CD1a-positive Langerhans cell | 3.70e-07 | 2 |
immature CD1a-positive Langerhans cell | 3.70e-07 | 2 |
hematopoietic stem cell | 5.63e-07 | 168 |
monopoietic cell | 9.93e-07 | 59 |
monocyte | 9.93e-07 | 59 |
monoblast | 9.93e-07 | 59 |
promonocyte | 9.93e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.57e-07 | 7 |
bone marrow | 6.96e-07 | 76 |