FFCP PHASE1:Hg19::chr10:11715600..11715620,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=373bp_to_uc001ikv.1_5end | |association_with_transcript=373bp_to_uc001ikv.1_5end | ||
|cluster_id=chr10:11715600..11715620,+ | |||
|coexpression_cluster_id=C577 | |coexpression_cluster_id=C577 | ||
|description=CAGE_peak_1_at_uc001ikv.1_5end | |description=CAGE_peak_1_at_uc001ikv.1_5end | ||
|id=chr10:11715600..11715620,+ | |id=chr10:11715600..11715620,+ | ||
|ontology_enrichment_celltype=CL:0002032;3.28e-23;1!CL:0000557;3.28e-23;1!CL:0000945;3.63e-23;24!CL:0000236;7.36e-16;13!CL:0000542;3.49e-10;53 | |ontology_enrichment_celltype=CL:0000945!2.23e-16!24;CL:0000826!2.23e-16!24;CL:0000236!2.27e-14!14 | ||
| | |ontology_enrichment_celltype_v019=CL:0002032;3.28e-23;1!CL:0000557;3.28e-23;1!CL:0000945;3.63e-23;24!CL:0000236;7.36e-16;13!CL:0000542;3.49e-10;53 | ||
|ontology_enrichment_disease=DOID:0060058;6.20e-10;10 | |ontology_enrichment_celltype_v019_2=CL:0000945,3.80e-23,24;CL:0000826,3.80e-23,24;CL:0000236,9.29e-15,14;CL:0000838,8.24e-11,52;CL:0000542,1.31e-10,53;CL:0000051,1.31e-10,53 | ||
|ontology_enrichment_uberon=UBERON:0002372;3.28e-23;1!UBERON:0001154;3.28e-23;1!UBERON:0001153;3.28e-23;1!UBERON:0009854;3.28e-23;1!UBERON:0001961;3.28e-23;1!UBERON:0001744;3.28e-23;1!UBERON:0001042;3.28e-23;1!UBERON:0001735;3.28e-23;1!UBERON:0006562;2.59e-12;2!UBERON:0009856;8.61e-07;4 | |ontology_enrichment_development_v019=UBERON:0001045;3.28e-23;1!UBERON:0006965;2.59e-12;2!CL:0000051;3.49e-10;53 | ||
|ontology_enrichment_disease=DOID:0060058!3.97e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.20e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.20e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.59e-27!115;UBERON:0001049!2.41e-23!57;UBERON:0005068!2.41e-23!57;UBERON:0006241!2.41e-23!57;UBERON:0007135!2.41e-23!57;UBERON:0001893!6.12e-20!34;UBERON:0002616!6.29e-20!59;UBERON:0002780!1.33e-18!41;UBERON:0001890!1.33e-18!41;UBERON:0006240!1.33e-18!41;UBERON:0001869!3.66e-18!32;UBERON:0003080!4.33e-18!42;UBERON:0002791!1.08e-17!33;UBERON:0002020!6.72e-17!34;UBERON:0003528!6.72e-17!34;UBERON:0000955!3.82e-16!69;UBERON:0006238!3.82e-16!69;UBERON:0001017!1.21e-14!82;UBERON:0003075!5.59e-14!86;UBERON:0007284!5.59e-14!86;UBERON:0005743!9.11e-14!86;UBERON:0002346!3.68e-13!90;UBERON:0002619!6.36e-13!22;UBERON:0000153!4.04e-12!129;UBERON:0007811!4.04e-12!129;UBERON:0000073!4.63e-12!94;UBERON:0001016!4.63e-12!94;UBERON:0003056!1.65e-11!61;UBERON:0001950!2.96e-11!20;UBERON:0000956!3.02e-11!25;UBERON:0000203!3.02e-11!25;UBERON:0000033!1.38e-10!123;UBERON:0002298!4.87e-08!8;UBERON:0000349!5.08e-08!5;UBERON:0002420!2.09e-07!9;UBERON:0007245!2.09e-07!9;UBERON:0010009!2.09e-07!9;UBERON:0010011!2.09e-07!9;UBERON:0000454!2.09e-07!9;UBERON:0002308!2.20e-07!9;UBERON:0000125!2.20e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.28e-23;1!UBERON:0001154;3.28e-23;1!UBERON:0001153;3.28e-23;1!UBERON:0009854;3.28e-23;1!UBERON:0001961;3.28e-23;1!UBERON:0001744;3.28e-23;1!UBERON:0001042;3.28e-23;1!UBERON:0001735;3.28e-23;1!UBERON:0006562;2.59e-12;2!UBERON:0009856;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.67e-23,1;UBERON:0001961,1.67e-23,1;UBERON:0001744,1.67e-23,1;UBERON:0001735,1.67e-23,1;UBERON:0001154,2.62e-23,1;UBERON:0001153,2.62e-23,1;UBERON:0001045,2.62e-23,1 | |||
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| ||
|short_description=p1@uc001ikv.1 | |short_description=p1@uc001ikv.1 | ||
}} | }} |
Latest revision as of 10:43, 23 July 2015
Short description: | p1@uc001ikv.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001ikv.1_5end |
Coexpression cluster: | C577_lymphoma_Burkitt_diffuse_b_myeloma_plasma_appendix |
Association with transcript: | 373bp_to_uc001ikv.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.80e-23 | 24 |
pro-B cell | 3.80e-23 | 24 |
B cell | 9.29e-15 | 14 |
lymphoid lineage restricted progenitor cell | 8.24e-11 | 52 |
lymphocyte | 1.31e-10 | 53 |
common lymphoid progenitor | 1.31e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.67e-23 | 1 |
mucosa-associated lymphoid tissue | 1.67e-23 | 1 |
lymphoid tissue | 1.67e-23 | 1 |
tonsillar ring | 1.67e-23 | 1 |
vermiform appendix | 2.62e-23 | 1 |
caecum | 2.62e-23 | 1 |
midgut | 2.62e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.20e-10 | 10 |