FFCP PHASE1:Hg19::chr1:1850504..1850518,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:1850504..1850518,-
|short_description=p3@TMEM52
|description=CAGE_peak_3_at_TMEM52_5end
|association_with_transcript=-268bp_to_ENST00000378602,uc001aii.2_5...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=339456 | |EntrezGene=339456 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27916 | |HGNC=27916 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-268bp_to_ENST00000378602,uc001aii.2_5end | |||
|cluster_id=chr1:1850504..1850518,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_3_at_TMEM52_5end | |||
|id=chr1:1850504..1850518,- | |||
|ontology_enrichment_celltype=CL:0000039!8.40e-09!7;CL:0000586!8.40e-09!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.59e-12;2!UBERON:0010056;2.59e-12;2!UBERON:0003104;5.95e-07;31 | |||
|ontology_enrichment_disease=DOID:1325!7.71e-09!7;DOID:3904!7.71e-09!7;DOID:0050687!1.40e-08!143;DOID:305!3.61e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!7.01e-07!2;UBERON:0005090!7.01e-07!2;UBERON:0000341!9.22e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;1.71e-44;2!UBERON:0001630;1.71e-44;2!UBERON:0001723;3.34e-30;3!UBERON:0001033;3.34e-30;3!UBERON:0002426;2.34e-23;1!UBERON:0003831;2.34e-23;1!UBERON:0003898;2.34e-23;1!UBERON:0004830;2.34e-23;1!UBERON:0003830;2.34e-23;1!UBERON:0005175;2.34e-23;1!UBERON:0001774;2.34e-23;1!UBERON:0001103;2.34e-23;1!UBERON:0001389;5.13e-23;1!UBERON:0000026;5.13e-23;1!UBERON:0008784;5.13e-23;1!UBERON:0006058;5.13e-23;1!UBERON:0003663;5.13e-23;1!UBERON:0004256;5.13e-23;1!UBERON:0004708;5.13e-23;1!UBERON:0002101;5.13e-23;1!UBERON:0004709;5.13e-23;1!UBERON:0002529;5.13e-23;1!UBERON:0010538;5.13e-23;1!UBERON:0003661;5.13e-23;1!UBERON:0010890;5.13e-23;1!UBERON:0002471;5.13e-23;1!UBERON:0001383;5.13e-23;1!UBERON:0010758;5.13e-23;1!UBERON:0010707;5.13e-23;1!UBERON:0000978;5.13e-23;1!UBERON:0002103;5.13e-23;1!UBERON:0001665;5.13e-23;1!UBERON:0003823;5.13e-23;1!UBERON:0000154;5.13e-23;1!UBERON:0010709;5.13e-23;1!UBERON:0001134;1.67e-22;16!UBERON:0002036;1.67e-22;16!UBERON:0002385;3.19e-12;31!UBERON:0001015;3.19e-12;31!UBERON:0000383;3.19e-12;31!UBERON:0000341;3.24e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,1.22e-44,2;UBERON:0001630,1.22e-44,2;UBERON:0001723,3.59e-30,3;UBERON:0001033,3.59e-30,3;UBERON:0010056,3.59e-30,3;UBERON:0002426,2.10e-23,1;UBERON:0003831,2.10e-23,1;UBERON:0003898,2.10e-23,1;UBERON:0004830,2.10e-23,1;UBERON:0003830,2.10e-23,1;UBERON:0005175,2.10e-23,1;UBERON:0001774,2.10e-23,1;UBERON:0001103,2.10e-23,1;UBERON:0010084,2.10e-23,1;UBERON:0005418,4.10e-23,1;UBERON:0001389,4.10e-23,1;UBERON:0000026,4.10e-23,1;UBERON:0008784,4.10e-23,1;UBERON:0006058,4.10e-23,1;UBERON:0003663,4.10e-23,1;UBERON:0004256,4.10e-23,1;UBERON:0004708,4.10e-23,1;UBERON:0002101,4.10e-23,1;UBERON:0004709,4.10e-23,1;UBERON:0002529,4.10e-23,1;UBERON:0010538,4.10e-23,1;UBERON:0003661,4.10e-23,1;UBERON:0010890,4.10e-23,1;UBERON:0002471,4.10e-23,1;UBERON:0001383,4.10e-23,1;UBERON:0004357,4.10e-23,1;UBERON:0004347,4.10e-23,1;UBERON:0005420,4.10e-23,1;UBERON:0005732,4.10e-23,1;UBERON:0010758,4.10e-23,1;UBERON:0010707,4.10e-23,1;UBERON:0000978,4.10e-23,1;UBERON:0002103,4.10e-23,1;UBERON:0001665,4.10e-23,1;UBERON:0003823,4.10e-23,1;UBERON:0000154,4.10e-23,1;UBERON:0010709,4.10e-23,1;UBERON:0005733,4.10e-23,1;UBERON:0005730,4.10e-23,1;UBERON:0000341,3.24e-12,2;UBERON:0001042,8.84e-10,10;UBERON:0009145,8.84e-10,10;UBERON:0006562,5.64e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.530119073285941,0.232387885739037,0,0,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0.254253650292766,0.236387681767936,1.03423011972439,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.359030577639089,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0.19566461893209,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.472699093843342,0.247247575143499,0.337017719270924,0,0,0,0,0.160753148465019,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,4.68908406739856,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0.280272163313789,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.392600934460972,0,1.94228651156368,7.69971051421853,6.95888658802919,0.971421986118279,0,0.198950775161368,0.594600453887843,0.22589216407792,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0.546327859818478,0,0.203977659483963,0.26721740526556,0,0,0.606229585745915,0,0,0,0.639701945702943,1.1903221573187,0,0,0,0.0636471582781649,0.202117188958219,2.17716747896961,3.08009970976753,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.530119073285941,0.232387885739037,0,0,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0.254253650292766,0.236387681767936,1.03423011972439,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.359030577639089,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0.19566461893209,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.472699093843342,0.247247575143499,0.337017719270924,0,0,0,0,0.160753148465019,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,4.68908406739856,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0.280272163313789,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.392600934460972,0,1.94228651156368,7.69971051421853,6.95888658802919,0.971421986118279,0,0.198950775161368,0.594600453887843,0.22589216407792,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0.546327859818478,0,0.203977659483963,0.26721740526556,0,0,0.606229585745915,0,0,0,0.639701945702943,1.1903221573187,0,0,0,0.0636471582781649,0.202117188958219,2.17716747896961,3.08009970976753,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p3@TMEM52 | |||
}} | }} |
Latest revision as of 05:55, 19 September 2015
Short description: | p3@TMEM52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM52_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -268bp_to_ENST00000378602, uc001aii.2_5end |
EntrezGene: | TMEM52 |
HGNC: | 27916 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data