FFCP PHASE1:Hg19::chr4:8160596..8160605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84448 | |EntrezGene=84448 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19195 | |HGNC=19195 | ||
|TSSclassifier=strong | |||
|UniProt=F8W6D8,E7EPT1,F5GYR0,F5GZL6,E9PF39,Q6H8Q1,Q19VH0,Q08E71 | |UniProt=F8W6D8,E7EPT1,F5GYR0,F5GZL6,E9PF39,Q6H8Q1,Q19VH0,Q08E71 | ||
|association_with_transcript=-37bp_to_ENST00000296372,ENST00000318888,ENST00000400045,ENST00000428004,ENST00000502800,ENST00000545242,ENST00000546334,NM_001130083,NM_001130084,NM_001130085,NM_001130086,NM_001130087,NM_001130088,NM_032432,uc003gkj.3,uc003gkm.3,uc003gko.2,uc003gkp.2, | |association_with_transcript=-37bp_to_ENST00000296372,ENST00000318888,ENST00000400045,ENST00000428004,ENST00000502800,ENST00000545242,ENST00000546334,NM_001130083,NM_001130084,NM_001130085,NM_001130086,NM_001130087,NM_001130088,NM_032432,uc003gkj.3,uc003gkm.3,uc003gko.2,uc003gkp.2,uc | ||
|cluster_id=chr4:8160596..8160605,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_7_at_ABLIM2_5end | |description=CAGE_peak_7_at_ABLIM2_5end | ||
|id=chr4:8160596..8160605,- | |id=chr4:8160596..8160605,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.39e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001872;2.26e-36;5!UBERON:0001893;1.86e-27;34!UBERON:0000988;2.72e-27;3!UBERON:0003528;3.42e-27;34!UBERON:0002020;3.42e-27;34!UBERON:0001869;2.29e-26;32!UBERON:0001950;9.38e-24;20!UBERON:0002619;1.03e-21;22!UBERON:0002581;1.53e-21;1!UBERON:0002902;4.22e-21;1!UBERON:0001882;4.22e-21;1!UBERON:0009899;4.22e-21;1!UBERON:0007190;4.22e-21;1!UBERON:0005403;4.22e-21;1!UBERON:0000956;3.10e-19;25!UBERON:0000203;3.10e-19;25!UBERON:0002791;3.42e-19;32!UBERON:0002780;1.33e-16;41!UBERON:0001890;1.33e-16;41!UBERON:0000073;1.76e-15;53!UBERON:0002616;1.76e-15;53!UBERON:0000200;2.49e-14;6!UBERON:0002298;3.47e-14;6!UBERON:0002360;3.02e-11;2!UBERON:0002148;3.02e-11;2!UBERON:0006331;3.02e-11;2!UBERON:0009662;3.02e-11;2!UBERON:0000094;3.02e-11;2!UBERON:0010743;3.02e-11;2!UBERON:0001017;8.53e-11;75!UBERON:0002680;8.83e-10;9!UBERON:0000125;8.83e-10;9!UBERON:0002308;8.83e-10;9!UBERON:0001895;8.83e-10;9!UBERON:0001016;1.16e-09;83!UBERON:0000955;2.00e-08;68!UBERON:0004733;1.47e-07;12!UBERON:0002028;1.47e-07;12!UBERON:0004732;4.80e-07;13 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!7.75e-40!41;UBERON:0001890!7.75e-40!41;UBERON:0006240!7.75e-40!41;UBERON:0003080!1.07e-38!42;UBERON:0007023!2.22e-36!115;UBERON:0001893!2.38e-36!34;UBERON:0002020!4.14e-36!34;UBERON:0003528!4.14e-36!34;UBERON:0001049!1.42e-35!57;UBERON:0005068!1.42e-35!57;UBERON:0006241!1.42e-35!57;UBERON:0007135!1.42e-35!57;UBERON:0002791!2.70e-34!33;UBERON:0002616!4.82e-34!59;UBERON:0001869!7.33e-33!32;UBERON:0000955!3.34e-29!69;UBERON:0006238!3.34e-29!69;UBERON:0001017!3.59e-28!82;UBERON:0005743!3.84e-28!86;UBERON:0003056!4.85e-26!61;UBERON:0003075!3.19e-25!86;UBERON:0007284!3.19e-25!86;UBERON:0000073!1.79e-24!94;UBERON:0001016!1.79e-24!94;UBERON:0002346!1.22e-23!90;UBERON:0002619!2.00e-23!22;UBERON:0000956!6.80e-23!25;UBERON:0000203!6.80e-23!25;UBERON:0001950!6.13e-20!20;UBERON:0000153!1.84e-19!129;UBERON:0007811!1.84e-19!129;UBERON:0000033!1.53e-17!123;UBERON:0002308!3.02e-15!9;UBERON:0000125!3.02e-15!9;UBERON:0004121!5.85e-14!169;UBERON:0000924!2.25e-13!173;UBERON:0006601!2.25e-13!173;UBERON:0002420!7.99e-12!9;UBERON:0007245!7.99e-12!9;UBERON:0010009!7.99e-12!9;UBERON:0010011!7.99e-12!9;UBERON:0000454!7.99e-12!9;UBERON:0009663!1.90e-11!7;UBERON:0000200!2.72e-10!6;UBERON:0001872!2.72e-08!5;UBERON:0000025!4.20e-08!194;UBERON:0000477!4.63e-08!286;UBERON:0002771!7.34e-08!3;UBERON:0000988!7.68e-08!3;UBERON:0000349!8.00e-08!5;UBERON:0001871!1.93e-07!7;UBERON:0006331!2.99e-07!3;UBERON:0004111!3.80e-07!241;UBERON:0002298!4.02e-07!8;UBERON:0000064!6.25e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;2.26e-36;5!UBERON:0001893;1.86e-27;34!UBERON:0000988;2.72e-27;3!UBERON:0003528;3.42e-27;34!UBERON:0002020;3.42e-27;34!UBERON:0001869;2.29e-26;32!UBERON:0001950;9.38e-24;20!UBERON:0002619;1.03e-21;22!UBERON:0002581;1.53e-21;1!UBERON:0002902;4.22e-21;1!UBERON:0001882;4.22e-21;1!UBERON:0009899;4.22e-21;1!UBERON:0007190;4.22e-21;1!UBERON:0005403;4.22e-21;1!UBERON:0000956;3.10e-19;25!UBERON:0000203;3.10e-19;25!UBERON:0002791;3.42e-19;32!UBERON:0002780;1.33e-16;41!UBERON:0001890;1.33e-16;41!UBERON:0000073;1.76e-15;53!UBERON:0002616;1.76e-15;53!UBERON:0000200;2.49e-14;6!UBERON:0002298;3.47e-14;6!UBERON:0002360;3.02e-11;2!UBERON:0002148;3.02e-11;2!UBERON:0006331;3.02e-11;2!UBERON:0009662;3.02e-11;2!UBERON:0000094;3.02e-11;2!UBERON:0010743;3.02e-11;2!UBERON:0001017;8.53e-11;75!UBERON:0002680;8.83e-10;9!UBERON:0000125;8.83e-10;9!UBERON:0002308;8.83e-10;9!UBERON:0001895;8.83e-10;9!UBERON:0001016;1.16e-09;83!UBERON:0000955;2.00e-08;68!UBERON:0004733;1.47e-07;12!UBERON:0002028;1.47e-07;12!UBERON:0004732;4.80e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,2.00e-36,5;UBERON:0000073,2.65e-29,53;UBERON:0002616,2.65e-29,53;UBERON:0001869,3.09e-29,32;UBERON:0001049,9.51e-28,56;UBERON:0005068,9.51e-28,56;UBERON:0006241,9.51e-28,56;UBERON:0007135,9.51e-28,56;UBERON:0001893,1.46e-27,34;UBERON:0003528,1.64e-27,34;UBERON:0002020,1.64e-27,34;UBERON:0000988,3.11e-27,3;UBERON:0001950,6.74e-24,20;UBERON:0001017,2.01e-23,81;UBERON:0002780,5.87e-23,41;UBERON:0001890,5.87e-23,41;UBERON:0003080,5.87e-23,41;UBERON:0006240,5.87e-23,41;UBERON:0000955,1.51e-22,68;UBERON:0006238,1.51e-22,68;UBERON:0002619,7.64e-22,22;UBERON:0002791,1.18e-21,32;UBERON:0002581,1.53e-21,1;UBERON:0002902,1.88e-21,1;UBERON:0009899,1.88e-21,1;UBERON:0001016,4.23e-21,89;UBERON:0007190,5.16e-21,1;UBERON:0001882,6.31e-21,1;UBERON:0005403,6.31e-21,1;UBERON:0000956,2.37e-19,25;UBERON:0000203,2.37e-19,25;UBERON:0003075,5.75e-19,82;UBERON:0007284,5.75e-19,82;UBERON:0002346,4.44e-18,86;UBERON:0007023,5.86e-17,114;UBERON:0003056,1.66e-15,61;UBERON:0010371,6.45e-15,104;UBERON:0000200,2.66e-14,6;UBERON:0002298,3.71e-14,6;UBERON:0010314,1.10e-11,132;UBERON:0002360,4.09e-11,2;UBERON:0000094,4.09e-11,2;UBERON:0010743,4.09e-11,2;UBERON:0002148,4.52e-11,2;UBERON:0006331,4.52e-11,2;UBERON:0009662,4.52e-11,2;UBERON:0004121,5.90e-11,171;UBERON:0000924,5.90e-11,171;UBERON:0006601,5.90e-11,171;UBERON:0002680,9.24e-10,9;UBERON:0001895,9.24e-10,9;UBERON:0010092,9.24e-10,9;UBERON:0000125,1.15e-09,9;UBERON:0002308,1.15e-09,9;UBERON:0011216,2.87e-08,223;UBERON:0000025,6.82e-08,192;UBERON:0004733,1.52e-07,12;UBERON:0002028,1.52e-07,12;UBERON:0007277,1.52e-07,12;UBERON:0004732,4.95e-07,13 | |||
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| ||
|short_description=p7@ABLIM2 | |short_description=p7@ABLIM2 | ||
}} | }} |
Latest revision as of 22:33, 18 September 2015
Short description: | p7@ABLIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ABLIM2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -37bp_to_ENST00000296372, ENST00000318888, ENST00000400045, ENST00000428004, ENST00000502800, ENST00000545242, ENST00000546334, NM_001130083, NM_001130084, NM_001130085, NM_001130086, NM_001130087, NM_001130088, NM_032432, uc003gkj.3, uc003gkm.3, uc003gko.2, uc003gkp.2, uc |
EntrezGene: | ABLIM2 |
HGNC: | 19195 |
UniProt: | F8W6D8E7EPT1F5GYR0F5GZL6E9PF39Q6H8Q1Q19VH0Q08E71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data