FFCP PHASE1:Hg19::chr11:9781782..9781788,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:9781782..9781788,- | |||
|coexpression_cluster_id=C193 | |coexpression_cluster_id=C193 | ||
|description=CAGE_peak_at_chr11:9781782..9781788,- | |description=CAGE_peak_at_chr11:9781782..9781788,- | ||
|id=chr11:9781782..9781788,- | |id=chr11:9781782..9781788,- | ||
|ontology_enrichment_celltype=CL:0002620;1.77e-17;23!CL:0000136;9.67e-16;13!CL:0002559;2.98e-15;5!CL:0000346;3.93e-15;3!CL:1000428;3.93e-15;3!CL:0002615;1.60e-13;3!CL:0002521;3.29e-07;3 | |ontology_enrichment_celltype=CL:0000055!3.39e-26!180;CL:0000057!4.30e-21!75;CL:0000048!6.06e-17!430;CL:0000723!2.46e-16!436;CL:0000034!1.49e-15!444;CL:0000136!8.87e-15!15;CL:0000680!2.75e-13!57;CL:0000056!2.75e-13!57;CL:0000355!2.75e-13!57;CL:0000183!2.53e-12!59;CL:0002371!3.22e-12!591;CL:0002620!6.11e-12!23;CL:0000187!9.80e-11!54;CL:0000188!3.58e-10!9;CL:0000144!6.33e-10!625;CL:0000393!5.05e-09!60;CL:0000211!5.05e-09!60;CL:0002320!1.24e-08!365;CL:0002559!2.29e-08!4;CL:0000134!7.32e-08!358;CL:0002570!4.21e-07!8;CL:0000346!6.16e-07!3;CL:1000428!6.16e-07!3;CL:0000219!8.36e-07!390;CL:0000548!8.89e-07!679;CL:0000004!8.89e-07!679;CL:0000255!8.89e-07!679 | ||
| | |ontology_enrichment_celltype_v019=CL:0002620;1.77e-17;23!CL:0000136;9.67e-16;13!CL:0002559;2.98e-15;5!CL:0000346;3.93e-15;3!CL:1000428;3.93e-15;3!CL:0002615;1.60e-13;3!CL:0002521;3.29e-07;3 | ||
|ontology_enrichment_disease=DOID:17;9.04e-09;5!DOID:450;9.04e-09;5!DOID:66;9.04e-09;5!DOID:423;9.04e-09;5!DOID:0080000;9.04e-09;5!DOID:11722;9.04e-09;5 | |ontology_enrichment_celltype_v019_2=CL:0002620,2.09e-17,23;CL:0002559,2.47e-15,5;CL:0000346,4.06e-15,3;CL:1000428,4.06e-15,3;CL:0000136,1.27e-13,15;CL:0002615,1.76e-13,3;CL:0000057,7.47e-13,76;CL:0000048,2.28e-12,427;CL:0000723,4.48e-12,433;CL:0000034,1.08e-11,441;CL:0000134,1.86e-08,354;CL:0002320,3.83e-08,361;CL:0002521,3.11e-07,3;CL:0000219,4.86e-07,386 | ||
|ontology_enrichment_uberon=UBERON:0002073;2.98e-15;5!UBERON:0000412;3.93e-15;3!UBERON:0001992;3.93e-15;3!UBERON:0003102;2.68e-14;50!UBERON:0002097;4.01e-14;41!UBERON:0002199;2.09e-13;46!UBERON:0002416;2.09e-13;46!UBERON:0004457;8.91e-12;9!UBERON:0000042;8.91e-12;9!UBERON:0003688;1.11e-11;6!UBERON:0002358;1.11e-11;6!UBERON:0003684;1.11e-11;6!UBERON:0001178;1.11e-11;6!UBERON:0002067;1.72e-08;9!UBERON:0001013;4.65e-08;14!UBERON:0002190;3.29e-07;3 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.04e-09;5!DOID:450;9.04e-09;5!DOID:66;9.04e-09;5!DOID:423;9.04e-09;5!DOID:0080000;9.04e-09;5!DOID:11722;9.04e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.07e-09,5;DOID:450,8.07e-09,5;DOID:66,8.07e-09,5;DOID:423,8.07e-09,5;DOID:0080000,8.07e-09,5;DOID:11722,8.07e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004290!3.23e-15!70;UBERON:0000914!2.76e-14!83;UBERON:0002329!2.76e-14!83;UBERON:0003077!2.76e-14!83;UBERON:0003059!2.76e-14!83;UBERON:0007282!2.76e-14!83;UBERON:0009618!2.76e-14!83;UBERON:0007285!2.76e-14!83;UBERON:0000486!9.57e-13!82;UBERON:0002199!5.38e-12!45;UBERON:0002416!5.38e-12!45;UBERON:0001134!6.44e-12!61;UBERON:0002036!6.44e-12!61;UBERON:0003082!6.44e-12!61;UBERON:0002385!2.65e-11!63;UBERON:0001015!2.65e-11!63;UBERON:0000383!2.65e-11!63;UBERON:0001013!1.61e-10!14;UBERON:0002097!5.65e-10!40;UBERON:0002384!8.96e-09!375;UBERON:0003102!1.58e-08!95;UBERON:0002073!2.29e-08!4;UBERON:0005086!2.29e-08!4;UBERON:0000475!4.20e-08!365;UBERON:0003688!2.81e-07!6;UBERON:0002358!2.81e-07!6;UBERON:0003684!2.81e-07!6;UBERON:0001178!2.81e-07!6;UBERON:0000412!6.16e-07!3;UBERON:0001992!6.16e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;2.98e-15;5!UBERON:0000412;3.93e-15;3!UBERON:0001992;3.93e-15;3!UBERON:0003102;2.68e-14;50!UBERON:0002097;4.01e-14;41!UBERON:0002199;2.09e-13;46!UBERON:0002416;2.09e-13;46!UBERON:0004457;8.91e-12;9!UBERON:0000042;8.91e-12;9!UBERON:0003688;1.11e-11;6!UBERON:0002358;1.11e-11;6!UBERON:0003684;1.11e-11;6!UBERON:0001178;1.11e-11;6!UBERON:0002067;1.72e-08;9!UBERON:0001013;4.65e-08;14!UBERON:0002190;3.29e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.77e-21,46;UBERON:0002416,1.77e-21,46;UBERON:0002097,2.15e-18,41;UBERON:0002073,2.47e-15,5;UBERON:0005086,2.47e-15,5;UBERON:0000412,4.06e-15,3;UBERON:0001992,4.06e-15,3;UBERON:0003688,8.93e-12,6;UBERON:0002358,8.93e-12,6;UBERON:0003684,8.93e-12,6;UBERON:0001178,8.93e-12,6;UBERON:0003102,3.48e-09,99;UBERON:0004457,6.82e-09,12;UBERON:0000042,6.82e-09,12;UBERON:0002067,1.92e-08,9;UBERON:0004016,1.92e-08,9;UBERON:0010083,1.92e-08,9;UBERON:0001013,3.66e-08,14;UBERON:0002384,1.03e-07,371;UBERON:0002329,1.25e-07,71;UBERON:0003059,1.25e-07,71;UBERON:0007282,1.25e-07,71;UBERON:0004290,1.25e-07,71;UBERON:0009618,1.25e-07,71;UBERON:0003077,1.74e-07,72;UBERON:0007285,1.74e-07,72;UBERON:0007524,2.39e-07,73;UBERON:0000486,2.81e-07,83;UBERON:0002190,3.11e-07,3 | |||
|phase1_expression=0.908391896352783,1.2846031433459,1.69145284915165,1.0007329835313,1.34088328328186,1.74467704820074,5.06599756336621,0,2.87304191019822,0,0,0,0,0,0,0,0,0,0.487932798790507,0.246242116153576,0.612002073732759,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,2.00535164254356,0.434539556882471,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,1.98613771219828,0.286836620748814,0,0.560677600142307,0,0,0,0.269421344139376,0,3.02714855289863,0,0.468642863667593,0.312160076830321,1.1409436430889,0,0,0,0,0.204154171254893,0,0,0,0.741800787835671,0.910161361938026,4.31170885089743,0.168336113954066,0,0.277064115484183,0,0,0.751190294532984,0,0.179389635688862,2.13557388818567,4.02670612203168,0,1.44273540933814,1.03056216018252,1.11670113798954,0,0.68205903612839,0,3.22174645248048,8.56724101139703,0.355009592516614,1.20902517873168,1.69560592310488,0,0,0,0,0,0,0,0,0,15.6449532329816,6.43240938192885,8.28809528114883,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,0.43596006883328,0.07333828582095,0,28.6125156681506,0.845302752556,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,1.15825045334063,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.535286966391485,0.157702415033935,0,0,0,2.0694614258501,0,0,1.12948698808508,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,1.66580894032411,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0,0,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.308097234229289,0.460511024178389,0.689182862422653,1.07420244868274,0.725083469571143,0.426133137080504,0.356128142586949,0,0,0,0.10115778085555,0,0.31481234683064,1.3940745403212,0,0,0,0,0,1.48863347743867,0,0,1.02359116524534,0,0.636406495851874,0,1.43897966066652,0.54907405947211,1.06031162111118,0,0,0,1.46290121726877,0,0,0.272999822815972,0.282810863907425,0,0,0,0,1.15755106853338,0,0,0.6196469961995,0.281695602532241,0,0,0,0,0,1.64647446479951,0.75894634753143,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919036730290385,0.655745261419609,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0.233713309847224,2.21922344601045,0,1.76097531226803,0.889811221596536,0,0.453692771289717,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|short_description=p@chr11:9781782..9781788,- | |short_description=p@chr11:9781782..9781788,- | ||
}} | }} |
Latest revision as of 03:50, 24 July 2015
Short description: | p@chr11:9781782..9781788, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:9781782..9781788, - |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.09e-17 | 23 |
hair follicle cell | 2.47e-15 | 5 |
hair follicle dermal papilla cell | 4.06e-15 | 3 |
stem cell of epidermis | 4.06e-15 | 3 |
fat cell | 1.27e-13 | 15 |
adipocyte of omentum tissue | 1.76e-13 | 3 |
fibroblast | 7.47e-13 | 76 |
multi fate stem cell | 2.28e-12 | 427 |
somatic stem cell | 4.48e-12 | 433 |
stem cell | 1.08e-11 | 441 |
mesenchymal cell | 1.86e-08 | 354 |
connective tissue cell | 3.83e-08 | 361 |
subcutaneous fat cell | 3.11e-07 | 3 |
motile cell | 4.86e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
integument | 1.77e-21 | 46 |
integumental system | 1.77e-21 | 46 |
skin of body | 2.15e-18 | 41 |
hair follicle | 2.47e-15 | 5 |
hair follicle placode | 2.47e-15 | 5 |
dermal papilla | 4.06e-15 | 3 |
papillary layer of dermis | 4.06e-15 | 3 |
omentum | 8.93e-12 | 6 |
peritoneum | 8.93e-12 | 6 |
abdominal cavity | 8.93e-12 | 6 |
visceral peritoneum | 8.93e-12 | 6 |
surface structure | 3.48e-09 | 99 |
cavity lining | 6.82e-09 | 12 |
serous membrane | 6.82e-09 | 12 |
dermis | 1.92e-08 | 9 |
dermatome | 1.92e-08 | 9 |
future dermis | 1.92e-08 | 9 |
adipose tissue | 3.66e-08 | 14 |
connective tissue | 1.03e-07 | 371 |
somite | 1.25e-07 | 71 |
presomitic mesoderm | 1.25e-07 | 71 |
presumptive segmental plate | 1.25e-07 | 71 |
dermomyotome | 1.25e-07 | 71 |
trunk paraxial mesoderm | 1.25e-07 | 71 |
paraxial mesoderm | 1.74e-07 | 72 |
presumptive paraxial mesoderm | 1.74e-07 | 72 |
dense mesenchyme tissue | 2.39e-07 | 73 |
multilaminar epithelium | 2.81e-07 | 83 |
subcutaneous adipose tissue | 3.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.07e-09 | 5 |
myotonic disease | 8.07e-09 | 5 |
muscle tissue disease | 8.07e-09 | 5 |
myopathy | 8.07e-09 | 5 |
muscular disease | 8.07e-09 | 5 |
myotonic dystrophy | 8.07e-09 | 5 |