FFCP PHASE1:Hg19::chr11:64546565..64546600,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7536 | |EntrezGene=7536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12950 | |HGNC=12950 | ||
|TSSclassifier=strong | |||
|UniProt=Q15637 | |UniProt=Q15637 | ||
|association_with_transcript=-249bp_to_NM_004630,NM_201995,NM_201997,NM_201998,NR_033649,NR_033650_5end | |association_with_transcript=-249bp_to_NM_004630,NM_201995,NM_201997,NM_201998,NR_033649,NR_033650_5end | ||
|cluster_id=chr11:64546565..64546600,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_28_at_SF1_5end | |description=CAGE_peak_28_at_SF1_5end | ||
|id=chr11:64546565..64546600,- | |id=chr11:64546565..64546600,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.23e-21;3!CL:0000094;6.26e-18;8!CL:0000081;3.20e-13;11!CL:0000771;6.67e-09;2!CL:0002363;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.17e-21,3;CL:0000094,4.97e-18,8;CL:0000081,2.71e-13,11;CL:0000771,5.08e-09,2;CL:0002363,8.74e-09,2;CL:0000008,8.74e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.78e-16;1!CL:0000008;6.67e-09;2!UBERON:0007297;6.67e-09;2!UBERON:0009117;3.33e-07;10!UBERON:0005564;3.33e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-08!115 | |ontology_enrichment_uberon=UBERON:0007023!1.22e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.04e-31;2!UBERON:0000473;4.82e-18;8!UBERON:0000998;1.78e-16;1!UBERON:0006868;1.78e-16;1!UBERON:0003296;4.18e-16;4!UBERON:0010133;4.18e-16;4!UBERON:0003135;2.66e-13;11!UBERON:0001894;1.29e-09;7!UBERON:0003566;6.67e-09;2!UBERON:0001777;6.67e-09;2!UBERON:0000991;3.11e-07;21!UBERON:0003101;6.29e-07;22!UBERON:0000079;6.29e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.71e-31,2;UBERON:0000473,4.18e-18,8;UBERON:0000998,1.21e-16,1;UBERON:0006868,1.21e-16,1;UBERON:0003296,4.51e-16,4;UBERON:0010133,4.51e-16,4;UBERON:0003135,2.39e-13,11;UBERON:0001894,1.35e-09,7;UBERON:0006222,1.35e-09,7;UBERON:0003566,8.74e-09,2;UBERON:0001777,8.74e-09,2;UBERON:0000991,2.95e-07,21;UBERON:0009196,2.95e-07,21;UBERON:0009117,2.95e-07,21;UBERON:0005564,2.95e-07,21;UBERON:0004176,5.98e-07,22;UBERON:0003101,5.98e-07,22;UBERON:0000079,5.98e-07,22 | |||
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| ||
|short_description=p28@SF1 | |short_description=p28@SF1 | ||
}} | }} |
Latest revision as of 04:34, 19 September 2015
Short description: | p28@SF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_SF1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -249bp_to_NM_004630, NM_201995, NM_201997, NM_201998, NR_033649, NR_033650_5end |
EntrezGene: | SF1 |
HGNC: | 12950 |
UniProt: | Q15637 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.17e-21 | 3 |
granulocyte | 4.97e-18 | 8 |
blood cell | 2.71e-13 | 11 |
eosinophil | 5.08e-09 | 2 |
keratocyte | 8.74e-09 | 2 |
migratory cranial neural crest cell | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.71e-31 | 2 |
testis | 4.18e-18 | 8 |
seminal vesicle | 1.21e-16 | 1 |
seminal fluid secreting gland | 1.21e-16 | 1 |
gland of diencephalon | 4.51e-16 | 4 |
neuroendocrine gland | 4.51e-16 | 4 |
male reproductive organ | 2.39e-13 | 11 |
diencephalon | 1.35e-09 | 7 |
future diencephalon | 1.35e-09 | 7 |
head connective tissue | 8.74e-09 | 2 |
substantia propria of cornea | 8.74e-09 | 2 |
gonad | 2.95e-07 | 21 |
indifferent external genitalia | 2.95e-07 | 21 |
indifferent gonad | 2.95e-07 | 21 |
gonad primordium | 2.95e-07 | 21 |
external genitalia | 5.98e-07 | 22 |
male organism | 5.98e-07 | 22 |
male reproductive system | 5.98e-07 | 22 |