FFCP PHASE1:Hg19::chr11:111808060..111808111,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85458 | |EntrezGene=85458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23695 | |HGNC=23695 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-32bp_to_ENST00000528399_5end | |association_with_transcript=-32bp_to_ENST00000528399_5end | ||
|cluster_id=chr11:111808060..111808111,+ | |||
|description=CAGE_peak_4_at_DIXDC1_5end | |description=CAGE_peak_4_at_DIXDC1_5end | ||
|id=chr11:111808060..111808111,+ | |id=chr11:111808060..111808111,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.95e-08!180 | |ontology_enrichment_celltype=CL:0000055!5.95e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002321;1.31e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,2.45e-07,59;CL:0000047,3.53e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;1.65e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.46e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.70e-22!94;UBERON:0001016!9.70e-22!94;UBERON:0005743!5.13e-20!86;UBERON:0001017!2.16e-18!82;UBERON:0002346!8.01e-16!90;UBERON:0003075!3.85e-14!86;UBERON:0007284!3.85e-14!86;UBERON:0000955!1.38e-13!69;UBERON:0006238!1.38e-13!69;UBERON:0000924!1.08e-12!173;UBERON:0006601!1.08e-12!173;UBERON:0002616!1.52e-11!59;UBERON:0004121!2.16e-11!169;UBERON:0001049!5.50e-11!57;UBERON:0005068!5.50e-11!57;UBERON:0006241!5.50e-11!57;UBERON:0007135!5.50e-11!57;UBERON:0000033!1.19e-10!123;UBERON:0000153!4.58e-10!129;UBERON:0007811!4.58e-10!129;UBERON:0003056!1.39e-09!61;UBERON:0000468!1.63e-08!659;UBERON:0001893!6.14e-08!34;UBERON:0001869!9.20e-08!32;UBERON:0002020!9.75e-08!34;UBERON:0003528!9.75e-08!34;UBERON:0000922!1.38e-07!612;UBERON:0002791!1.65e-07!33;UBERON:0002780!2.61e-07!41;UBERON:0001890!2.61e-07!41;UBERON:0006240!2.61e-07!41;UBERON:0000119!2.66e-07!312;UBERON:0003080!2.96e-07!42;UBERON:0000477!2.99e-07!286;UBERON:0000483!4.63e-07!309;UBERON:0000025!7.31e-07!194;UBERON:0000956!7.54e-07!25;UBERON:0000203!7.54e-07!25 | |ontology_enrichment_uberon=UBERON:0000073!9.70e-22!94;UBERON:0001016!9.70e-22!94;UBERON:0005743!5.13e-20!86;UBERON:0001017!2.16e-18!82;UBERON:0002346!8.01e-16!90;UBERON:0003075!3.85e-14!86;UBERON:0007284!3.85e-14!86;UBERON:0000955!1.38e-13!69;UBERON:0006238!1.38e-13!69;UBERON:0000924!1.08e-12!173;UBERON:0006601!1.08e-12!173;UBERON:0002616!1.52e-11!59;UBERON:0004121!2.16e-11!169;UBERON:0001049!5.50e-11!57;UBERON:0005068!5.50e-11!57;UBERON:0006241!5.50e-11!57;UBERON:0007135!5.50e-11!57;UBERON:0000033!1.19e-10!123;UBERON:0000153!4.58e-10!129;UBERON:0007811!4.58e-10!129;UBERON:0003056!1.39e-09!61;UBERON:0000468!1.63e-08!659;UBERON:0001893!6.14e-08!34;UBERON:0001869!9.20e-08!32;UBERON:0002020!9.75e-08!34;UBERON:0003528!9.75e-08!34;UBERON:0000922!1.38e-07!612;UBERON:0002791!1.65e-07!33;UBERON:0002780!2.61e-07!41;UBERON:0001890!2.61e-07!41;UBERON:0006240!2.61e-07!41;UBERON:0000119!2.66e-07!312;UBERON:0003080!2.96e-07!42;UBERON:0000477!2.99e-07!286;UBERON:0000483!4.63e-07!309;UBERON:0000025!7.31e-07!194;UBERON:0000956!7.54e-07!25;UBERON:0000203!7.54e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.02e-09;25!UBERON:0000203;3.02e-09;25!UBERON:0001869;1.67e-08;32!UBERON:0001016;3.39e-08;83!UBERON:0001893;3.50e-08;34!UBERON:0000073;7.28e-08;53!UBERON:0002616;7.28e-08;53!UBERON:0003528;7.39e-08;34!UBERON:0002020;7.39e-08;34!UBERON:0002791;9.62e-08;32!UBERON:0001017;1.29e-07;75!UBERON:0001950;1.35e-07;20!UBERON:0007625;2.54e-07;11!UBERON:0000955;2.75e-07;68!UBERON:0002619;3.15e-07;22!UBERON:0002780;9.27e-07;41!UBERON:0001890;9.27e-07;41 | |||
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|phase1_expression=0.181678379270557,0.642301571672949,0.986680828671798,1.0007329835313,0.893922188854576,0,0,1.26343974685366,1.04474251279935,1.22866968250754,0.697801167972428,0.218441372130172,0,1.23766352960047,0.662794751455832,1.34465029290355,1.20538905604795,1.46062018077475,3.41552959153355,1.35433163884467,1.22400414746552,0.626909442956176,5.43848375549008,3.96935832711364,8.913527411231,0,0,0,0,0.767658796194425,1.08371286321253,0,0.90361775633475,0.369754010166788,0,0,0.880801318004542,0,0.200544447470142,0,0,0,0,0.436194716338694,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0.962787081228281,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0,0.821127996921047,0,0,0.144824403882799,2.43806866313962,2.01210257911091,0,1.0843174571537,1.50401373190767,2.60723734129483,15.905718941022,18.4921250715002,6.14476311566441,5.09977614163897,4.56740885604255,1.0478326039817,0,0.370784442784429,0,0,0,0,0,0,2.38514888840046,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,1.6507082516404,2.08994966536811,1.55050055501597,2.13459757612026,0.66944122552934,0.805658634218294,1.52054421143703,0,1.47065232138347,4.86085168729056,2.58969212023831,4.04152870727106,3.15312145353302,6.13266549863533,1.89853131913626,2.74802615895611,0,0,0,0,0.633152558322899,0.264818361626438,0.573673241497627,0.709336764396714,1.12135520028461,0,1.2333377420858,0.933633106199299,1.21239604862719,0.653847612453835,1.51357427644931,1.72852777344,0.468642863667593,0.624320153660641,0,0.149448680551801,0.939475989150119,1.45685649931318,1.12360645361799,0.816616685019573,0.982674538494144,1.65321249881225,0,0,0,0,1.0100166837244,2.00189631795143,0.554128230968366,0.877955241761676,0,0,0.907457465280168,1.97328599257748,0.85422955527427,0.635795703478686,2.10063767259082,0.721367704669072,1.03056216018252,1.67505170698431,1.68776332241266,0.292311015483596,1.7670364197088,1.38074847963449,0.484938170456436,1.42003837006646,1.0075209822764,1.52604533079439,0.57978255948989,0,0,2.19552671033272,2.78312513475119,2.78865462886844,2.28054321033815,1.00928340350251,0.72995471815166,0,0,0,0.464367928031979,1.44375896333917,0.828147600278907,0.674338760312407,0.482022059766964,1.21323370005633,1.52515610864684,0,0.808987848960987,1.76599318612811,1.53898862778556,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.491953754172454,4.46076306776166,0.548751427043128,0,0.100528972411631,0.555530670951178,0,0,0,4.63721619900307,4.81375646366869,0.288732895522148,0.462985512576611,1.33177906564219,0,0,0,0,0.297262324577456,0,1.34385702559088,0.425325291727159,0,0,0,0.492663237895943,0,0.207328115540772,0.144119953416961,0,0.63497894292169,0.763976851116555,1.17217447210047,0,1.54241239054985,1.50171528921959,1.71495859578347,1.34557301214433,0.87192013766656,0.95339771567235,0.387815147273333,0,0.845302752556,1.32969058292435,0,1.02882949704857,1.41849132023278,1.3321108950805,0.57191197463259,0.542621605391443,1.64648067356154,1.30294473717494,0,0.791951872933429,0,0,0.399891964728228,0,0,0,0,1.14861935834114,4.27910715122155,1.59259437334337,1.2328579353023,3.04403637507822,0.112085143993527,0,0.431255149719035,0,6.60646022978405,7.8083912314573,2.31986643833309,7.53823194004569,5.10351001322531,0,0,0,1.47229790062968,1.00034104211935,0.542530047399471,0,0,0.157702415033935,0.234282829985426,0.601892199455438,0,1.03473071292505,1.99267679560631,1.29058417979192,1.39013783148933,0.391602314925481,0,0.413536052245775,0,0,0,0,0,0.744323423456331,0.61384789315225,0.561320188866147,0.256278298511402,1.02341449813341,1.93024705372329,0,0.616838775210622,0.710246901252508,0.739144404124282,0,0.813472649219715,0.241718899183244,0.40101294060657,0,0.34444334449382,0.182091168006717,0.786746489756545,0,0.770153371044148,0,0,2.84989398010764,1.13733384070897,0.340187410553031,1.29549549661284,0,1.08378575017541,1.50506932156456,1.01950509218015,0,2.0148727924996,0,0,1.53870075069834,2.29610251989794,3.57916234130733,0.618246069886334,2.28923662045859,2.88783249722058,0.574265537996172,1.30012049207304,0,1.35339005608971,1.3864375540318,1.22802939780904,0.827019434907183,3.11518710117994,2.32026710262766,1.36362603865761,1.06838442776085,0.330569830721956,0.192190067365106,0.510450849978337,0,0,1.25924938732256,0,0.616067160352178,0.532306030317022,0.869932992075073,0.55597265731176,0.715624433709956,3.72158369359667,0.949138274156178,1.14378116354295,0,1.28381696410176,0.636406495851874,0,1.43897966066652,1.64722217841633,1.17812402345686,0.202182481573316,0,0.842516912477962,0.48763373908959,0,0,0.272999822815972,0.707027159768564,2.26016233240486,2.2054613741845,0,0.438450885253763,0,0.655894752046633,0.4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| ||
|short_description=p4@DIXDC1 | |short_description=p4@DIXDC1 | ||
}} | }} |
Latest revision as of 04:26, 25 September 2015
Short description: | p4@DIXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DIXDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000528399_5end |
EntrezGene: | DIXDC1 |
HGNC: | 23695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 2.45e-07 | 59 |
neuronal stem cell | 3.53e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.41e-22 | 89 |
central nervous system | 3.81e-20 | 81 |
neurectoderm | 2.67e-18 | 86 |
neural plate | 3.90e-16 | 82 |
presumptive neural plate | 3.90e-16 | 82 |
ectoderm-derived structure | 1.03e-14 | 171 |
ectoderm | 1.03e-14 | 171 |
presumptive ectoderm | 1.03e-14 | 171 |
brain | 1.22e-14 | 68 |
future brain | 1.22e-14 | 68 |
neural tube | 9.78e-13 | 56 |
neural rod | 9.78e-13 | 56 |
future spinal cord | 9.78e-13 | 56 |
neural keel | 9.78e-13 | 56 |
regional part of nervous system | 1.41e-12 | 53 |
regional part of brain | 1.41e-12 | 53 |
pre-chordal neural plate | 3.70e-12 | 61 |
structure with developmental contribution from neural crest | 2.49e-11 | 132 |
ecto-epithelium | 3.44e-10 | 104 |
cerebral hemisphere | 7.62e-10 | 32 |
telencephalon | 1.19e-09 | 34 |
brain grey matter | 2.17e-09 | 34 |
gray matter | 2.17e-09 | 34 |
cerebral cortex | 2.20e-09 | 25 |
pallium | 2.20e-09 | 25 |
regional part of telencephalon | 9.89e-09 | 32 |
regional part of forebrain | 1.02e-08 | 41 |
forebrain | 1.02e-08 | 41 |
anterior neural tube | 1.02e-08 | 41 |
future forebrain | 1.02e-08 | 41 |
neocortex | 1.46e-07 | 20 |
pigment epithelium of eye | 2.30e-07 | 11 |
regional part of cerebral cortex | 2.42e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.46e-07 | 10 |