FFCP PHASE1:Hg19::chr4:152149009..152149020,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152503 | |EntrezGene=152503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30418 | |HGNC=30418 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_ENST00000514013_5end | |association_with_transcript=48bp_to_ENST00000514013_5end | ||
|cluster_id=chr4:152149009..152149020,- | |||
|coexpression_cluster_id=C2779 | |coexpression_cluster_id=C2779 | ||
|description=CAGE_peak_7_at_SH3D19_5end | |description=CAGE_peak_7_at_SH3D19_5end | ||
|id=chr4:152149009..152149020,- | |id=chr4:152149009..152149020,- | ||
|ontology_enrichment_celltype=CL:0000136;9.70e-28;13!CL:0002195;1.19e-08;2!CL:0002571;1.19e-08;2!CL:0002617;2.11e-08;2!CL:0002549;7.06e-08;2 | |ontology_enrichment_celltype=CL:0000136!6.06e-11!15;CL:0000222!8.69e-09!119;CL:0002139!3.18e-07!24;CL:0000680!3.46e-07!57;CL:0000056!3.46e-07!57;CL:0000355!3.46e-07!57 | ||
| | |ontology_enrichment_celltype_v019=CL:0000136;9.70e-28;13!CL:0002195;1.19e-08;2!CL:0002571;1.19e-08;2!CL:0002617;2.11e-08;2!CL:0002549;7.06e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.03e-24,15;CL:0002195,1.15e-08,2;CL:0002571,1.15e-08,2;CL:0002617,1.80e-08,2;CL:0002549,2.33e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003688;2.71e-10;6!UBERON:0002358;2.71e-10;6!UBERON:0003684;2.71e-10;6!UBERON:0001178;2.71e-10;6!UBERON:0004457;3.95e-10;9!UBERON:0000042;3.95e-10;9!UBERON:0001443;3.42e-08;11!UBERON:0005629;7.06e-08;2!UBERON:0005358;7.06e-08;2!UBERON:0001886;7.06e-08;2!UBERON:0005406;7.06e-08;2!UBERON:0004086;7.06e-08;2!UBERON:0005282;7.06e-08;2!UBERON:0005281;7.06e-08;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-13!115;UBERON:0004111!2.57e-10!241;UBERON:0002385!4.24e-10!63;UBERON:0001015!4.24e-10!63;UBERON:0000383!4.24e-10!63;UBERON:0000477!4.70e-10!286;UBERON:0004872!3.55e-09!84;UBERON:0002049!4.04e-09!79;UBERON:0007798!4.04e-09!79;UBERON:0001134!4.39e-09!61;UBERON:0002036!4.39e-09!61;UBERON:0003082!4.39e-09!61;UBERON:0004535!4.80e-09!110;UBERON:0001009!4.99e-09!113;UBERON:0000055!2.56e-08!69;UBERON:0000025!4.22e-08!194;UBERON:0000475!6.66e-08!365;UBERON:0000468!8.27e-08!659;UBERON:0000483!9.06e-08!309;UBERON:0000119!1.08e-07!312;UBERON:0000486!2.20e-07!82;UBERON:0001013!3.14e-07!14;UBERON:0004290!3.84e-07!70;UBERON:0001981!3.87e-07!60;UBERON:0007500!3.87e-07!60;UBERON:0004537!3.87e-07!60;UBERON:0006965!3.87e-07!60;UBERON:0000914!5.79e-07!83;UBERON:0002329!5.79e-07!83;UBERON:0003077!5.79e-07!83;UBERON:0003059!5.79e-07!83;UBERON:0007282!5.79e-07!83;UBERON:0009618!5.79e-07!83;UBERON:0007285!5.79e-07!83;UBERON:0000467!9.16e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.71e-10;6!UBERON:0002358;2.71e-10;6!UBERON:0003684;2.71e-10;6!UBERON:0001178;2.71e-10;6!UBERON:0004457;3.95e-10;9!UBERON:0000042;3.95e-10;9!UBERON:0001443;3.42e-08;11!UBERON:0005629;7.06e-08;2!UBERON:0005358;7.06e-08;2!UBERON:0001886;7.06e-08;2!UBERON:0005406;7.06e-08;2!UBERON:0004086;7.06e-08;2!UBERON:0005282;7.06e-08;2!UBERON:0005281;7.06e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.91e-10,6;UBERON:0002358,1.91e-10,6;UBERON:0003684,1.91e-10,6;UBERON:0001178,1.91e-10,6;UBERON:0005629,2.33e-08,2;UBERON:0005358,2.33e-08,2;UBERON:0001886,2.33e-08,2;UBERON:0004086,2.33e-08,2;UBERON:0005282,2.33e-08,2;UBERON:0005281,2.33e-08,2;UBERON:0001443,2.81e-08,11;UBERON:0005406,3.60e-08,2;UBERON:0004457,1.68e-07,12;UBERON:0000042,1.68e-07,12 | |||
|phase1_expression=5.4503513781167,1.49870366723688,9.16203626623813,0,2.68176656656373,1.74467704820074,2.53299878168311,0.631719873426831,0.783556884599516,0,0,0,0,0,0,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0.361439152384566,0,0.579386075843295,0.795285947051099,0,0,0,0,0.392937226493138,0,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,0,0.419499436209906,0.825354125820202,0.417989933073621,0.258416759169329,2.13459757612026,1.67360306382335,0.805658634218294,0,0.24406205754817,0.735326160691737,0,1.3394959242612,0.673588117878509,0.900891843866578,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.794455084879313,0,0,0,0,0,2.48968828319813,0.269421344139376,0,1.81628913173918,1.72852777344,0,0,0,0.298897361103602,0,0,0,0.61246251376468,0.122834317311768,0.516628905878827,1.18800285728205,0,0,0,0.505008341862199,0,1.38532057742091,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0.504867548488229,0.0920498986422993,0.323292113637624,0.355009592516614,0,0,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,1.01056513432752,0,0.761016608938393,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,3.57656445851882,0,0,0,0,0,0,2.14466990487221,0,0,0,2.84313558994037,0,0.301439377059586,0.871533458600294,0.599837947092342,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48107807818777,0.767309866440312,0.280660094433074,2.81906128362542,1.53512174720011,0.160853921143607,1.48418066444991,0,0.177561725313127,0.246381468041427,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.859361958946189,0.580066775656914,0,0.0890320356467374,0,0,1.14851441245126,0,0.929691098594572,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.632758849437452,0.38126038784765,0.255897791311334,0,0,0,0.719489830333259,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0,0.974853958525138,1.05650146756755,0,0.282810863907425,0,0,0,0.876901770507525,0,0,0,0.30982349809975,0,0.143411352204052,0.392996164052485,0,0,1.05553817648832,0.987884678879706,0,0,0,0,0,1.12972560932135,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39524537815682,0,0,0,1.43246690842614,0.593929361665277,2.15012491469462,0,0.281338832821026,0,0,0,0.996239941255349,0.828851746593443,0,0,0,0,0,0,0,1.08507746200627,0,1.11136990144637,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,2.23300811812344,0.549585560411174,1.5991043280559,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.796118080530053,0,0.296521128680622,0,0,0.606610196826093,1.60515529459758,0.234264445725339,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0,0,0,1.16386819786103,0,0.451961481561065,0,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0.429765441419957,0,0.558564802544508,0.916641696046735,0,0,0,0.89268582976749,1.20930250476107,0,0,0,0.0824158583811665,0,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0.105600336519406,0,0,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0,0,0.704815022316672,1.60181118851542,0.471612915298998,0.414239055347196,0,0,0,0,7.07223144380316,7.7713867147037,9.19036730290385,7.86894313703531,0,0,0,0.250381861413,0.573409195690071,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0.895528817321244,0.701139929541673,0.554805861502613,1.51522404220071,1.25783950876288,0.889811221596536,0.686520205190771,0.151230923763239,0.621748802331122,0.295710299979268,1.11507737014592,0.449803112163605,0.465788870628778,0,0.265841714557995,0,0.450772826991655,0.380805212168795,1.22061219961398,0.181848659202559,0.537052785212442,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.19024743058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| ||
|short_description=p7@SH3D19 | |short_description=p7@SH3D19 | ||
}} | }} |
Latest revision as of 02:36, 16 September 2015
Short description: | p7@SH3D19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SH3D19_5end |
Coexpression cluster: | C2779_Adipocyte_mature_adipose_Preadipocyte_Fibroblast_Mesenchymal_Hair |
Association with transcript: | 48bp_to_ENST00000514013_5end |
EntrezGene: | SH3D19 |
HGNC: | 30418 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.03e-24 | 15 |
hepatic stem cell | 1.15e-08 | 2 |
hepatic mesenchymal stem cell | 1.15e-08 | 2 |
adipocyte of breast | 1.80e-08 | 2 |
fibroblast of choroid plexus | 2.33e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.91e-10 | 6 |
peritoneum | 1.91e-10 | 6 |
abdominal cavity | 1.91e-10 | 6 |
visceral peritoneum | 1.91e-10 | 6 |
vascular plexus | 2.33e-08 | 2 |
ventricle of nervous system | 2.33e-08 | 2 |
choroid plexus | 2.33e-08 | 2 |
brain ventricle | 2.33e-08 | 2 |
ventricular system of brain | 2.33e-08 | 2 |
ventricular system of central nervous system | 2.33e-08 | 2 |
chest | 2.81e-08 | 11 |
perirenal fat | 3.60e-08 | 2 |
cavity lining | 1.68e-07 | 12 |
serous membrane | 1.68e-07 | 12 |