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FFCP PHASE1:Hg19::chr12:6715564..6715580,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=1108
|EntrezGene=1108
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|HGNC=1919
|HGNC=1919
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=36bp_to_uc001qpn.2_5end
|association_with_transcript=36bp_to_uc001qpn.2_5end
|cluster_id=chr12:6715564..6715580,-
|coexpression_cluster_id=C17
|coexpression_cluster_id=C17
|description=CAGE_peak_13_at_CHD4_5end
|description=CAGE_peak_13_at_CHD4_5end
|id=chr12:6715564..6715580,-
|id=chr12:6715564..6715580,-
|ontology_enrichment_celltype=CL:0000775;6.77e-15;3!CL:0000094;1.59e-09;8!CL:0002620;1.10e-08;23!CL:0000081;6.21e-07;11
|ontology_enrichment_celltype=CL:0002620!9.17e-09!23;CL:0000057!2.94e-07!75;CL:0000055!3.68e-07!180
|ontology_enrichment_development=
|ontology_enrichment_celltype_v019=CL:0000775;6.77e-15;3!CL:0000094;1.59e-09;8!CL:0002620;1.10e-08;23!CL:0000081;6.21e-07;11
|ontology_enrichment_celltype_v019_2=CL:0000775,4.31e-15,3;CL:0000094,1.16e-09,8;CL:0002620,5.29e-09,23;CL:0002320,9.75e-08,361;CL:0000219,2.27e-07,386;CL:0000134,2.53e-07,354;CL:0000081,4.97e-07,11
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.97e-08,371
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|short_description=p13@CHD4
|short_description=p13@CHD4
}}
}}

Latest revision as of 00:48, 20 September 2015

Short description:p13@CHD4
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_13_at_CHD4_5end
Coexpression cluster:C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage
Association with transcript: 36bp_to_uc001qpn.2_5end
EntrezGene:CHD4
HGNC: 1919
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data