FFCP PHASE1:Hg19::chr2:206547027..206547034,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8828 | |EntrezGene=8828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8005 | |HGNC=8005 | ||
|TSSclassifier=strong | |||
|UniProt=E9PF66,O60462,F5H1G4,F5H2X3,Q7LBX6,Q7Z3T9,Q9H2E2,Q7LBX7 | |UniProt=E9PF66,O60462,F5H1G4,F5H2X3,Q7LBX6,Q7Z3T9,Q9H2E2,Q7LBX7 | ||
|association_with_transcript=-189bp_to_ENST00000355117,ENST00000360409,ENST00000540178,ENST00000540841,NM_003872,NM_018534,NM_201264,NM_201266,NM_201267,NM_201279,uc002vat.2,uc002vau.2,uc002vav.2,uc002vaw.2,uc002vax.2,uc002vay.2_5end | |association_with_transcript=-189bp_to_ENST00000355117,ENST00000360409,ENST00000540178,ENST00000540841,NM_003872,NM_018534,NM_201264,NM_201266,NM_201267,NM_201279,uc002vat.2,uc002vau.2,uc002vav.2,uc002vaw.2,uc002vax.2,uc002vay.2_5end | ||
|cluster_id=chr2:206547027..206547034,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_9_at_NRP2_5end | |description=CAGE_peak_9_at_NRP2_5end | ||
|id=chr2:206547027..206547034,+ | |id=chr2:206547027..206547034,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.83e-13;6!CL:0000047;2.57e-11;2!CL:0002262;1.84e-10;2!CL:1000398;1.84e-10;2!CL:0002138;1.19e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.43e-13,6;CL:0002262,1.14e-10,2;CL:1000398,1.14e-10,2;CL:0005020,1.73e-07,6;CL:0002138,1.73e-07,6;CL:0005022,1.73e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;1.19e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;8.21e-12;14!DOID:120;8.49e-08;27!DOID:193;3.38e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.53e-12,14;DOID:120,6.29e-08,27;DOID:193,2.57e-07,29 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.84e-10;2!UBERON:0003497;1.84e-10;2!UBERON:0003909;1.84e-10;2!UBERON:0003835;1.84e-10;2!UBERON:0002118;2.43e-09;5!UBERON:0001280;3.00e-07;3!UBERON:0004647;3.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.14e-10,2;UBERON:0003497,1.14e-10,2;UBERON:0003909,1.14e-10,2;UBERON:0003835,1.14e-10,2;UBERON:0002118,1.94e-09,5;UBERON:0001280,2.19e-07,3;UBERON:0004647,2.19e-07,3;UBERON:0005171,2.19e-07,3 | |||
|phase1_expression=1.09007027562334,0.214100523890983,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0,1.43117993565528,0.821246550437305,0.87879847716362,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0.398927315243264,1.70489900213078,0.290209238628584,0,0,0.502497330513487,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.289693037921647,0.795285947051099,0.973269740605272,0.661743720148475,0.665188192387692,0.175669571386252,0.261958150995425,0,0,0.649094787309367,0.348259474598534,0.398873881556595,0,0,0,0,0,0,1.13061588384802,0,0,0.626984899610432,0.258416759169329,1.06729878806013,1.33888245105868,0.402829317109147,0,0.488124115096339,0,0,0.17859945656816,0.673588117878509,0,0,0,0.183201743930407,0,0,0,0,0.506522046658319,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0.389748020644795,0,0.276149695926898,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0.928735856063958,0,0,0,0,0,0,0.237270619111097,0,0,0,1.4763109092493,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0.695582429850461,0.234817388471643,0.577465791044295,1.38895653772983,0,0,0,0,3.7440682422278,1.78357394746474,0,0,0.283550194484773,0.447792613514241,0.290633938513962,0.383382679165211,39.9057222695714,0.088048434013226,0.414656231081544,0,0.12624243342638,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,1.58390374586686,0.301439377059586,0,0.499864955910285,1.2162378064119,0,2.10833939483032,0,1.14861935834114,0,0,0,0,0,0,0,0,2.7950408664471,2.60279707715243,2.31986643833309,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0,0,0.686286847621712,0,0,0,0,0,0,0,0.920771839728375,0,0.384417447767103,0.511707249066704,0.965123526861645,0,0.462629081407967,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0.231046011313244,0.784349769176855,0,0.211103257785751,0,0.680374821106063,0,0,0.270946437543853,2.00675909541941,0,0,0.895499018888713,0,0,0.256450125116389,0,0.325378394664303,0,0.54941678891006,0.165018999841176,0.574265537996172,0,1.6068392984416,0.48335359146061,0,0,0,0.429680979473094,0.435050081742686,0.170453254832202,0.445160178233687,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.717056761020258,1.08073945114433,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,1.34060455107157,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0.16480387422676,0,0,0,0,0.409074730008619,0,0.311039587661807,0,0,0,0.295930216910801,0,2.22273980289274,0,0.185536196323703,0,0,0,0,0.341380344856499,0.762760950878299,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0.692552326534174,0.341826167541004,0,0,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0.843992258112108,0,0,0.649165919226273,0,0,0,0,0.123563938946503,0,0.202203398942031,0,0,0,0,0,0,1.20990716048664,0,0.505492637027904,0,0.414752765588989,0,0,0,0,0,0,0,0,0,0.17472666824203,2.23581842213102,0,0,0,0.290967049465258,0,0,0.274083849293502,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0.101998217636322,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0.137539436597234,0,0.449947783103001,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0.662091970365432,0,1.62899880526114,0,0.979762080328227,0,0,0.170388021785422,0.113312091520126,0,0,0.646414781807753,0.39669780522807,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0,0.221858103073705,0,0,0,1.21319294033318,0.570930667089935,0,0.468334905806882,0,0,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0,0,0.443565449968902,0.796483835818512,0,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| ||
|short_description=p9@NRP2 | |short_description=p9@NRP2 | ||
}} | }} |
Latest revision as of 17:00, 19 September 2015
Short description: | p9@NRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NRP2_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -189bp_to_ENST00000355117, ENST00000360409, ENST00000540178, ENST00000540841, NM_003872, NM_018534, NM_201264, NM_201266, NM_201267, NM_201279, uc002vat.2, uc002vau.2, uc002vav.2, uc002vaw.2, uc002vax.2, uc002vay.2_5end |
EntrezGene: | NRP2 |
HGNC: | 8005 |
UniProt: | E9PF66O60462F5H1G4F5H2X3Q7LBX6Q7Z3T9Q9H2E2Q7LBX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.43e-13 | 6 |
endothelial cell of sinusoid | 1.14e-10 | 2 |
endothelial cell of hepatic sinusoid | 1.14e-10 | 2 |
lymphangioblast | 1.73e-07 | 6 |
endothelial cell of lymphatic vessel | 1.73e-07 | 6 |
vascular lymphangioblast | 1.73e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.14e-10 | 2 |
abdomen blood vessel | 1.14e-10 | 2 |
sinusoid | 1.14e-10 | 2 |
abdominal segment blood vessel | 1.14e-10 | 2 |
right ovary | 1.94e-09 | 5 |
liver parenchyma | 2.19e-07 | 3 |
liver lobule | 2.19e-07 | 3 |
hepatic duct | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.53e-12 | 14 |
female reproductive organ cancer | 6.29e-08 | 27 |
reproductive organ cancer | 2.57e-07 | 29 |