FFCP PHASE1:Hg19::chr22:38902325..38902347,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10521 | |EntrezGene=10521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2740 | |HGNC=2740 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMU5,Q59F66,Q92841 | |UniProt=C9JMU5,Q59F66,Q92841 | ||
|association_with_transcript=0bp_to_ENST00000381633,ENST00000396821,ENST00000404499,NM_001098504,NM_006386,uc003avx.3,uc003avy.3_5end | |association_with_transcript=0bp_to_ENST00000381633,ENST00000396821,ENST00000404499,NM_001098504,NM_006386,uc003avx.3,uc003avy.3_5end | ||
|cluster_id=chr22:38902325..38902347,- | |||
|coexpression_cluster_id=C1025 | |coexpression_cluster_id=C1025 | ||
|description=CAGE_peak_2_at_DDX17_5end | |description=CAGE_peak_2_at_DDX17_5end | ||
|id=chr22:38902325..38902347,- | |id=chr22:38902325..38902347,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002780;1.01e-10;41!UBERON:0001890;1.01e-10;41!UBERON:0000073;4.47e-10;53!UBERON:0002616;4.47e-10;53!UBERON:0002791;1.52e-09;32!UBERON:0001893;1.52e-09;34!UBERON:0007023;1.62e-09;114!UBERON:0003528;1.68e-09;34!UBERON:0002020;1.68e-09;34!UBERON:0001869;2.97e-09;32!UBERON:0002619;2.17e-08;22!UBERON:0000956;8.72e-08;25!UBERON:0000203;8.72e-08;25!UBERON:0001950;9.44e-08;20!UBERON:0001017;1.11e-07;75!UBERON:0000955;3.93e-07;68!UBERON:0000178;4.80e-07;15!UBERON:0000179;4.80e-07;15!UBERON:0000463;4.80e-07;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.90e-31!115;UBERON:0001049!8.09e-18!57;UBERON:0005068!8.09e-18!57;UBERON:0006241!8.09e-18!57;UBERON:0007135!8.09e-18!57;UBERON:0002616!2.59e-15!59;UBERON:0000955!1.14e-14!69;UBERON:0006238!1.14e-14!69;UBERON:0003080!1.45e-14!42;UBERON:0000073!2.19e-14!94;UBERON:0001016!2.19e-14!94;UBERON:0005743!2.86e-14!86;UBERON:0002780!4.15e-14!41;UBERON:0001890!4.15e-14!41;UBERON:0006240!4.15e-14!41;UBERON:0001017!4.29e-14!82;UBERON:0001893!3.61e-11!34;UBERON:0002791!5.28e-11!33;UBERON:0002020!5.95e-11!34;UBERON:0003528!5.95e-11!34;UBERON:0002346!1.10e-10!90;UBERON:0003075!1.12e-10!86;UBERON:0007284!1.12e-10!86;UBERON:0001869!3.62e-10!32;UBERON:0003056!4.95e-09!61;UBERON:0002619!2.21e-08!22;UBERON:0000153!3.48e-08!129;UBERON:0007811!3.48e-08!129;UBERON:0000956!8.45e-08!25;UBERON:0000203!8.45e-08!25;UBERON:0001950!9.41e-08!20;UBERON:0000178!4.95e-07!15;UBERON:0000179!4.95e-07!15;UBERON:0000463!4.95e-07!15;UBERON:0000033!6.45e-07!123;UBERON:0000924!8.22e-07!173;UBERON:0006601!8.22e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.01e-10;41!UBERON:0001890;1.01e-10;41!UBERON:0000073;4.47e-10;53!UBERON:0002616;4.47e-10;53!UBERON:0002791;1.52e-09;32!UBERON:0001893;1.52e-09;34!UBERON:0007023;1.62e-09;114!UBERON:0003528;1.68e-09;34!UBERON:0002020;1.68e-09;34!UBERON:0001869;2.97e-09;32!UBERON:0002619;2.17e-08;22!UBERON:0000956;8.72e-08;25!UBERON:0000203;8.72e-08;25!UBERON:0001950;9.44e-08;20!UBERON:0001017;1.11e-07;75!UBERON:0000955;3.93e-07;68!UBERON:0000178;4.80e-07;15!UBERON:0000179;4.80e-07;15!UBERON:0000463;4.80e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.71e-30,114;UBERON:0001049,2.33e-17,56;UBERON:0005068,2.33e-17,56;UBERON:0006241,2.33e-17,56;UBERON:0007135,2.33e-17,56;UBERON:0000073,3.39e-16,53;UBERON:0002616,3.39e-16,53;UBERON:0000955,2.98e-14,68;UBERON:0006238,2.98e-14,68;UBERON:0002780,4.15e-14,41;UBERON:0001890,4.15e-14,41;UBERON:0003080,4.15e-14,41;UBERON:0006240,4.15e-14,41;UBERON:0001016,8.57e-14,89;UBERON:0001017,1.08e-13,81;UBERON:0003075,6.80e-12,82;UBERON:0007284,6.80e-12,82;UBERON:0002346,7.25e-12,86;UBERON:0001893,3.61e-11,34;UBERON:0003528,5.95e-11,34;UBERON:0002020,5.95e-11,34;UBERON:0002791,1.70e-10,32;UBERON:0001869,3.62e-10,32;UBERON:0003056,4.58e-09,61;UBERON:0002619,2.21e-08,22;UBERON:0000956,8.45e-08,25;UBERON:0000203,8.45e-08,25;UBERON:0001950,9.41e-08,20;UBERON:0010371,4.74e-07,104;UBERON:0000178,4.95e-07,15;UBERON:0000179,4.95e-07,15;UBERON:0000463,4.95e-07,15 | |||
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|phase1_expression=30.8853244759946,31.4727770119745,34.6747834076089,22.0161256376887,27.2646267600646,27.9148327712118,10.1319951267324,18.3198763293781,18.0218083457889,22.3617882216373,15.3516256953934,55.4841085210638,54.5997644932899,41.7092609475357,37.7793008329824,39.6671836406547,39.1751443215585,33.5942641578192,34.643228714126,42.7230071526454,35.9041216589885,36.9876571344144,47.8014098508865,43.7998160233229,47.4551177668355,47.7583785924695,42.7744071034217,47.0690472255802,44.4501632839262,51.8169687431237,23.2224184974114,14.7107395916628,23.7952675834818,21.8154865998405,65.227382888614,39.807385096478,49.0312733689195,29.3617566521895,30.6833004629317,30.1645110295034,60.6810935190195,77.0866925125171,75.7272168844508,58.5954902281646,54.0362599474998,68.8938733773398,49.7398138978165,51.8071538907501,47.6947811178459,43.4415512406447,45.3404450556508,40.4384613109481,38.9562619232379,41.3110197493649,40.6279459783025,59.4845792954631,58.401916112379,61.5742347379532,57.8498556581006,55.1997926570881,47.310947309129,50.4672489285676,38.8954132362182,53.2780938165868,50.7866167600022,56.1711372444228,71.0017363854955,35.4260618012008,35.9823213709939,35.8361593763442,47.8265607080361,55.9782006701098,62.6595527132951,33.8008458099107,36.1427309940574,28.9328930801559,51.4465130650948,57.5177499582969,67.3440208260766,35.0565674801736,42.9660022750035,40.0034496744548,56.3187982276233,87.382177801941,107.63061971749,72.1174076137397,96.095036888643,93.6846477125808,80.6474744797532,88.7269991717889,113.84259382189,88.6728155950118,87.5405692406774,70.0508041468837,36.4330565937998,57.1543463961917,58.4228017238084,48.3403238181473,63.5308631908483,90.7822669971382,72.0288209260235,89.0081874781299,103.258166056193,77.9873198196215,67.1701469042629,69.3401090046734,113.737622781307,66.8636688968024,69.1915729018552,70.050547361166,69.6402044820338,101.141276921533,107.507758292494,131.362546592049,127.533339042072,72.7445980118375,62.4649404571132,65.6328420871823,112.593762948679,96.5253205402013,94.4071008091807,80.7884237781118,86.5806934697193,115.059963427822,118.684190224729,99.2096686064431,99.3564876274466,51.8129330087562,34.7672254518559,50.9781901667452,56.0755792522112,28.1694361075527,19.051521714686,36.5053543908412,37.6003432976917,41.5709509417564,50.8983006112704,45.2570429381451,55.9646117611282,45.0110676849005,41.5458536328486,71.1871275330068,23.3148984507227,20.3931443531436,38.6211398449073,36.2189853582476,34.1701958533483,57.7147310818928,57.7714859887929,63.147775226026,41.5413431396414,23.2263340678654,47.905389221848,40.7021718185287,27.6869627898538,28.3371583198269,34.2751745120369,66.9299406248562,69.0186549612218,89.370403608167,26.5867349292037,28.130067911585,39.0499292077071,28.6777202669778,34.8361037589157,50.365046752221,51.4172263313929,48.7607710492785,50.5944903637415,58.854470893224,28.9458755410043,83.0216629847199,131.845289810431,22.6768907114118,28.3274012466332,28.2386041012013,80.3723727536238,77.7327242229285,31.9201543978521,22.9877816058346,45.9020681637731,23.9267521964645,62.553418115353,39.8743589326277,30.8942996884437,58.4239670709435,50.7034813542399,20.1516431377065,26.5336065305772,31.9464220064892,22.2678534022184,25.7181552029845,35.1264289278845,30.6182758610902,38.176830024665,36.9731295108422,60.2389304254713,41.5801000048719,42.0353779773547,37.3166158394591,18.6840716872222,38.3806339815271,40.5384004385164,50.7027331336055,25.8996796319694,21.7606335017304,47.6254646733912,20.3043607856438,76.2405951677663,55.9520358704647,52.9829752898905,59.4180370247117,49.4652140344507,103.313856558297,35.7344364156652,56.7088476330655,32.7388337341627,81.0312415323608,62.5018811781213,64.0118385002495,75.9720527985555,30.7293899594303,31.1991489851297,33.6273884504136,31.6385499885368,30.4012871112344,49.6432983947453,53.6745561702015,50.1957833196319,38.7692345757485,35.8295608243392,36.8627132666588,40.6768784057521,30.2323240950656,51.1099209004178,32.5057549622385,19.4907460050788,30.5231544102797,34.7284461560889,34.9465993331049,29.3381967468168,33.5534343902305,29.1842861506649,27.2359242483532,33.9463134666849,24.623818044569,48.7182600052268,26.6459370226547,32.5143468951806,16.1709582524096,30.4212083572394,61.9181146506904,55.534251228052,78.5804316958078,47.3505488390987,23.3332222005995,18.767298804875,23.6043681841001,23.9258954339681,34.442901598973,43.6583129115835,18.7188261350324,44.7427160278347,48.6907700895323,34.1659300226241,35.9472454925074,31.9460003677861,36.5287972290429,23.7061319387783,18.0282094039923,45.3039291200811,27.3784990212908,34.1851673264075,23.4334584966942,28.3889796656073,24.5270918229329,12.985985791913,19.4724738804355,37.9548852373559,149.769624320367,68.2375363602502,108.639932543365,129.275598215014,138.361707035312,27.5580861228014,45.8386110669933,45.7148044119183,35.9252136647681,35.4754849826466,28.2322474373282,52.3062371713958,53.4865272327371,39.2364061949952,24.0549577492716,50.2866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| ||
|short_description=p2@DDX17 | |short_description=p2@DDX17 | ||
}} | }} |
Latest revision as of 15:56, 24 September 2015
Short description: | p2@DDX17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DDX17_5end |
Coexpression cluster: | C1025_Mast_lung_pineal_pituitary_cerebellum_Neutrophils_CD14 |
Association with transcript: | 0bp_to_ENST00000381633, ENST00000396821, ENST00000404499, NM_001098504, NM_006386, uc003avx.3, uc003avy.3_5end |
EntrezGene: | DDX17 |
HGNC: | 2740 |
UniProt: | C9JMU5Q59F66Q92841 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.71e-30 | 114 |
neural tube | 2.33e-17 | 56 |
neural rod | 2.33e-17 | 56 |
future spinal cord | 2.33e-17 | 56 |
neural keel | 2.33e-17 | 56 |
regional part of nervous system | 3.39e-16 | 53 |
regional part of brain | 3.39e-16 | 53 |
brain | 2.98e-14 | 68 |
future brain | 2.98e-14 | 68 |
regional part of forebrain | 4.15e-14 | 41 |
forebrain | 4.15e-14 | 41 |
anterior neural tube | 4.15e-14 | 41 |
future forebrain | 4.15e-14 | 41 |
nervous system | 8.57e-14 | 89 |
central nervous system | 1.08e-13 | 81 |
neural plate | 6.80e-12 | 82 |
presumptive neural plate | 6.80e-12 | 82 |
neurectoderm | 7.25e-12 | 86 |
telencephalon | 3.61e-11 | 34 |
brain grey matter | 5.95e-11 | 34 |
gray matter | 5.95e-11 | 34 |
regional part of telencephalon | 1.70e-10 | 32 |
cerebral hemisphere | 3.62e-10 | 32 |
pre-chordal neural plate | 4.58e-09 | 61 |
regional part of cerebral cortex | 2.21e-08 | 22 |
cerebral cortex | 8.45e-08 | 25 |
pallium | 8.45e-08 | 25 |
neocortex | 9.41e-08 | 20 |
ecto-epithelium | 4.74e-07 | 104 |
blood | 4.95e-07 | 15 |
haemolymphatic fluid | 4.95e-07 | 15 |
organism substance | 4.95e-07 | 15 |