FFCP PHASE1:Hg19::chr10:88718314..88718388,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6623 | |EntrezGene=6623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11141 | |HGNC=11141 | ||
|TSSclassifier=strong | |||
|UniProt=F8W754 | |UniProt=F8W754 | ||
|association_with_transcript=0bp_to_ENST00000348795,ENST00000465679_5end | |association_with_transcript=0bp_to_ENST00000348795,ENST00000465679_5end | ||
|cluster_id=chr10:88718314..88718388,+ | |||
|coexpression_cluster_id=C3054 | |coexpression_cluster_id=C3054 | ||
|description=CAGE_peak_1_at_SNCG_5end | |description=CAGE_peak_1_at_SNCG_5end | ||
|id=chr10:88718314..88718388,+ | |id=chr10:88718314..88718388,+ | ||
|ontology_enrichment_celltype=CL:0002139!3.04e-10!24;CL:0000115!4.60e-09!35;CL:0000071!5.01e-08!18;CL:0002546!5.01e-08!18;CL:0002078!1.12e-07!44;CL:0000222!4.75e-07!119 | |ontology_enrichment_celltype=CL:0002139!3.04e-10!24;CL:0000115!4.60e-09!35;CL:0000071!5.01e-08!18;CL:0002546!5.01e-08!18;CL:0002078!1.12e-07!44;CL:0000222!4.75e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.63e-10;24!CL:0000115;2.70e-08;36!CL:0000071;3.22e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.53e-10,24;CL:0000115,6.30e-10,36;CL:0000071,3.00e-08,18;CL:0002546,3.00e-08,18;CL:0002078,3.74e-08,45;CL:0000222,6.37e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;3.22e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;2.28e-12;34!UBERON:0002020;2.28e-12;34!UBERON:0001893;2.66e-12;34!UBERON:0001869;3.43e-12;32!UBERON:0002619;5.06e-12;22!UBERON:0002791;6.98e-12;32!UBERON:0000073;8.32e-12;53!UBERON:0002616;8.32e-12;53!UBERON:0002780;3.26e-11;41!UBERON:0001890;3.26e-11;41!UBERON:0001950;9.87e-11;20!UBERON:0000956;4.74e-10;25!UBERON:0000203;4.74e-10;25!UBERON:0007023;2.00e-09;114!UBERON:0004638;3.22e-08;18!UBERON:0001986;3.22e-08;18!UBERON:0004852;3.22e-08;18!UBERON:0000487;5.30e-08;22!UBERON:0006914;7.19e-08;25!UBERON:0000955;1.56e-07;68!UBERON:0001017;2.12e-07;75!UBERON:0004732;4.15e-07;13 | |||
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|phase1_expression=2.18014055124668,14.9870366723688,4.22863212287913,5.00366491765652,4.46961094427288,6.10636966870258,2.53299878168311,5.68547886084148,2.35067065379855,9.09215565055583,13.9560233594486,0,0,11.2627381193642,13.2558950291166,4.70627602516243,0,0.730310090387373,1.95173119516203,10.9577741688341,11.2200380184339,4.07491137921514,2.28988789704845,1.50561867580173,0.753255837568817,0,0,0,0,0,0,11.0330546937471,5.12050061923025,15.5296684270051,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,12.1079900526674,0,0.316462387440884,0,0.425208599930087,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.2659225679093,54.9974704956982,4.60305222636709,11.2046137239216,33.0883021019687,49.6823560035625,2.3858578411533,15.5723158496843,3.30871860074237,6.65188192387692,5.18225235589444,28.7499070717479,23.6791937390152,46.7188397908381,0,0,0,0,0,0,17.6898542556368,45.5924335406246,40.9625791896961,73.4900324501212,55.7934250159175,28.8873944037071,35.5291443112578,57.6269372947603,65.8167585970414,19.0790749275862,70.0923011769916,301.828025970249,76.1473619550289,28.6777202669778,63.1910719347772,23.0393298972926,36.5982877380657,35.9230622741798,45.994991239765,60.7530022123603,27.6634633334915,0,0,17.0076680335588,2.98183171017191,5.44511200157693,1.45650098894541,2.29469296599051,4.61068896857864,2.24271040056923,10.6748995729705,5.42668606517752,11.5148083097914,16.0305699762929,17.6538855362535,2.4217188423189,4.60940739583999,3.98346434117454,21.5390453012921,15.4027391817001,20.0261231939413,1.05691048779388,0,0.140450806702248,3.67477508258808,4.66770405784718,6.92282733877629,0,0.247266929278557,29.1251635820168,45.272942934423,1.68336113954066,1.62654075833553,1.6623846929051,3.07284334616587,0.30648779579902,3.15499923703853,11.2297861328421,2.87023417102179,1.92201649936711,4.4505699243508,2.10063767259082,5.35873152039882,1.54584324027377,3.53622027030021,0.337552664482532,0.974370051611986,2.52433774244115,1.28869858099219,2.90962902273861,4.61512470271599,7.2541510723901,3.39121184620975,39.4252140453126,15.2737827530867,20.9367354633973,5.12289565744301,3.5783037446801,7.08783051504062,27.5738406340885,6.05570042101508,12.774207567654,3.12899064659632,6.43240938192885,16.5761905622977,0,0.721879481669586,82.6964532278509,92.0472407826435,75.9184744132968,83.4925373584222,81.9226709787447,79.4856574022174,98.2920236487599,114.789557098327,102.34274374774,53.1471927329747,28.0483547606892,16.0513864419246,22.0513067078313,0,0,19.4960669204863,0,0.983907508344908,8.40682270462775,4.82901255797952,4.49607013030478,1.00528972411631,4.90718759340207,1.3032332212413,8.31947828223663,12.9898207822746,4.05756417412769,2.46558257895225,43.8874001193664,57.4102035594997,49.6563337332301,0,0,0,0,0,38.4308719345786,34.4363362807662,22.4004653642971,25.7032960157175,45.920162285206,41.788712029008,0,0,0.414656231081544,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,4.14885012077835,1.74384027533312,3.3735611477637,0.387815147273333,343.350188017807,11.834238535784,0.531876233169741,1.04007436911366,19.0333456953985,15.6034045225606,10.9233093396601,3.0025378668211,20.0769993994834,4.11620168390384,7.81766842304964,2.48774364119782,2.37585561880029,4.22015127883421,5.22920075160176,1.59956785891291,0,0,0,0,0,1.42636905040718,5.79125226670317,7.3971476118138,0.358121926479791,0,0,0,0,1.27047312111232,0,0,0.335032530668698,0,0,0,0,4.66227668532732,34.011595432058,3.52644530809656,1.45579603071565,0.713715955188647,0.157702415033935,0.702848489956279,1.20378439891088,0,1.03473071292505,0,2.58116835958384,1.82455590382974,19.1885134313486,7.20601190002797,0,0,0,0,1.66435439510497,1.20956117331872,2.23297027036899,1.07423381301644,0.841980283299221,2.17836553734692,4.09365799253363,1.44768529029247,10.3892646511494,3.54682295746108,9.23320971628261,5.25613798488379,10.3850885836724,16.6180841197742,0.241718899183244,20.0506470303285,18.6003597650511,0.34444334449382,0.546273504020151,3.40923478894503,3.60959690325929,6.2382423054576,7.84349769176855,7.30696123266303,4.11651352682215,45.4933536283586,49.4972682354661,13.3867867983326,21.5918153766405,8.12839312631558,10.5354852509519,4.58777291481069,9.14183609821597,14.1041095474972,0,0,18.46440900838,6.23227826829441,2.27764876265012,9.68585509488589,0,0,2.87132768998086,4.55042172225565,17.6752322828576,3.19013370364003,11.0915004322544,9.21022048356777,2.61889487720608,12.9978496290611,12.3264189827094,4.00565148855674,0.979352392114111,21.4870389969272,26.1378491616544,11.9955949744909,10.5204092089772,6.507837690162,2.20368642781448,9.0614845120878,5.85263802334569,19.6953231217298,13.0489948811261,12.4167226799626,7.01311945035757,0.744316738719335,1.89827654831236,4.95638504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| ||
|short_description=p1@SNCG | |short_description=p1@SNCG | ||
}} | }} |
Latest revision as of 18:10, 19 September 2015
Short description: | p1@SNCG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNCG_5end |
Coexpression cluster: | C3054_mature_locus_thalamus_pons_amygdala_diencephalon_hippocampus |
Association with transcript: | 0bp_to_ENST00000348795, ENST00000465679_5end |
EntrezGene: | SNCG |
HGNC: | 11141 |
UniProt: | F8W754 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.53e-10 | 24 |
endothelial cell | 6.30e-10 | 36 |
blood vessel endothelial cell | 3.00e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.00e-08 | 18 |
meso-epithelial cell | 3.74e-08 | 45 |
mesodermal cell | 6.37e-07 | 121 |