FFCP PHASE1:Hg19::chr12:95211919..95211930,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:95211919..95211930,- | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_at_chr12:95211919..95211930,- | |description=CAGE_peak_at_chr12:95211919..95211930,- | ||
|id=chr12:95211919..95211930,- | |id=chr12:95211919..95211930,- | ||
|ontology_enrichment_celltype=CL:0000945!2.74e-32!24;CL:0000826!2.74e-32!24;CL:0000451!2.00e-19!10;CL:0000236!1.11e-14!14;CL:0000990!1.63e-14!8;CL:0000542!1.50e-13!53;CL:0000051!1.50e-13!53;CL:0000838!3.12e-12!52;CL:0000453!6.07e-10!5;CL:0000784!2.58e-09!3;CL:0000738!2.80e-09!140;CL:0000840!2.79e-07!5;CL:0001029!2.79e-07!5 | |ontology_enrichment_celltype=CL:0000945!2.74e-32!24;CL:0000826!2.74e-32!24;CL:0000451!2.00e-19!10;CL:0000236!1.11e-14!14;CL:0000990!1.63e-14!8;CL:0000542!1.50e-13!53;CL:0000051!1.50e-13!53;CL:0000838!3.12e-12!52;CL:0000453!6.07e-10!5;CL:0000784!2.58e-09!3;CL:0000738!2.80e-09!140;CL:0000840!2.79e-07!5;CL:0001029!2.79e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.27e-36;5!CL:0000451;1.64e-36;10!CL:0000945;7.41e-36;24!CL:0000236;6.36e-21;13!CL:0000990;1.64e-20;8!CL:0000784;8.12e-16;3!CL:0000542;7.22e-11;53!CL:0001014;6.24e-07;2!CL:0001016;6.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.21e-36,5;CL:0000451,2.09e-36,10;CL:0000945,4.91e-36,24;CL:0000826,4.91e-36,24;CL:0000990,1.60e-20,8;CL:0000236,1.63e-19,14;CL:0000542,1.77e-19,53;CL:0000051,1.77e-19,53;CL:0000738,1.19e-18,136;CL:0000838,4.38e-16,52;CL:0000784,1.14e-15,3;CL:0000037,1.03e-14,168;CL:0000988,7.35e-14,177;CL:0002032,1.66e-11,161;CL:0000837,1.66e-11,161;CL:0002087,3.51e-08,115;CL:0002031,8.28e-08,120;CL:0001014,6.07e-07,2;CL:0001016,6.07e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;7.22e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;1.05e-12;1!DOID:0050177;1.05e-12;1!DOID:0050427;1.05e-12;1!DOID:12603;2.75e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,9.92e-13,1;DOID:0050177,9.92e-13,1;DOID:0050427,9.92e-13,1;DOID:12603,2.46e-12,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002038;2.75e-12;1!UBERON:0009661;2.75e-12;1!UBERON:0002950;2.75e-12;1!UBERON:0001891;2.75e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.81e-12,1;UBERON:0009661,4.81e-12,1;UBERON:0002950,4.81e-12,1;UBERON:0001891,4.81e-12,1;UBERON:0009616,4.81e-12,1;UBERON:0010286,4.81e-12,1 | |||
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| ||
|short_description=p@chr12:95211919..95211930,- | |short_description=p@chr12:95211919..95211930,- | ||
}} | }} |
Latest revision as of 13:47, 24 July 2015
Short description: | p@chr12:95211919..95211930, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:95211919..95211930, - |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.21e-36 | 5 |
dendritic cell | 2.09e-36 | 10 |
lymphocyte of B lineage | 4.91e-36 | 24 |
pro-B cell | 4.91e-36 | 24 |
conventional dendritic cell | 1.60e-20 | 8 |
B cell | 1.63e-19 | 14 |
lymphocyte | 1.77e-19 | 53 |
common lymphoid progenitor | 1.77e-19 | 53 |
leukocyte | 1.19e-18 | 136 |
lymphoid lineage restricted progenitor cell | 4.38e-16 | 52 |
plasmacytoid dendritic cell | 1.14e-15 | 3 |
hematopoietic stem cell | 1.03e-14 | 168 |
hematopoietic cell | 7.35e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.66e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-11 | 161 |
nongranular leukocyte | 3.51e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.28e-08 | 120 |
CD1a-positive Langerhans cell | 6.07e-07 | 2 |
immature CD1a-positive Langerhans cell | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 4.81e-12 | 1 |
midbrain nucleus | 4.81e-12 | 1 |
regional part of midbrain | 4.81e-12 | 1 |
midbrain | 4.81e-12 | 1 |
presumptive midbrain | 4.81e-12 | 1 |
midbrain neural tube | 4.81e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 9.92e-13 | 1 |
monogenic disease | 9.92e-13 | 1 |
xeroderma pigmentosum | 9.92e-13 | 1 |
acute leukemia | 2.46e-12 | 1 |