FFCP PHASE1:Hg19::chr12:52430849..52430860,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3164 | |EntrezGene=3164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7980 | |HGNC=7980 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_ENST00000546842_5end | |association_with_transcript=-100bp_to_ENST00000546842_5end | ||
|cluster_id=chr12:52430849..52430860,+ | |||
|description=CAGE_peak_23_at_NR4A1_5end | |description=CAGE_peak_23_at_NR4A1_5end | ||
|id=chr12:52430849..52430860,+ | |id=chr12:52430849..52430860,+ | ||
|ontology_enrichment_celltype=CL:0002537;3.16e-12;5!CL:0002593;1.44e-08;2!CL:0001014;2.31e-08;2!CL:0001016;2.31e-08;2!CL:0000860;2.83e-07;33!CL:0002057;2.83e-07;33 | |ontology_enrichment_celltype=CL:0002057!1.46e-10!42;CL:0000860!1.69e-09!45;CL:0000557!1.17e-08!71;CL:0000839!6.58e-08!70;CL:0000766!8.25e-07!76 | ||
| | |ontology_enrichment_celltype_v019=CL:0002537;3.16e-12;5!CL:0002593;1.44e-08;2!CL:0001014;2.31e-08;2!CL:0001016;2.31e-08;2!CL:0000860;2.83e-07;33!CL:0002057;2.83e-07;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.35e-12,5;CL:0002593,1.61e-08,2;CL:0001014,2.00e-08,2;CL:0001016,2.00e-08,2;CL:0000557,2.72e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0005754;8.02e-16;1!UBERON:0007297;1.44e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000998;8.02e-16;1!UBERON:0006868;8.02e-16;1!UBERON:0000996;2.06e-15;1!UBERON:0002135;2.06e-15;1!UBERON:0000305;5.37e-09;7!UBERON:0002456;1.44e-08;2!UBERON:0002133;2.31e-08;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.62e-11!115;UBERON:0000062!4.06e-07!511;UBERON:0002371!5.75e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;8.02e-16;1!UBERON:0006868;8.02e-16;1!UBERON:0000996;2.06e-15;1!UBERON:0002135;2.06e-15;1!UBERON:0000305;5.37e-09;7!UBERON:0002456;1.44e-08;2!UBERON:0002133;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,8.63e-16,1;UBERON:0006868,8.63e-16,1;UBERON:0002135,1.16e-15,1;UBERON:0000996,2.38e-15,1;UBERON:0000305,5.59e-09,7;UBERON:0002456,1.61e-08,2;UBERON:0002133,1.73e-08,2;UBERON:0004871,5.76e-08,8;UBERON:0003081,2.88e-07,203 | |||
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| ||
|short_description=p23@NR4A1 | |short_description=p23@NR4A1 | ||
}} | }} |
Latest revision as of 21:03, 18 September 2015
Short description: | p23@NR4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_NR4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000546842_5end |
EntrezGene: | NR4A1 |
HGNC: | 7980 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.35e-12 | 5 |
smooth muscle cell of the internal thoracic artery | 1.61e-08 | 2 |
CD1a-positive Langerhans cell | 2.00e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.00e-08 | 2 |
granulocyte monocyte progenitor cell | 2.72e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 8.63e-16 | 1 |
seminal fluid secreting gland | 8.63e-16 | 1 |
mitral valve | 1.16e-15 | 1 |
vagina | 2.38e-15 | 1 |
amnion | 5.59e-09 | 7 |
internal thoracic artery | 1.61e-08 | 2 |
atrioventricular valve | 1.73e-08 | 2 |
somatic layer of lateral plate mesoderm | 5.76e-08 | 8 |
lateral plate mesoderm | 2.88e-07 | 203 |