FFCP PHASE1:Hg19::chr1:160175117..160175136,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:160175117..160175136,+
|short_description=p2@PEA15
|description=CAGE_peak_2_at_PEA15_5end
|association_with_transcript=0bp_to_ENST00000360472,NM_003768,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8682 | |EntrezGene=8682 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8822 | |HGNC=8822 | ||
|TSSclassifier=strong | |||
|UniProt=Q15121,B1AKZ4 | |UniProt=Q15121,B1AKZ4 | ||
|association_with_transcript=0bp_to_ENST00000360472,NM_003768,uc001fvk.2,uc001fvl.2,uc001fvm.2_5end | |||
|cluster_id=chr1:160175117..160175136,+ | |||
|coexpression_cluster_id=C3890 | |||
|description=CAGE_peak_2_at_PEA15_5end | |||
|id=chr1:160175117..160175136,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.49e-21!180;CL:0000222!1.45e-13!119;CL:0000057!1.33e-10!75;CL:0000220!1.03e-09!246;CL:0002321!1.77e-09!248;CL:0000183!3.95e-09!59;CL:0000680!1.08e-08!57;CL:0000056!1.08e-08!57;CL:0000355!1.08e-08!57;CL:0000192!1.13e-08!42;CL:0000514!1.13e-08!42;CL:0000359!2.82e-08!32;CL:0000187!8.20e-08!54;CL:0000393!1.13e-07!60;CL:0000211!1.13e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.52e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.71e-14,121;CL:0000057,8.54e-11,76;CL:0002321,1.03e-09,250;CL:0000680,8.93e-09,58;CL:0000056,8.93e-09,58;CL:0000355,8.93e-09,58;CL:0000192,9.60e-09,43;CL:0000514,9.60e-09,43;CL:0000359,2.82e-08,32;CL:0000187,6.77e-08,55;CL:0000393,9.26e-08,61;CL:0000211,9.26e-08,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.11e-27!57;UBERON:0005068!5.11e-27!57;UBERON:0006241!5.11e-27!57;UBERON:0007135!5.11e-27!57;UBERON:0001017!2.16e-26!82;UBERON:0005743!2.43e-26!86;UBERON:0003075!1.19e-25!86;UBERON:0007284!1.19e-25!86;UBERON:0000475!4.14e-25!365;UBERON:0002616!4.51e-25!59;UBERON:0000073!6.81e-24!94;UBERON:0001016!6.81e-24!94;UBERON:0000955!9.90e-24!69;UBERON:0006238!9.90e-24!69;UBERON:0000119!1.11e-23!312;UBERON:0000483!5.73e-23!309;UBERON:0002346!6.45e-23!90;UBERON:0000025!1.13e-21!194;UBERON:0004121!4.30e-21!169;UBERON:0000033!4.14e-20!123;UBERON:0002780!9.29e-20!41;UBERON:0001890!9.29e-20!41;UBERON:0006240!9.29e-20!41;UBERON:0002020!1.54e-19!34;UBERON:0003528!1.54e-19!34;UBERON:0000924!1.66e-19!173;UBERON:0006601!1.66e-19!173;UBERON:0001893!1.77e-19!34;UBERON:0003080!4.58e-19!42;UBERON:0002791!7.49e-19!33;UBERON:0001869!1.67e-18!32;UBERON:0004111!1.70e-18!241;UBERON:0003056!6.09e-18!61;UBERON:0000153!6.58e-17!129;UBERON:0007811!6.58e-17!129;UBERON:0000477!3.27e-16!286;UBERON:0000480!4.72e-16!626;UBERON:0000467!5.19e-16!625;UBERON:0000468!1.98e-15!659;UBERON:0000956!2.90e-14!25;UBERON:0000203!2.90e-14!25;UBERON:0002619!7.54e-13!22;UBERON:0000064!4.17e-12!219;UBERON:0001950!1.42e-11!20;UBERON:0000923!4.61e-11!604;UBERON:0005291!4.61e-11!604;UBERON:0006598!4.61e-11!604;UBERON:0002532!4.61e-11!604;UBERON:0002050!4.65e-11!605;UBERON:0005423!4.65e-11!605;UBERON:0000922!7.93e-11!612;UBERON:0000481!3.84e-10!347;UBERON:0000914!6.47e-10!83;UBERON:0002329!6.47e-10!83;UBERON:0003077!6.47e-10!83;UBERON:0003059!6.47e-10!83;UBERON:0007282!6.47e-10!83;UBERON:0009618!6.47e-10!83;UBERON:0007285!6.47e-10!83;UBERON:0002049!9.16e-10!79;UBERON:0007798!9.16e-10!79;UBERON:0001637!1.73e-09!42;UBERON:0003509!1.73e-09!42;UBERON:0004572!1.73e-09!42;UBERON:0000062!3.21e-09!511;UBERON:0003076!3.71e-09!15;UBERON:0003057!3.71e-09!15;UBERON:0000486!7.19e-09!82;UBERON:0004872!9.48e-09!84;UBERON:0000055!9.82e-09!69;UBERON:0001981!1.37e-08!60;UBERON:0007500!1.37e-08!60;UBERON:0004537!1.37e-08!60;UBERON:0006965!1.37e-08!60;UBERON:0004290!1.97e-08!70;UBERON:0004732!6.23e-08!13;UBERON:0004573!8.85e-08!33;UBERON:0004571!8.85e-08!33;UBERON:0001134!1.03e-07!61;UBERON:0002036!1.03e-07!61;UBERON:0003082!1.03e-07!61;UBERON:0005256!2.24e-07!143;UBERON:0004733!2.33e-07!12;UBERON:0002028!2.33e-07!12;UBERON:0007277!2.33e-07!12;UBERON:0002385!6.15e-07!63;UBERON:0001015!6.15e-07!63;UBERON:0000383!6.15e-07!63;UBERON:0002420!6.45e-07!9;UBERON:0007245!6.45e-07!9;UBERON:0010009!6.45e-07!9;UBERON:0010011!6.45e-07!9;UBERON:0000454!6.45e-07!9;UBERON:0002308!9.11e-07!9;UBERON:0000125!9.11e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.45e-17;34!UBERON:0003528;7.16e-17;34!UBERON:0002020;7.16e-17;34!UBERON:0001869;9.43e-17;32!UBERON:0002791;1.31e-16;32!UBERON:0000073;6.55e-15;53!UBERON:0002616;6.55e-15;53!UBERON:0002780;2.79e-14;41!UBERON:0001890;2.79e-14;41!UBERON:0000956;3.09e-14;25!UBERON:0000203;3.09e-14;25!UBERON:0002619;8.05e-13;22!UBERON:0001950;1.51e-11;20!UBERON:0001017;2.27e-11;75!UBERON:0000955;3.80e-11;68!UBERON:0001016;3.19e-09;83!UBERON:0004732;6.60e-08;13!UBERON:0004733;2.48e-07;12!UBERON:0002028;2.48e-07;12!UBERON:0004573;5.01e-07;33!UBERON:0004571;5.01e-07;33!UBERON:0001637;5.34e-07;42!UBERON:0003509;5.34e-07;42!UBERON:0004572;5.34e-07;42!UBERON:0002420;6.36e-07;9!UBERON:0007245;6.36e-07;9!UBERON:0010009;6.36e-07;9!UBERON:0010011;6.36e-07;9!UBERON:0000454;6.36e-07;9!UBERON:0000125;8.98e-07;9!UBERON:0002308;8.98e-07;9 | |||
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| ||
|short_description=p2@PEA15 | |||
}} | }} |
Latest revision as of 01:18, 18 September 2015
Short description: | p2@PEA15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PEA15_5end |
Coexpression cluster: | C3890_spinal_amygdala_locus_medulla_hippocampus_optic_globus |
Association with transcript: | 0bp_to_ENST00000360472, NM_003768, uc001fvk.2, uc001fvl.2, uc001fvm.2_5end |
EntrezGene: | PEA15 |
HGNC: | 8822 |
UniProt: | Q15121B1AKZ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.71e-14 | 121 |
fibroblast | 8.54e-11 | 76 |
embryonic cell | 1.03e-09 | 250 |
muscle precursor cell | 8.93e-09 | 58 |
myoblast | 8.93e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.93e-09 | 58 |
smooth muscle cell | 9.60e-09 | 43 |
smooth muscle myoblast | 9.60e-09 | 43 |
vascular associated smooth muscle cell | 2.82e-08 | 32 |
muscle cell | 6.77e-08 | 55 |
electrically responsive cell | 9.26e-08 | 61 |
electrically active cell | 9.26e-08 | 61 |