FFCP PHASE1:Hg19::chr15:39874927..39874939,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39874927..39874939,+ | |||
|coexpression_cluster_id=C142 | |coexpression_cluster_id=C142 | ||
|description=CAGE_peak_at_chr15:39874927..39874939,+ | |description=CAGE_peak_at_chr15:39874927..39874939,+ | ||
|id=chr15:39874927..39874939,+ | |id=chr15:39874927..39874939,+ | ||
|ontology_enrichment_celltype=CL:0002371!2.50e-13!591;CL:0000057!2.79e-11!75;CL:0000144!4.23e-11!625;CL:0000548!6.14e-10!679;CL:0000004!6.14e-10!679;CL:0000255!6.14e-10!679;CL:0000012!1.17e-09!682;CL:0000055!2.23e-09!180;CL:0000222!4.01e-07!119;CL:0002620!4.09e-07!23;CL:0000063!6.30e-07!578;CL:0000723!6.86e-07!436;CL:0000048!7.64e-07!430;CL:0002334!7.97e-07!12 | |ontology_enrichment_celltype=CL:0002371!2.50e-13!591;CL:0000057!2.79e-11!75;CL:0000144!4.23e-11!625;CL:0000548!6.14e-10!679;CL:0000004!6.14e-10!679;CL:0000255!6.14e-10!679;CL:0000012!1.17e-09!682;CL:0000055!2.23e-09!180;CL:0000222!4.01e-07!119;CL:0002620!4.09e-07!23;CL:0000063!6.30e-07!578;CL:0000723!6.86e-07!436;CL:0000048!7.64e-07!430;CL:0002334!7.97e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002559;1.14e-15;5!CL:0000346;4.36e-10;3!CL:1000428;4.36e-10;3!CL:0002617;1.88e-07;2!CL:0002561;2.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,4.91e-16,5;CL:0000346,1.98e-10,3;CL:1000428,1.98e-10,3;CL:0000057,8.83e-10,76;CL:0002617,2.22e-07,2;CL:0002561,2.68e-07,2;CL:0000048,4.45e-07,427;CL:0000723,7.98e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001981!1.76e-11!60;UBERON:0007500!1.76e-11!60;UBERON:0004537!1.76e-11!60;UBERON:0006965!1.76e-11!60;UBERON:0000055!3.53e-11!69;UBERON:0004872!2.14e-10!84;UBERON:0002049!1.26e-09!79;UBERON:0007798!1.26e-09!79;UBERON:0001637!4.98e-09!42;UBERON:0003509!4.98e-09!42;UBERON:0004572!4.98e-09!42;UBERON:0005631!2.26e-08!14;UBERON:0000158!2.26e-08!14;UBERON:0002097!3.43e-08!40;UBERON:0002199!5.56e-08!45;UBERON:0002416!5.56e-08!45;UBERON:0004923!3.33e-07!57;UBERON:0004535!5.68e-07!110;UBERON:0000305!5.96e-07!7 | |ontology_enrichment_uberon=UBERON:0001981!1.76e-11!60;UBERON:0007500!1.76e-11!60;UBERON:0004537!1.76e-11!60;UBERON:0006965!1.76e-11!60;UBERON:0000055!3.53e-11!69;UBERON:0004872!2.14e-10!84;UBERON:0002049!1.26e-09!79;UBERON:0007798!1.26e-09!79;UBERON:0001637!4.98e-09!42;UBERON:0003509!4.98e-09!42;UBERON:0004572!4.98e-09!42;UBERON:0005631!2.26e-08!14;UBERON:0000158!2.26e-08!14;UBERON:0002097!3.43e-08!40;UBERON:0002199!5.56e-08!45;UBERON:0002416!5.56e-08!45;UBERON:0004923!3.33e-07!57;UBERON:0004535!5.68e-07!110;UBERON:0000305!5.96e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.14e-15;5!UBERON:0000412;4.36e-10;3!UBERON:0001992;4.36e-10;3!UBERON:0003688;1.67e-08;6!UBERON:0002358;1.67e-08;6!UBERON:0003684;1.67e-08;6!UBERON:0001178;1.67e-08;6!UBERON:0005406;1.62e-07;2!UBERON:0005631;2.05e-07;10!UBERON:0000158;2.05e-07;10!UBERON:0005933;2.83e-07;2!UBERON:0005942;2.83e-07;2!UBERON:0005932;2.83e-07;2!UBERON:0002097;3.30e-07;41!UBERON:0001637;8.43e-07;42!UBERON:0003509;8.43e-07;42!UBERON:0004572;8.43e-07;42!UBERON:0002199;8.67e-07;46!UBERON:0002416;8.67e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,4.91e-16,5;UBERON:0005086,4.91e-16,5;UBERON:0000412,1.98e-10,3;UBERON:0001992,1.98e-10,3;UBERON:0002097,5.25e-10,41;UBERON:0002199,1.32e-08,46;UBERON:0002416,1.32e-08,46;UBERON:0003688,2.04e-08,6;UBERON:0002358,2.04e-08,6;UBERON:0003684,2.04e-08,6;UBERON:0001178,2.04e-08,6;UBERON:0001637,4.97e-08,42;UBERON:0003509,4.97e-08,42;UBERON:0004572,4.97e-08,42;UBERON:0005406,1.46e-07,2;UBERON:0005933,2.68e-07,2;UBERON:0005942,2.68e-07,2;UBERON:0005932,2.68e-07,2;UBERON:0004923,7.21e-07,66 | |||
|phase1_expression=1.2717486548939,4.49611100171065,0.422863212287913,6.00439790118782,1.34088328328186,8.72338524100369,0,0,0,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,0,0.331397375727916,8.0679017574213,4.82155622419182,3.65155045193687,0.975865597581014,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,1.00272223735071,0,0,0,0,0.726991193897824,0,0,1.62700325833979,0,0,0.863077176966451,0.512321413058201,0,0.344745680736619,0,0,1.12945403725563,0,0,3.97909060082173,0,0,0.659702600373432,0,0,2.61188314765726,0,0,1.7587406567972,1.0429658368404,0,1.81619850790011,0,0.316462387440884,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,1.37559020970034,1.67195973229448,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0.735326160691737,1.62028389576352,0.267899184852239,0,0.225222960966644,0,0,0.549605231791222,0,0,0,1.98788780678127,1.13967460498122,1.19168262731897,0,0,0,0,1.48000529050296,0,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.245668634623536,0.206651562351531,0,1.48360157567134,0,0,0,0,0.554128230968366,0,1.83892677479412,1.50238058906597,0.340296549480063,1.07633781413317,1.06778694409284,0.211931901159562,0.300091096084402,0.309157587715317,1.8034837803194,0.744467425326359,1.85653965465393,2.14361411354637,0.504867548488229,0.644349290496095,3.23292113637624,2.84007674013291,0.604512589365842,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,1.56449532329816,1.92972281457866,4.14404764057442,1.39310378409594,2.88751792667834,0.118306800039844,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0.866198686566443,0.462985512576611,2.47330397904978,0.790204397959275,0,0,0,0,0,1.17587489739202,0.283550194484773,0.0895585227028483,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0.514137463516618,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49565033836969,8.56459146226377,2.83864347061082,0.819989904948992,0.300946099727719,0,0,0,0,0.347534457872331,0,0,0,0,0.213455115606889,0,0,0.30239029332968,0.248107807818777,3.99001130548962,4.2099014164961,0.128139149255701,1.02341449813341,1.76939313257968,1.48418066444991,0.462629081407967,0.177561725313127,0,0,0.116210378459959,0,0.601519410909855,0.0920809889358963,0.229628896329213,0,0.393373244878272,0,0,0,0,0,0,0.680374821106063,0.647747748306418,1.54227252690289,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0,0,0.384380134730212,0.382838137483752,0,0,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0.316379424718726,0,0,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,1.26377536871694,0,0,2.11300293513511,0,0.282810863907425,0,0,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0.6196469961995,1.40847801266121,0.143411352204052,0.294747123039363,1.426684205925,0,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0,3.26672954583968,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0.593929361665277,1.53580351049616,0,0,0.222617410045812,0,0,0,0,0,0,0,1.55519793830904,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5950057986596,1.19076871422421,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0.233713309847224,0,0,0.50313580350515,0,0,0.302461847526478,0.15543720058278,0,0,0,0.310525913752519,0,0,0.521745061811734,0,0,0,0.363697318405119,0.214821114084977,2.32016879939247,3.58286299828754,1.60011105865261,0.686791410365586,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0.762764190934334,0,0.198916222116275,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,1.18948980281472,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,1.11598505450025,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=1.2717486548939,4.49611100171065,0.422863212287913,6.00439790118782,1.34088328328186,8.72338524100369,0,0,0,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,0,0.331397375727916,8.0679017574213,4.82155622419182,3.65155045193687,0.975865597581014,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,1.00272223735071,0,0,0,0,0.726991193897824,0,0,1.62700325833979,0,0,0.863077176966451,0.512321413058201,0,0.344745680736619,0,0,1.12945403725563,0,0,3.97909060082173,0,0,0.659702600373432,0,0,2.61188314765726,0,0,1.7587406567972,1.0429658368404,0,1.81619850790011,0,0.316462387440884,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,1.37559020970034,1.67195973229448,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0.735326160691737,1.62028389576352,0.267899184852239,0,0.225222960966644,0,0,0.549605231791222,0,0,0,1.98788780678127,1.13967460498122,1.19168262731897,0,0,0,0,1.48000529050296,0,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.245668634623536,0.206651562351531,0,1.48360157567134,0,0,0,0,0.554128230968366,0,1.83892677479412,1.50238058906597,0.340296549480063,1.07633781413317,1.06778694409284,0.211931901159562,0.300091096084402,0.309157587715317,1.8034837803194,0.744467425326359,1.85653965465393,2.14361411354637,0.504867548488229,0.644349290496095,3.23292113637624,2.84007674013291,0.604512589365842,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,1.56449532329816,1.92972281457866,4.14404764057442,1.39310378409594,2.88751792667834,0.118306800039844,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0.866198686566443,0.462985512576611,2.47330397904978,0.790204397959275,0,0,0,0,0,1.17587489739202,0.283550194484773,0.0895585227028483,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0.514137463516618,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49565033836969,8.56459146226377,2.83864347061082,0.819989904948992,0.300946099727719,0,0,0,0,0.347534457872331,0,0,0,0,0.213455115606889,0,0,0.30239029332968,0.248107807818777,3.99001130548962,4.2099014164961,0.128139149255701,1.02341449813341,1.76939313257968,1.48418066444991,0.462629081407967,0.177561725313127,0,0,0.116210378459959,0,0.601519410909855,0.0920809889358963,0.229628896329213,0,0.393373244878272,0,0,0,0,0,0,0.680374821106063,0.647747748306418,1.54227252690289,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0,0,0.384380134730212,0.382838137483752,0,0,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0.316379424718726,0,0,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,1.26377536871694,0,0,2.11300293513511,0,0.282810863907425,0,0,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0.6196469961995,1.40847801266121,0.143411352204052,0.294747123039363,1.426684205925,0,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0,3.26672954583968,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0.593929361665277,1.53580351049616,0,0,0.222617410045812,0,0,0,0,0,0,0,1.55519793830904,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5950057986596,1.19076871422421,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0.233713309847224,0,0,0.50313580350515,0,0,0.302461847526478,0.15543720058278,0,0,0,0.310525913752519,0,0,0.521745061811734,0,0,0,0.363697318405119,0.214821114084977,2.32016879939247,3.58286299828754,1.60011105865261,0.686791410365586,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0.762764190934334,0,0.198916222116275,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,1.18948980281472,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,1.11598505450025,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr15:39874927..39874939,+ | |short_description=p@chr15:39874927..39874939,+ | ||
}} | }} |
Latest revision as of 01:14, 25 July 2015
Short description: | p@chr15:39874927..39874939, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39874927..39874939, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 4.91e-16 | 5 |
hair follicle dermal papilla cell | 1.98e-10 | 3 |
stem cell of epidermis | 1.98e-10 | 3 |
fibroblast | 8.83e-10 | 76 |
adipocyte of breast | 2.22e-07 | 2 |
outer root sheath cell | 2.68e-07 | 2 |
multi fate stem cell | 4.45e-07 | 427 |
somatic stem cell | 7.98e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 4.91e-16 | 5 |
hair follicle placode | 4.91e-16 | 5 |
dermal papilla | 1.98e-10 | 3 |
papillary layer of dermis | 1.98e-10 | 3 |
skin of body | 5.25e-10 | 41 |
integument | 1.32e-08 | 46 |
integumental system | 1.32e-08 | 46 |
omentum | 2.04e-08 | 6 |
peritoneum | 2.04e-08 | 6 |
abdominal cavity | 2.04e-08 | 6 |
visceral peritoneum | 2.04e-08 | 6 |
artery | 4.97e-08 | 42 |
arterial blood vessel | 4.97e-08 | 42 |
arterial system | 4.97e-08 | 42 |
perirenal fat | 1.46e-07 | 2 |
hair root sheath | 2.68e-07 | 2 |
hair outer root sheath | 2.68e-07 | 2 |
bulb of hair follicle | 2.68e-07 | 2 |
organ component layer | 7.21e-07 | 66 |